Contig Data
morexGenes
Links



Map Locations of contig_63060 (7779 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_63060

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73147 3 1051 bp MLOC_73147.2 Available Available LOC_Os09g30360.1, FRAME:+2, EVALUE:4e-115, 13109.m03032 protein caffeoyl-CoA O-methyltransferase, putative, expressed
MLOC_73148 1 158 bp None Available Available None
MLOC_73149 1 2033 bp MLOC_73149.1 Available Available LOC_Os08g03990.1, FRAME:-1, EVALUE:1e-70, 13108.m00367 protein expressed protein





CDS Structure of MLOC_73147






CDS Structure of MLOC_73148






CDS Structure of MLOC_73149






Contig Sequence (7779 bp)

>contig_63060 7779 assembly3_WGSMorex_rbca.fasta
TTGAGGCTAAAATCTTTTAGTCAGTGGTACCCCTACTAAAATATGCATTAGTCCTCTCTC
TCCTCATTTAACTCCTCATGCAAGTTCTGGATTGGAGGGTTTGAAAGATAATAAATGCTC
ATTAACTTGATTTTAGTCTTTTTAATACTTAGATCCAAGCATGGATGGGCCTAGCAAGTT
TTAGTCTCATTATTTTTACTAAAACTTATCAAGCACCCTCTCAAAGGTTGGTTTGACTTA
TGTTTACTGACTGTGATAGGATCGCTTGTCTCCTGGCCCCGGGAATGCGTGCCCTTTTAA
AGAAACGGAGCGGGTGATGCCAAAACAGACGGATACGGCCTGATCTCCATGCGCACTGAT
AGCTGACAAGTCCACACTTCTCTGCACGACAAGCAGCCTATTTTCAGCGACACCGCCGGC
CGGCAGAACCACCCGCCGGAGAATGGCCGCCCCCGCCCCCGCCCCCGCCGCCGGAAGCAG
CCTCCACAGCAAGACCCTCCTCAAGAGCGACCAGCTCTACCAGGTAAAATCAAACCCTCC
CTCTTGATTCCACGCGCACGAAACTCCTTCGATCGATCCCCTCACAGCCGTCACATGACC
ACCAATTTCCCCCGACGTCTTCTCCGCCGCAGTACGTGCTGGAGTCCACCGTGTTCCCCC
GCGAGCCCGACTGCCTCCGGGAGCTGCGCGTCGCCACCGCCGCCCACCCCATGTAAGGAA
GGATCCCTGGGATTTTGCTACCGCCGCGAGCCCGACTGTTTTCCTTTCTTGTATGCCGTC
CGTGCTCGAACGGCGTTTGACGTTTTGCCCCTATGGACGCTACGTGCAGGGCTCGCATGG
CGGCGTCGCCCGACCAGGTGCAGCTGTTCGGCCTGCTGATCGAGATGCTCGGCGCCAGGA
ACGCCGTCGAGGTCGGCGTCTTCACCGGCTACTCGCTGCTCGCCACCGCCCTCGCGCTCC
CCGACGACGGCAAGGTTAGTTAGAATTCCGCCGTTCGCTGGCCAGCTTCCTGTCCAGATC
ATTATTTTGCGTGATCTTCCTCCGTGGTTGACGGCAGGTCGTGGCCATCGACGTCACGCG
CGAGAGCTACGACGAGATAGGGGCGCCGGTGGTGGAGAAGGCCGGGATGGCGCACAAGGT
CGACTTCCGCGTCGGGCTCGCGCTGCCGATGCTGGACCAGCTGGTCGCCGAGGTACGCGC
GTCCCTCCGCCTCCGTCCGTGCTCGCGCCCCTGTGTTGGTGTTGCATGCAGCTGCGAGAT
GACCGTGAGTTCGTTTATGACATGGCCATTCCCATGGCAGGATGGCAACCTGGGCAAGTT
CGACTTTGCGTTCGTGGACGCGGACAAGGCCAACTTCCACCACTACCACGAGCGGCTGCT
GCGGCTGGTCAGGGTCGGGGGCCTCATCGCCTACGACAACACGCTCTGGGGCGGCTCCGT
