Map Locations of contig_63149 (8298 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_63149

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73204 3 1725 bp MLOC_73204.3 Available Available LOC_Os01g60770.1, FRAME:-3, EVALUE:3e-138, 13101.m06469 protein expansin precursor, putative, expressed





CDS Structure of MLOC_73204






Contig Sequence (8298 bp)

>contig_63149 8298 assembly3_WGSMorex_rbca.fasta
CCAAGACTTGGAGATCTTCCCTACAATGGACTTCTCCCGAAGGTCCTGAACCGTCATACG
ACTCCCGACCTCGCTGGGCCAAGGCCGGAACCACTTGGAGATGAGTCGCGAGCTTGGGTG
ACCCGGCCCAACTAGGNNNNNNNACCCAACAGATAATATCCCCAACATAGATGCAGATAT
AATCTAACATATACCTGATAGTAGATGAGTAAGTCGTGTTCATTGTGTGCCTAAGAATGG
ATGAATTATTGTTGTTCCTAATGATAAAAATAAAATTATGCGGAAACAACTTATTGTCAG
TTATATGATGTGCATTGATTTTAGCAAATTAAATAAAGGTATTAGGAAGGAATATTATCT
GTTGCCTTTTATTGATCAAATATTAGAAATATTTTCGAAGGATACACACTTGTTTATCAT
GATGGTTATTTTGGTTTCCCTTAGTTTTTTATCCGGAAGATCAAGAACAAACAACTTTTA
CTTGTCTTTTTGGATCTTTTCTTATGAGTGTATGCCTTTTGGTGTATGTAATGCACTTGT
TACCTTTAAAATATGTATGACTACTATATTTAATGATTTTTGTGAGAAGACTATCGAAGT
AGTCATGGACGATTCTATTTCTATGAAACTTCTTTTAATGGTTGCTTGCACAGTCGTAAC
AATGTTTTACAGTGATGTGAGGAAACTCACTTTGTCTTGAATTGGGAAAAGTGTCACTTT
ATGATGAATGAAGTTATTGTCCTTCGGCATAGAATCCTTGAAAGAGGTATCGAAGTTGGT
AGAGCTCAGGCTGAAGTTGCTGAGAAGTTGCCTTGCTCGTCACATATTGAAGGTATACGA
AATTCTCTTGGTCATGCTGGTCTTATAGGAGATTTATAAAAGATGTCTATAAAATTTCTA
GACATCTTTCCAATATATTATTTGGATGAAAATAAGACATCTTACTAGATAAAAATTCTT
TTTCGGTAGTAGCATTGTAGGGAAGCCTTTGAAATTCTAGAGAAGGCTTTATTCTGTGCT
CCTTCAGTTCAACCACTTGATAGGAATTTAACTTTTGAAATTATGTGTGTCGTTCTAGAT
TATGATGTTGGTACTATTCGTGGGAAAAGAGTTGATAATAAACTGAAGGTAATCTATTAA
TTATTTTAGTAAAACATTAGAGAATGCTCAAAGAAACCATACTACTACTTGAAAATAATG
TTTAGTTATTGTCTTAGCTTGTGATACATTTAGGTCTTATATTTTTTATTGTAAAGTTAC
AATTCATACTCATCATGCTACTATCAAGTACCATATAAAAGGAAATATGCTAAGCATTGG
CTTATTAGATGGGTTATATTGTTACAAGATTTTGGTTGGCATATTGATGATAAAATAGGG
GTGATGATCGAGTGGTTGATTATTTCTATAGAATGGTAAACATCCATATTGATCATATTC
CTGTTAGTGATAGTTTTCCTCATGAGCAACGCAATGACTCGTAGTTATATGAGAGACGAG
GGTACTTTGCCCGGTTGAGGTTTGCATTCATGGATATGAATTTGGGGGTAAATATAGAAT
CTCATTTGAACTTAGGTAAATTCCATTCAAATATGGAAGTGGACATGACCTTTGCTCTTA
GTTATAGCTTTGGGTTCAGTTTCAATTAAGAAATAACCTAAGGGCTTCATTGCGAAAGTA
CAATTCAAAAAGGAATTGTAAATGCATTTAAATGACAATAGATAAATGAAATTCAAACTT
