Contig Data
morexGenes
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Map Locations of contig_63136 (4108 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_63136

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73197 2 1203 bp MLOC_73197.2 Available Available LOC_Os09g37060.1, FRAME:-3, EVALUE:9e-29, 13109.m03669 protein transposon protein, putative, unclassified, expressed
MLOC_73198 1 1384 bp AK368356 Available Available None





CDS Structure of MLOC_73197






CDS Structure of MLOC_73198






Contig Sequence (4108 bp)

>contig_63136 4108 assembly3_WGSMorex_rbca.fasta
TCGCACACACGCAACTAACACGCCCGACCAGACGTGCCTCCCCCGCGTTCGCTCCCCCGC
CGGCGGGTGTTGGCCTCGGCGGCCGCCTCGAGCCTCCGCCACCGCGCGTCGCGCGCGGCG
GCCCGGGCGTGGGCCTCGGCCCGGTTCGCGGCGAGGTCGGCGGCGCAGCGGTCGTAGAGG
TCGGGCGCTACCTGCTGGAGCAGCGCCTTGACGCTGGCCGTGACCTGCTGCACGCACTTG
CTCCAGTGCCGCTCCAGGTTGTCCTCCACGCTGGCCACGAACGGCGGCAGGATGCGCTCC
ATGGCGCCGCCGGCCGACGCCATCTCCAGGAACCGCTCGTTGTTCCACACGTACAGCGCC
CGCTCCGCCACCTGTGAAAAGTGGAAATCATAAACGCACATTTTTTTCCCTCTCGTTCAG
CCCACCACCCATCACCTCACCAAAGCATTCAAGTGATAGCACTACGATTAGCGGCAAGGA
TAGGGCAATTATCCATTGGCTGGATTGCACGACAAGGAACGGTCAAATCATCGCCTTTGC
AAAGCCGCCCGCTTTGCAAAGCTAGTTGGTAGTAACGCATTTCAAAGTGATTCGGCTGGA
GGCAGGGTACCACAAGTCCACAAACACCACATTTTTGTCCACTGTGAATGTGGGTGCAGT
GCACGGTGGAGTTGGCATCGGGCATGTGACGGCCATGTTCTGTTCGGGAGCCGCATTCCC
AGGCGGATTGCGTTGCGTCGGGACTGAAAGACGGGCCAGAGAAAGCGAGGTCTTTGAAGC
CGAATAATTTGAACCGCAATGCACCAAGTCGACAAATTGACATCGCTTTTATAAAGCCTC
TTTTTCGCTCAAACTTTCGATCAACTACGTACTGTTCACCGCCTCCGCCTGGAAGCTTTC
TTCCCCACATGCCGCCAACTAACTGAATGTGGCAGAAGCTGATGCATGGACGGACATGGA
TGGATCTTCTAAAAGAAAAAACTGACTAAAGTGACGTGCTCTAACGGTATATTATGCATT
TCTGCAATCCAACACTGACCGTTGTGAAGACTTAGATACTCTAAAAATTTACTCTAACTC
GAGATTCAGAATTACCGCTTGGTTAGGATCTTAGTTTCGATCATATAAACCTGGTATACT
ACGTACTTGCGGAATTGATGGTGGCACAGTAGAGTTACGTACGTACCTGGGAGCTGCAGC
TGGTGGCGCAGCGCGCGATCCGGGAGCAGATGGGCGCGGCGAGGGCGTCGAACTGGCGCT
GGTCCAGGGCGTCCACGATCTCCTCCAGCTCGTCGATGAGCAGCACCTCCTTCTGGCAGT
TGGTCACGGGCCACCGGCGGAGGATGCCCTCGACGACGGCGCCGGCCAGCTCCGGCTCCT
TGTGCACGAACTGCAGCACGCAGTAGACGAGCTGGCGGTGGTAGGCGTGGAGCCACCGCG
CGCGATGCAGCGGCAGCAGCACCCGCAGCAGGAACCCGCGGTGCTCCTCCTTGAGCGGCA
CCGCGAAGCCGTTGATGATGCTGCCGCAGATCTCCAGCAGCTCCGGCACGCCGCCGCCGC
ACTCGTGGACGGAGGCCAGGAGCGCGGCGGCCATGGAGCGCCGCATGAAGGCGCGCTCCG
GGGTCAGCTTGGCGTACAGCTGGTGGTAGGCGGTCTTGAGCCGGTCGCGCTCGCGGGGGT
CCTCGGAGCCGAACAGCGCCAGGAGCGACGTGAGGAAGGGGCGGTCGACGTGGTTGCGGA
