Contig Data
morexGenes
Links



Map Locations of contig_63154 (6313 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_63154

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73207 3 1980 bp MLOC_73207.1 Available Available LOC_Os05g34980.1, FRAME:+2, EVALUE:0.0, 13105.m03650 protein amino acid transporter, putative, expressed





CDS Structure of MLOC_73207






Contig Sequence (6313 bp)

>contig_63154 6313 assembly3_WGSMorex_rbca.fasta
TTCCGAAACCGGGACAGAAGGCCCTTATGAACGGGACAAAAGTCCTTTTTCTACTAGTGT
TATCTGGCCGAACTGAAAAAAGGTTTAACTAAAAATAGACCAAAAGGTCACCAAAATGTT
AAAACTGCTGGTAGATTAGTGCTTCTCATTAGTTCTGATCTATGCACTATTTTAGTATTC
ACCCCGCATAAAATATTCATTCATTTATCATATATACAGAATAAAAAGGCACTGCAAACC
TACTATAAAGACAACAACTCAGAATCGCACTCAAAAACATCATCTACGACATGTATCAAA
AACATCCCTGTGTTGGTAGTTTAAATATTTAGGAACATAGGTGGTAGCAGTGACATGCTA
AGGTACACAAAAAACACGAAGACCAACAATAAAAAAAACTTAACAATGAAATACTGAATA
GAGCAAAAAATACTAGCTACAAAATAAAATAACGGCATCACTACAATGCACATGTTGCCA
CTTTAGTGAACATAAAAAAGATAACTAGAGTTTACTCTAGAATCTCTCATTACTGAACAC
CGCCTACTGAAAATAGTGCATATATGTTGCCACTACTATTCCTTTGCTATTACTAAACAC
TCAGACCACTTTAGTGATCATGATGCCACTTCAGTGAACCCACTATAAAAAAAACTTGCA
GAAGCACTATCCTACTGAACATCAACCTAGAATATTTCATTACTCAAAGAACTAAAAAAA
CATATGTACAAAAACAGAAAAAAAAATGACCAAACGACGCATTCTACGGCTGTGTCATAA
AAAAAACATAACCTAGTTTCTCACATTGTAAAAAGAAAATATTACTAGAGTCGAAACATC
TACTGAAAATAGCCCCTACATAACATGTGTTTGCATCAGGACCTACAACACCTACTTCTA
AAAAGGAACTAAAATGGGCTAGCAAACCCACCATCCCTGAACAAAGGGACGAAAATGGAC
TAGCACACCTATCTACAAGTCCTACAAAAAAAGAAAAAAGTGTGCAACTGAAAAAAAAAA
TGTTACTTTCGAAATGAGATAACAAAGGGAATCCCATCCACCACATCCATCAAAAATCTC
TTGTTCAACCCTGTGTCAACCCTAGTGACAAAACCATATATCAACCCCTAATCCCCTCCC
CTCCCCCTCCCCCTAAAAGAGACAAATCTACATCAATCCCTAAACAACCTCTCCATTCTA
TACATCACATCTGCACTAACCCTAGAAATGACTTACTTGAATAAAAAAGAAAAATAACCT
TGGGAGAAATGCCTTACTTAAATAAACGGGACGCATAAAACGGCAAACTCCTCTCCCCTT
TCAGCTCTCGCCCTTCCAGCGATTCTGTAGATGTGAGGAAGACGAACACATGTGATGTGG
GGGATGGGAGACACAAGACGGAGATAAATGGATGATTCGGGACGCTTCGCCTAGCCGATC
CACCGAACGGTCCGAGGTAACTGCAGAAAACGGGCCGCTCCAGGCGAGCAGAAACGGGCG
ACGACAGACTTAGACAACGGGCAAACACCTACAAGCACGAATCGCGGCGCGAAAAAAGAT
CCAACGAGTGATAAGGTGAACGCGCCCAAAACTGAAACTCGGCTATTGCTATCTCTTTAT
TCTTTGTACTTACCATGGTACGATGAATAGATTAAAAGTTTCTTAAAATAAAAAATCATG
GGTGGCTTCTAGTTTTCTTAGCTAGACTACCTGACTCTTAAGAGGTTGTTAATTCAGTCT
TCATCAACTAATCACTCTATTTCTCGAATTTAAGCTAGTCCTAGCTAGCTAGCACACCGC