TATGAATATAATGTATAATAAATAAATTATTTTATTTAAAGTAATACAATTATAGTCTTG
TGATTACATAACGTGAGAGAGAAACAAAATGAAAGAAGAAAGGAAAGAAAAATCTGAACT
AAAGCCTAGTTATTTCTAAACTATCTATTTCTATAGGATATTCATTTAATCTTCTTTTTC
TCACCTACAAAATAAACATCAAAGATGAAAGAAATGATTAATGATAAAATGTAGCATTCC
AATATGTGAAAGTGAACTGAGTTATGAGATAGCACTTTGGAACTTCGACAATCAAAGCCA
AAATCTATTAATTTTAAATAGTACTGACAAATACCAATTAGCAAACTATGACAGACCAAA
TAGACAACCAAATCACCAATGGAACAGTAGATTCCCTAATAACCAATGAAAACAGTAGGC
AATAGAGCCAAATGATGAACTTTCAGGAAAGAGATTAATCTACCAAAGCCAACAAGAAAG
ACATTAGCACTTACTCACCCAACAACTTAAGAGCATAGACATCGAGGTGAGCATGACATC
ACCCAAGCAGTTGTTGTCAGGATTGCAATCACTAGAGCACCACATACCACCCATACAAAC
GACTTACTCACCAAGGGGCAGCTGAGTCAACTAGCTCACGCGAGCCATGCAAGGGGCTAA
CATAGCCTATTAATGGATCAACCAACCACCATCATCCTACCTAGCAAAACCATGTACAAC
AATACCAACCAGGAGACCACCAAACTGCTACAAATCAAGAAGCTAGTAGGAGCCGAGATA
TCCCAAGAAAAAGGCTCAACAGAAACCACAAGACGAAGCTTTAGGGAATATCACAAAGTA
GAATTTGGAAAGTAGAATCCTTAGTATGGAGCAGAGTTGCTACTCTGCTCATCTTGGGAT
TTATAGGAGCATTGTAGAATCTGTATGACTCTAGTGAGAAGACCCGGACTACAGTATGAT
CAGTCGACTAAGCAAAAGCGTTTTCCTTTTTCTTCCACGTGACATAGGACAACGGGCAGC
TGATTGTCAGTTGACGCCATATCATATTATACTTAAACAGTTAAGCCATAACCAAGCATT
GTTCATGGTCTCCAAAATAACAAGTGTGCCCCCACAAACATCTCCCAATCATATGAAAGG
ATTCGGGGGTTACAACGCAACAAGAGAAGTTACAAGATACTCTCACACACCACACACCAT
TCCATGCATGTATTACTAAAAGTACACTTAAATAGATCACCTTGCGGTGTTTCCACAACA
CAAGGCTACACTAACAATGATCAAAATGCTCAGCTTCACAATGATAACTTATTTATCTCT
ACGATAATGTCCTACTAGCATGAGAGAAGGAAAGGCCTAAGCGGGTGCTGATCAGCAGCA
GCCTCAGAATAGCCGAAGGCCTCTTCTGTAGTATAATAACGAAGAGGTTTCCTTCTTCTC
TTGCTCAAGCTCCAAACCAATGCGTATGATAGAAGAAGACATGAGCCTCGCTCGCTAGAA
CTGGCCTCCTTCGAAGGTCTGTCCAAAGGACCAGCCGGCCGGGGCGGCGTTGTTGCTGGT
GACGGTGCGGCCGTCGCTGAGGGTGACCCGGAAGGAGAGGCTCTGGCCGTCGAGGTCCGC
GTTGCTCTGCCAGTTCTGGCCCCAGTTGCGGGACATGGCCTGCCACCCGGAGCTGGACCC
CTTGATGGAGACGGACTGCACGTCGCCGGCGCCGGCCACGTTGGTCACAAGCACCAGGTT
GAAGTAGGAGTGGCCGTTGATGGTGAACCTCATCCCGCCCTTCTTCACACAGGGCACCCT
GCAATACAGTCGGTGAAACAGAGATGTTCAGTTAAATTGCGACTTGCAACTTGCAATTTG
CAGTATCATGGTCGAGTGAGCGTGACGCTTAAACTATTTCAAAACAGCACCGAGAGTTGC
TGTCAGACCAAACTGCACCAAATCTGCACTCTGGCCCACCTAACATGGTCGACACCGACA
ACGGACCAGATTAAGTAAATTTGTACTCCATGCGAAAAGGTTTGTAGACGACGGTCGATC
GACATCGACTCACCTCCGGTAGGAAACGGGCACGATGCCGGCGCGGTAGATACCGATCTG
GAGGTAGGCGGGCTCTGCCATGTCGAAGTGGGCGCGCGGCGGGTTGCACCAGCCGCCGTC
GTCGTTGGGCAGCGCGTAGTTGGGCGGGCAAAGGTTGGTGGCGGTGATGGTGATGCTGCC