GGGCCTTGGCGTCGGCCGCGGCGATGACGGCGAGGAGCACGTCGTAGACCGCCTGGAGGT
GCGGCCACGACGGGAGCAGCGACGCCGCGGGGGCCTCCTCGTCAGCCGCGTCGGCGAGTA
GCGACGGGCACGCAGCCGGCGGAGGCATCGTGCGGAACAGGTTGGCGGCGAGCATCTTGA
CCAGCGCGACCATGACGAGGTGGTCCAGCCCGGGCGGCTGGTTCTTGCCGCTGGAGCGCA
CCGCGGCGAGCACCTCCTCGAGCCGCTCCCGCTTGGCGTCACGCTCGTTTGCGTCGGCGT
CGTCCGCGAACGTGAAGACCCGGCAGCAGGAGGCGATCTTGTCGATGAGGCTCTCGGCCT
CGGGCTCCGGCGACGGCGGCGGCAGCTTGTTGGGCGCCGCGGCGGCGAACACGAAGACGC
CGTCGGGGTTGTCGAGCTGGAGCAGGTGGAGCAGCGTGGTGGACGTCCTCTTCCTGCCGG
GCGCCCTGGGCGCCACCCTGGCCACGACCTCCACCTCGGCGCCCATCGGCCAGCACCCGC
TCAGCAGCGACGACGACCCCACCTTCGCTCGCAGCGACGGCACCGCGCTATCAAGGGCGT
CACGAGGAGAGAGGAGAGAGAGAGAGACGGCGGCAAGGCGCGACTTAAAGAGGTTCGGCT
CAAGCGAAGCAAGCCGCCAAGCGGTGGCGATGGTTTCGCCGCTTGCTCGCTTGCTTGCTC
GCTCGGGAAACGCCGCGCGTTGGGGAGGACGTCCAGGGTGGTCGTTGGCGCCTAGCTGCT
GGATCGACCTCTTCCTGGCTCGTCACCTTTGCGTTGAGAATGGAAAAGAGGGAGGAGGGA
CGAGAGGCCCCGCGGGTACGCACGCACGCAGGCAGGCGCCATGGTCGTCGTCGCTTTATA
CGCGGGAGGCAGAACCGATGCGCCACCATTGGCGCCTAGCGTCATTCACACGTCCACGTC
CGGCCGGCACTGGCGAGGCCGTGATTCGCCCATGAATCCGCGGCGGTGGATTTAGCCGGA
TCGATGCTGCTGCTGCTGCTGCTATTGCTGGGCATGTGATGGTGTGGACGTGGTCCTCTT
GGTTCACAGGCGAGCAGAGGTGAGGGTGAGTGAGAGTGAGACTGAGACAGAGCATGCACG
GGCACGACGCAAACGGCAAATCCAATGTTGGCTGGTCGACCGCGTGCGGTGCGAAAATGG
CGGACCCCCGCCCGCTCACGGCACAGGCGAGTTGACACGAGCAGGCAATAGTGGTGCTTT
TGGTGGCCGTGTGCCGACCTGCTCGCCTGCTACTGTTCCTTTTCCGCCTGTAATTACTGT
TGCGCGCTTTCTACCTAAACTTCTAGACTTTGTACCTGTTGATGACACGTGCCACTGTTG
TATATACCAGATACTAGTAGAAGTTACTTTTACAAGATCAGGCAGCACCAAAAACTGATC
ATCAGCCAGCCACCAAAAGCTATCATCTAAAACTGATCATCAGCCCAGCCAATGGGACAT
GTCCCTATTCTAGCCAAGATCAGCACCAACCAAATCTCACATTCAACCTAATAACATCTC
TAGTTGATCCTTTAAAATCACTTAGCGGTGTAAAAAACACTTTTAAGGGTCTAAACACCA
CCTAGGCGAACCTTGTTGGCTTTAGAGAGGAGTAAAAAAATTAAGCGCCTCTTTCCCACC
TTCAAATATATTCCACTAACACCAATTCTTAGAACAACTTCAACAGAGGGACCCATTTCG
TCCGCCGCCGTCTCTTTGAGTCGGTGCAGATAAATAGTTGGTCCAACGCGCCGAGCCAAA
CGGACGCACGTCTGCTTTTTGTCCGCGTGCCGACCCATTTCCGGTCCAATTTTCCACCCG
ATTTGCGTCGGCGCGGACACGAAGCGGATGCGTGCGGCGCACGCCTACTTCCCTCCCTGG
CCCGCAAGTCGGCGACAAAGCGGCCACTTTTTTTCTCCATTTCCCCCAAACTCTCCCGCT
TGCTCCCGCGCCCGCCACCGTCATGGACGACGACTTCGAGGCCGTCACGTCCATCACCTT
ATTGGCCACGTCTGCCATCTCCGCCGAGGGCAGAGGCAAGGCCCGTGCCCTCCGCTAGGC
CGGGGCGTCGCCCAAGAAGAAGAAGGAGTTGACGTCCGAGGAGCGAGCCGTGGAGTCGGC
CAAGAGGAAGGGCAGGAGGCACGCGCAGGATGCAAGGGGCAAGGCAGCTGTCGCCGCCGC
CTTCGCCGCCACCGTCGCGCAGCAGGAAGAAACCAATGCCCGGTTAAAGGCGACAACGAT
GGAGGTCTTGTTGTACCTAGGGGTAAACCCTAACCAGCACGGGCTTGTCAACGCCGTTGT
TGCCGTGGCCGCGGCCAGCACGTGCCCG