Contig Data
morexGenes
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Map Locations of contig_63171 (2768 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_63171

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73216 1 1529 bp AK358082 Available Available None
MLOC_73218 1 125 bp MLOC_73218.1 Available Available LOC_Os01g64970.1, FRAME:+2, EVALUE:3e-17, 13101.m07011 protein CAMK_CAMK_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MLOC_73217 1 213 bp MLOC_73217.1 Available Available LOC_Os01g64970.1, FRAME:+1, EVALUE:2e-15, 13101.m07011 protein CAMK_CAMK_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed





CDS Structure of MLOC_73216






CDS Structure of MLOC_73218






CDS Structure of MLOC_73217






Contig Sequence (2768 bp)

>contig_63171 2768 assembly3_WGSMorex_rbca.fasta
GAGTCGTGCACGACAGCGTCGGGGCCTCCCCCGCACGGGAGGCGTCGCGGCGGCCCAACG
GCGTGGCGTACGCCCTCCAGTGCGTGGGGCAGTCGTTCGGCGCCGGGTTCAAGGACCCCA
GCCACCGCCTGGTGCGCGCGCTCGGTCTCCCCGTCCCGTCACCCGAGTCCTTCCTCACCG
AGGAGTTCATGGGGCTGGTCGAGCGGCAGGGCGGGCTCGGCGTGCCCGGCGCCGGGTTGC
TCCTCAACTCGTGCCGCGCGCTCGAGGGAGAGTTCATCCACGCGCAAGCCGAGACCCTGT
CCCTCGACGGCAAACGGCTGTTCTCCATCGGCCCGCTAAACCCACTGCTGGAGCAGGACC
TGGACGCGACCAAGCCCGCCCTGTCGGTGCAGCCGCGGCACGAGTGCATGGACTGGCTTG
ACAAGCAGCCTCCATCATCGGTGCTGTACCTGTGCTTCGGCACGATGTCGTCGCTGCCTG
GCAAACAGATCGAGGAGCTGGCCGGCGCGCTGCAGAGCTGCGAGCAGCGCTTCATCTGGG
TGCTGCGCGACGCCGACCGCGCCGACATCTTCGCGGAGGCCGGCGAAAGCCGGCACGCCA
AGCTGATGTCCGACTTCACCAAGCGGACCGAAGGGAGGGGGCTGGTGATCACCGGATGGG
CGCCGCAGCTGGAGATCCTGGCGCACGGCGCCACGGCCTTCTTCGTGAGCCACTGCGGCT
GGAACTCGCTGCTCGAAGGCCTGAGCCACGGGAAGCCGATTCTAGCGTGGCCCATGCACT
CCGACCAGCCGTGGAACGCGGGGTACGTGTGCGGCCACCTCAAGGCCGGGATGGTCATGA
GGTCGTGGGAGAAGAGCCGGGAGACGCTGCCGGCCAAGGAGATCCAAGAGGTCATCAAGA
GGGCGATGGATTCAGACCAAGGCATCGCCGTGCGGAGTGCGGCGAAGGCGCTCGCCGAGG
ACGTCCGTGCCGCCGTGGCAAACGGTGGCTCGTCGTGGGCGGACATGGAAGACTTCATCG
GTTGCATCACAAAATGAAGGATTGGCGTCGATAATAAATCAGATGACCAGGCATGGTTTA
TTTTGCAGCGTCAATCAGAACATTTCTCGTGTGTGATATGAAGTGTCTCTAGTGTCTCGT
TCGTAGATTTGTTTCCTGTCTTTTTCGTTCGCTCCATTCGGATTCACGAAAAGAGTACCC
TGAAGCCCATCCGTCGCTGCAATGCAATACAGTAGCATGCAGTTGATTGGTCCGTGTGAG
CACTGGACCCGGTTCTGTTTCAGCGTTACAGTGTAAAACAGTGCTGAAATCACTACGGTA
CATGAAGAATTTCAATGCCAAGACCTGGGAGACAGGCCTTGGATGTAGGTCCGTTACTGG
TACATTCTACAACTGTCCCGAAACGTCTGGCCAGCGAGCATACTCTGTCCATATTTTCCG
GCCGGTCTGCACTCCACGTATACCTAATTCTTCATATATGTTGAACGGACATAGTTCATA
TGTTGGACGAATATAAAGATGTTGGGACGCGTTAGCCATATCGAATCTCCACTAATAATA
AAACACGGACCGCTTCTGCCGTCCGTCGTGGTTTTTTTATGAAAAAGTTCCTTTATTTTT
GAGTATTCAACCCGCAGTTCCTGATTAAGTGAAAAAAATAGATTTGCAAGAAAGCCCCTG
GCCCCCGGATCGGATCCGCCTCACTGCCGCCAGGGCCGCCCCGTGCCAGCCACCCCCGCG
CCTCCCCCAGCCTCCTCCGCCCCACTGCCCCTCCTCTCCACCGAGCGGCTCCTCCTAGCA
CCCGACCACATCCCCGCCGGCCACCACGTCGGCGATCGGCGATGACGACTGCCACGGCGA
CGGAGACGGCTGCGGCCCTGAATGAGGGCGCCCGCGCCGGGATGGACAAGTACGAGGAGG
TGCGGGACATCGGGTCGGGAAACTTCGGGGTGGCCCGGCTGATGCGCAACCGCGAGAACG
ATGGGCTCGTCGCCGTCAAGCTCATCGAGCGCGGCCACCGGGTCGGCCTCCTCGTTCTCC
TCAACAATTAATCGATTCGTGGTTGCTCCGATCCGGGGTTCGGTTTGGGCCCGCGTTCCA
ATCCGTCCTGATCTTCAACCACTGCTCCCTTCTGCACCCCAACATCATCCAGTTCATAGA
GGTGCGTCTTCCGGTCTTCCCTCCCTTCGGCACCCCAACATCATCCAGTTCATAGAGGTG
CGTCTTCCGGTCTTCCCTTCAGACTTCTCGAAAGGGAGCAGCGAGCTGTAAACTGTTTAC
TACTGTATCTGCCTTGTCCCTTTGTGTTTAATCTGCTGCGCTGTTACTGGACGGAAACAT
TTTTTCACTAGAGTTTGGACGGCGGCGTGAATAACTGCCAGGGCAAAAATTTCGATTCTT
CTCCACTACTTCGTCACCAAGGTGTTTCCTTTCCTATCTCAAACTGACAATCGCAAGTGC
TTGAAAAATTCGACAGGTGATCCTCACACCGACACATCTTGCAATTGTGATGGAGTACGC
GGCCGGCGGCGAGCTCTTTGATCGAATCGTTGATCGTGGGCAGTTCAGCGAGGAGGAGGT
CACGATTTACAACCCTTCTTTCTATCTTCTTTCCCCAGCACAATTTCGAAATCCAGAGTG
AAATTTGATGTTGAGCGTTCTCCCCCCTCTGATTGCTGCAGACCACATATTTCTTCCAGC
AGTTGATCTGCGGCGTAAGCTACTGCCATCACATGGTATGGAGAAGCAATAAATTACTCT
CATACTAG