CGGCACGCACGAGCTGCCCTGGCACTTGAGCTCGTAGCACGACCCGCACGCCGCGCCGTC
GTTGAACAGCGCCGTGCTCAGCGCCGCCGTGTTCGTGCCGTAACCCGTGCTGTACAGGTT
CCCGTAGCCGCACGCGCCGCCTGCAGGACACTTCAGTTAGACATGTCGGGAGCCACACAC
ATACAGGTAGCTAGCTAGGTGCTTTTTTTTCGCTTCAAGGCTGTACACTCATGATGAACT
CACCCATTGTGCCGGACGCGTCGCCGCCGCCGTAGAAGGTGGCGTGGGCGGTCTGCCACG
AGCCGTAGTCGCCGGCGGCCCGCCGGGCGAGGAAGCAGAAGGCGGCCGAGAAGAGCAGGA
GCAGAGCATTGGAGGAGGCCATTGCAAAGCGCCCGAAGCTAGCAGCTGCTGCCTTTCTAG
CTCGGTAAAGCGACCGACCGAACTTGCTCAGGAACCGATGGAATGGTTGCTTGGCTGTGA
AGAGAGAGTTGCTACCGGCTAGGTATTTATAGGCGAACTGCCGAGTGCTCCTGGCCGTTG
GAATCGTTAATCGCTTTGCCGAACGGCGGAGAACAGGGTACAGGGGACAAAAGTCGGAGA
AGGAAGTGGGGACTGCGTATCCATCCGTCCCCGGCCCCGAGCCACCGCCGACCACGAGCG
GCCACGACGGCGGTTAGCACATACGAATCGCGCGCACATGCGGGTGCTGGTCACCGCGGA
CGCTTCGCACAACGAGACAGCAACTGGCCTGGTCGTGTGCGTACCAATTCATCGCCAGAT
TAAGCTCGCCTGCCCACATGGCTCCCACGAGCTACAGGCCATGGATTTCGCAACTGGGGA
GGAAGAAAACAATATGGATCCTGTTCATTGATACATAACCATAAAATAAATCAGGTTAAC
CATGTGATCGTGTGAACCTGAAGGGCGTATACCACGAATCCGTCAGGATCAAGATGCTGC
TAATGAATTATTGCGCATCCAGAAGCTATGCGTGCATGTTCGGGGTCGCCCTCTGGTAAT
TCACGTATAGAGTAACATGCATGCCATGCCATGCCAAACTTTTACTGCGACGTGTGGCAG
GGACAGGATGTCGAAGTCGCGCGCAACAGTTTGATGTGATGCGACGGAATTCGATCGAAA
GCCGAAAGCAAATCCAATTGTTTAGTGATGCTCAATCCATCAAGTTGCACATAGATTAAT
ATGAGGAACGGAAAGAGGAGGCATGACAACCAATCGTCCCAGAGTGTGAAGCATGTTCCT
CCGGACGCCTTTCCCCTTTCCAACGGTGGCGAGGAGCTTGCCCCGAGATTCGAAACTTGC
GTTCTTCAGTTAACCTTTCGTTTCGTCGGTTATAACCTCCGGCCACCCGGAGCCGGTAGC
TCCACTAAAGTTATATAAACCTGAGATCTGCCTGTCGGGTGTGGAAACCACGGAAGGAAC
ATCGGATTGGACACGCGAAGCAGGGAGTTCTGGTGCTGGGACAGATTAATCTAACGAGGT
TAAAATGCCACTATCCTAGCACTAGCAACCTGCATGCACGTCACTACCAGTCCAAGACCA
AATGATAAGTTCCGAGTTTTATAAGGCATAGTTGGCTGATTATTAGGGTTCTCGACTTCA
CATGCATGAACATGGCCACGTACGTAAGCGGACAAAGTTGTACAGAAATCGGTATCTTCA
GACCAAACTGCAGATGCAGAGGTGCTGCGGCCTGCATGCGCATGCAGGTATGTCATGCAT
GTACATACAAGATCTCGTTTGCTAGCGCATCTCCCGTCCTGTGCGCCAAGTGTCAAACCG
ATCGGTGGCTGCAATCAATGCACCATCTCTTGCTCCAAACCACGATCTACTCTCATTGTT
ATATGTCAATGTTGCTATAAATTAAGCAGGTAAACCTTCGTGTAATGTACAGGAAACGTT
GGTTAGTGGCCACCCAAATGGAAAAGAGACTTTGGTGCACCGGCTGACTTGCTGCTCATG
CTCCGCACGTTGTGTAATGGACTTCTGTACCTTCCTCTTAGTTGGTTGTGCCTCACTGCC
CCGTGCTTGAAACGCAGCATATAGCATCGTTTCACCTTCTCAATTGGTACAAAGTCACCC
TTCATATGGTAATTATTTGCCCTGGATTTGTCTAATAAACAGCCAAGTATATTAGTATAA