TAATACTTTGGTTGCTCATTGCAAACATGAGACGTGTACAGTGTATGCAGCAATCAGCGG
AGCTGTTTTGTTAAGGTCCCTGATTGGCAGGAGTTCTGGAGAAGGCCACAACAACAGTAA
TAGAATATGTTCGCCCCACACACAAATCCAACTCAAGCATATACCATATCCAACATTTCA
CTTCTCACCGCTAAATTACCTCTGTACTTGCCGTTAGGAGCCACACATTTCGACGTTTTG
CAGAAAATGTGAGAAACCATGGGCACGAAGTCTTCCCTATTTTTCACAATCTATCCGGGA
ACAAGATCGTGATACGATCCCTAGTGGGCGATCAACTTACTTAATCTCGTGGCCGAGAGG
AGTACCGAACATATTCTAGGCCGCGGAAAAAAGGATGGTCGAGAACCTGTGGGGTACAAA
CACCCAAGGGCCTCCCTTGAGCCTTGAAGTGATAGTATAGTACAGTATCATCCAGCCATG
CATTGAACATGGAACACGCCAGACACACATTGTGCACCCTAAAGCCAGCCCTGCCCACCC
CTATAAATACCGTGGCCATTGGGCACACTTGAACACACCATCACAGCAAGTTTAACCCCA
TCTCTTGACACAACACTTTGATAGCCCTGAACTTTCCTCGTGACACTCTCTTGCAAGGAG
AGAGGTGGTCAAGGAGAGGATACTTTTTGCAAAGGTAAGAAAACGCAATGCATGCATCAA
AAGATAGATAGTATCTAGTAGAGCATGCACTGTTGCGATCTTATCCTATCTTTGGTGCAT
GCAGCTACCGCATAGTTTGTTGTCAGAGATTTAATTCCATTCCATGGCCTTAGCTTGGGT
TATGACTTATGAGTACCCTAGATATTTGATGATCTTGCGTGGGAGCATGCATGCACATGC
GTGCAGGTGCAGGTGTCATCGTTTTCAGTCGGGCGTGTGTAACAACTTGCTAGCGAGGTA
GGCACGCTGTTCTCGCTGACCAATGCAGCTATAGCTACAGTGAGGAGACAGTGCAAGAAG
CAAGTTGACATGTGTGCCCGGAGACAATAGAGAGGAGGGGTCCAACCATTACACCGATCG
GCCACGTTTTTTTTTCCTTTGTGCCACTAGCTAGAGGAGTGTCGCGTGGTCCATCCTTTT
GCAAAAAACCCTGGCCATCAATTCATGAAACAAATTTAGCTGAGCAATTTTCTTTTTGTT
TTACATTGGATTTTCCTCATAGAGATATAGTATGTCCCAATAAACAACAAGTTTGCATGC
TACACCCATGCATGCATACCACTTGATCTTTGAGCTATCGTATATATGTAGTGTCTACAC
TTCGCAAAAAAAAAAAGAGCATATGTAATGTATACATACGCGATCATCTGACCAAGTGGG
TGAGACACGCATGACATATTCTTCTTCGCATAGTAGAGGCATCAAGCAATGCTCTACCAG
CCCATAACATCGGCTTCAACTTAAAGATCGCCGAGAACAGATGCTATATACCCATGGGGG
TACGCTAAAAAAATTCCCTAGAGCATCCCCACTTCCTCGAGCCCAACCCGAATGAACACC
CACCAACCTTCCAGGCAGGCGCCTATAAATTGCCGCCCCCACTCTCATCTCTTCCTCACA
CTGCACTCGCTCGCCCCTTCCCTGATCCGTCGCCCACTATACCACCTTGGGTCGATTTAG
TGGAGCGGTAAACCGGCCGCCTTTGAATTCCACCCCGCGTCCCGCTCCCTACCTCGTCCT
CGTTGACGTTGTAATCGCGGTGCTACTTACCTAGGTGAGGTACAACGAGATATAAATACT
GCTGCTGCGACTATACATAGCGATCGAACTGTACTGTGTGCTCTAGCTGTGGTCTCACTG
CTCGATCGGGTGTTGTGGCTGGTGCAGGAGTGAGATGGGGCAGAACGGCGTGGGCAAGAA
CTACTATCAGGGGACGGCGGCGGCGGCCATGGAGGTGTCCTCCGTGGAGCACGGCCAGGC
GGCGGCCTCCAAGTGCTACGACGACGACGGCCGCCTCAAGCGCACCGGTAAGGACGGAAC
TGATGCTACGCTAGCTGCTCGCGCCCGTGTGCTGATGCCGCGTACGTACGTGGCGTGATG
AACTGACGTGGACGTTTGGTTCTTCGGCGTGCCGCAGGGACGATGTGGACGGCGAGCGCC
CACATCATCACGGCGGTGATCGGGTCCGGGGTGCTGTCGCTGGCCTGGGCCATCGGGCAG
CTCGGCTGGGTGGCCGGCCCCGCCGTCATGCTGCTCTTCTCCCTCGTCACCTACTACACC