CTGAAAAACACGCGAGCATAACAGGTAAACGACTTAGAAGCGTCGGCGTCTCATCATCAT
AGCGTGTTAGTAGAGGATATACAGGGGGGGTCGCGGTTAGCTTTCCTGTCATAATCTGTG
GCTTTCAAAGATAACATGCGCGCCAAGCGCCACGCTTTCACAAAAGCAATACTAGTCTCA
CTCTCACTCTCACGGCGGCAGCGACTAGAACTAATTAACCGTCTATTTCCTGGCCCCCAC
GACGCCATGTTACCCGCACATGCATCGGCCGCCCGGCCATCACGGCCAATCTCCTGTTGC
TGGAGGATTCGCCTTATCTTGGAAGCATTCCATAATTTCCAACATCATCAAGCCGCTTCA
TGATTTTTAAAAGTGTTGTTTTTTATTAACACTGATGATCGAGTGAGCCCATGCCAGGTG
TTCTGTTTGTGATGCTGCTGGGTGGTGGAGTGCTGGATCTGGGTCGGCGGTGAGGTAGAA
CAAGCTCTGTCTTCCGACAAGCCTAACGAACAGTGGGGCTTGCATTGCACGGTGTAATGT
GTTCAGCTTACATGAGCTTAGAAAGTCTGAAACCTTCAACAACTATTGCAAACTTATGAT
TTCAGTTACTGGTGGTCGTTCTGCCCAAAATCTTTTTTTTTAGTTTTTATCCTTTCTACT
ACTGTACATAAATGGCACAAAGACCCTTTTTCCACAACAAAAACATAACATGGGCAAAAG
CAGAGGTAATCTGAGTGCATGCTTCGCTCGGGCGAATTAGGCGAACCCTAGTTTTCACAC
TTTTTTTAATACATGTTTTCGCCCCATTTTATAAATAAAACAAATATCATGTTATGACAG
CCAACCTATTGTTCTTATTCCCAAGGTGGATCAACCATCAAGTTTGCGAGAACTTCGGCC
TATTAGTCTGTGTACTGTGCTTCATAAGGTGATTGCAAAATGCTTAGCTAACCGATGGAG
GCCAATACTTGGTGATATTATTTCGATGAACCAAAGTGTGTTCATCCCTCAAACTCTTAT
AACAGATAATGCGCTGGTGGCTTTTGAGTGCTTCTATTTTATTGAGCAAAACACAAATCC
GGGTAAGAATTTATGTGCTTACAAAGTTGACCTGTCAAAGACATATGATCGTGTGGACCG
GGGTTTCCTAGAGAAGGTGGTGAAAGGCCTAGGTTTCTCTCACCGATGGATTGGTTGGAC
CATGCCATGTGTGACCAGAGTGAGCTACTGAGATAAATTCAATGGAACCTTGCTGGATTC
GTTTATCCCTACTCGTGGTGTGCGCCAAGGCCGTCCCTTGGCGTCTTTCCTATTTTTATT
TGCCGGAGATGGTCATTCAGCTTTCCTAAAAAAGAGATCAATGATAATCATATTGTGCCT
TTGAAAGTATGTCGTGGGGCCCCTCATATCTCTCATATGTTGTTCACCGATGATATATTG
CTCTTTTTTAAGGCACAGGCCGAGCAAGCCTTGAGGGTGCAGCAAGTGATCAATTCATAT
GTGCAATGGACGGGCTAGCTGGTTAATGTTGATAAATGATTTATGATGTTCGTGAAAGCT
TTCCCAAGTGATGCACCAGAGGAGGTTGTGCTACAGGTCACACAAGTAGAATTCGAGCCA
AAATATTTGGGGCTCCCAACACTAGAGGTCCGGATGACATGAGGAAAGTTTCAAAGCATT
CAAGAGAAGCTCCTAAAAAGAATGGTGCACTCGGGTGAATTTATTAGCAGTGGAAAATAA
ACCCTTATCAAGGCAGTTGTGCAATCCTTACCAACCTATTTGATGGGTGTCTTCAAACTT
CCTACGGGTCTATTTGAAGACCTTATGAAAATGATAATGGAGTTTTGGTGGTGTGCTAGC
AAAAAAGATGATGCACTCATTGGATCTCTTGCGATTGTATGATCATGCCAAAAGCTGCTG
GTGGTATGGATTTCCAAGACCTACAGCTCTTCAACCAGGCTTTGTTGGATAAACATGCAT
GGAGATTAATTGAATATCCTCATAATTTATCCGCCAAAGTTCTGAGGGCAAAGTTGTTGG
AGAACGTTGCATGAAAAACAAAAAAAATTCCTACGCACACGAAGACTTGTCATGGTGATT
TCCATCTATGAGAGGAGATTTGAATCTACGTACCCTTATAGATCGCACAACAGGAAGCGT
TGAGAAACGAGGTTGATG