TCCTCGCTGCTCTCCGACTGCTACCGCTCCGGCGACGAAACCACCGGCAAGCGTAACTAC
ACCTACATGGACGCCGTCAACGCCAACCTCAGTACGTCTGCATGATTGCCACTGTTCACC
GAGCTCGTGTAATTTGCAGCTGCATGCATGCATGCATGCATGCGGAGGCAGCCTAGAGCA
GAGCTCACTCTGTTTCCCTCTCCTGTGGATTTCGTCGAGCAGGTGGCATCAAGGTCCAGC
TCTGCGGGTTCCTGCAGTACGCCAACATCGTCGGCGTCGCCATCGGATACACCATCGCCG
CCTCCATTAGCATGCTGTGAGTACCCAAACTTTCTGCAACGATGATCTTGATCTGTGGCT
GCTGGTGAACGTGAACTTACCGGTGCTTGTAACTTGCATGCAGTGCGATCAAGAAGGCCA
ACTGCTTCCACGTCAAGGGGCACGTGAACCCGTGCCACATCTCGAGCACGCCCTACATGA
TCATCTTCGGCGTGGCGGAGATCTTCTTCTCCCAGATCCCGGACTTCGACCAGATCTCCT
GGCTCTCCATCCTGGCTGCCATCATGTCCTTCACTTACTCCATCATCGGCCTCAGCCTCG
GCATCGTCCAGGTGGTCGCCAACAAGGGCGTCAAGGGCAGCCTCACCGGCATCAGCATCG
GCGTCGTCACGCCCATGGACAAGGTGTGGCGGAGCCTCCAGGCGTTCGGTGACATCGCCT
TCGCTTACTCCTACTCCCTCATCCTCATCGAGATCCAGGACACCATCAGGGCGCCACCGC
CGTCCGAGTCCAAGGTCATGCGCCGCGCCACCGTCGTCAGCGTCGCCACCACCACGCTCT
TCTACATGCTCTGCGGCTGCATGGGCTACGCCGCCTTCGGCGACAACGCCCCCGGGAACC
TCCTCACAGGCTTCGGCTTCTACGAGCCCTTCTGGCTCCTCGACATCGCCAACGCCGCCA
TCGTCGTCCACCTCGTCGGCGCCTACCAGGTTTACTGCCAGCCCCTGTTCGCCTTCGTGG
AGAAGTGGGCGCAGCAGAGGTGGCCCAAGTCCCGGTTCATCACCGGAGAGATCCAGGTCC
CGCTCATCTCCTCCGGCTTCAAGATCAACCTCTTCCGCCTGACGTGGCGGTCCGCGTTCG
TGGTGGCCACGACGGTGGTGTCGATGCTGCTGCCATTCTTCAACGACGTCGTGGGGTTCC
TCGGCGCCATCGGGTTCTGGCCACTCACCGTCTACTTCCCCGTGGAGATGTACATTGTGC
AGAAGAAGATACCCAAGTGGAGCTCACAGTGGGTGTGCCTCCAGCTGCTCAGCCTCGCCT
GCCTAATCATCACCATTGCTGCCGCCGCCGGATCCATCGCCGGGATAATGTCCGATCTAA
AGGTCTACAAGCCTTTCTCCACGACTGACTGATCGATGCCTGGCCGTCGCATGAATGCAC
AGATCCTCGATGGACAGAATATGCCTAAAAGTTCTAATTAATTAATCAACCAATTATCAC
ACGTTCGCTGAAAATTGCAAGTTCAAGTAATTGTTGCTTCCAAACAGCCGGTGTAACACC
GGTGCTGATGATTTCATTTTCCTTTGTTTGCAATCCATTGTGTTAACTGAAAAATGGTAG
AGAGGAACCAAATAGTGTACTTCCAAAGTGGTGTGATTGTAAGTACGTTATGAGAAACGA
ATGTTCTTATGATAATTACTCCTTCAGTAGTACTCTCTCTACTTAAATACTAGCTTGTAG
TTGAGAAAATTAGACTATTTTTTTCCAACAAGTTTTTAGGTACAAAGTGAGTATTAAAGA
TCATTATCCAGATGAGCCTGAGTTTCTTCTTGGTATCCATCACTTTGTCTGGCTGACACT
CTATATCTGCTTTACCTGCCTTTTCTAATAATTAAATGGACAAATTATTTATTTTAACTT
TGCACTACTCAGTTTGCCTGAAAAATATTGGCATGGATTTATGGCGAAAGGAATAAAAAC
AATTTGACAAAGAGGGTAGGCTTACATGATATGTTTTTCTAAGTTTCAGATCAGCTCATT
GTGTCGGACAGTCGAAGCACCGTCCTCTAGACATTTGCACCAACAAAACAAAATAAAGTG
ACACCAAAGGCCCGAATCATAATAGATTATGATAATCTGAATTATGAAGATATATTATAT
AATCTGGTTTATAAAAATAATCTAGGTGAACATGTTTGAAGGCCAGATTATATAAACTGT
AATCCAGGTCTTA