GGCCGCGCCGGACGACGAGGCGCTGTCGGAGCGCGACCGGGAGCTGGCGGGGATCGCCAG
GGGGTTCAACGCGGCGCTCACCGGCGACCGCCGCGTCCAGGTCTGCCAGCTCGCCATCTC
CGACGGGGTCATGCTGTGCCGCCGCGTCGCCTGACCCGTCGGCACGTACCTGCGGCGGAT
CGATCGATGCCGATGTTGATGCTCGGTTGGTGCCGGTCGGCACGATTGTTCTGGATCCCT
AATAATAAGTACCTTGGATCTTGCAAACTTGCAATAGACTGAACTGGTCTGAACAACAGT
ATTACTTGGTTGGTGACTTGATGTGACTGATATGCACAAATGTCGTGATTCCGTCTACCG
ATTTGCAGTCCGATTTGCAGTCCGCAACAGAAATCATGCACCAATGCGGAGTTTTTGAGG
AATCACGCACGGTACTACCGATTTGCAGTCCGCAACAGAAAAATATTCAGGCAGTTGGGC
CATGCTTTCTGGCCACCCTCCCTATTAATTAGCAAGAACAGTTCTAAAAAGAAAAGTACT
CCCTCCCGTCCGGAGTTGTGCTATAGAGCGACCTTAACGAAGCCATTAGGCTGCCGCTGC
CGGAACGGAACTTGAGAAGCTGCGCAATCACTCTGAAGTTCGATTGCATATATACTTATA
TAGCATCCTTAGTTCAGCAGGATATGTGTGTCTCATTAGGTTTGGTTTGCTGTTTAATAA
GCAAAATGTAGACTAGAGCTTGCACGCTGGCAACAACTGGAACGAGACTGGACTAGAGAG
CACAGAAAACTAAAGCGACCACATTGGGGGTCTTCTCTTTTTGCCAGGGCCGCATTGTGT
TTGAACTTTCATAAAACTATTCACCCATTCATGGCGGGCGGCGGCGGGGTCGGTGACAAA
GGTTCATGATCCACCGGAGTTGGGGTTGTTGGTAGTCCTCTGGCCGGACGAGGAAGACGA
GGGAACGGCCGGGCGAGTGACCGCGGTGCATGGTCCGCCGGAGCTGGGTGCGCCGGCAGT
CTTCTGGCCGGACGATGCAGACGATGGAGCGCCGGGGACGACGAGTCGGCGGCGACCGGC
GGGGGCGCTGCTCCGTCTGTACAACCACCAGAAGTTTGTTCATGTCGATAAAAGAGCAAG
GAAACAATCGAAACATGGCTAGCTGTTCCCGAAGAGACTTGGCAAGTAGTAGTAGTACCG
TGCATGCACGGGGCGCCATCTGCCGTGGGGACGCAGGATGGCGGCGCCGTGGCTGCTGAC
CGTGCTCCGACGGCGGCCGCCATGGCCATGGCCAGGAGGAGCATCGCAAAGATGATGCCA
CGTTCCATCTCTCTTGATCGGTCTCTCCTCTCCCTAACTAGCTGTATTGTATACCCGACC
AGTGGCCTAGCCAGCTTGCTGCCTTGCTCCCCTGGGTATCAATGGCTTCTTCGCGTTCGG
CATTGCGAATATATAGGACAGGGACGGCCTTACACGACAAGGACGAGCAGTAACAGAAAA
GCAGCCTGGCTCGCGTGAACAACCACCTTTTTTTCACACAAGGGCGAACGATTCGTTCGG
TTGCTACACGAGGGCAGCGTGTATTTGTTCCGAGAGCATAGGAGCATCTAGAATCATACT
ATGCAAATCCGCCCCCTTAAATATTCACGCAAATGTGCTCCTTTGCAACCACGCTATCAC
TTCTAAAACCTCGAATCTATGCGAAAACGTACACCTTGATCATTTGATAATACAAATACA
CATAACAATTAATACAACACAAAATAAAATTATTCATACATAAAAATACATACTTCAAAC
ATTAAATTTATTATGAGTGTATAATTCAAATATAAAATTCATTGTTTTTTTAGTGTGAAC
CCACATATGCTTCACATGATTATTGAATAGTTGAACGGTACACCCGTTGATCTTAAAATT
GTCTATGCATTTCTAGAAAGTTCACAACATGCATTACATATTGCTCCGGGAGACAGACCT
ATACTCTCGATTCTTAAATTAAATCATGTACTCCATCCGTTCCTAAATATAGGTCTTTTT
AGGGATTTTATTAGGAGACTACATACGATGCAAAATGAGTGAACTTACACTCTAAATTAT
NTCTATATACATCCGTATGTAGTATCTTAATAAAACCTATACAAAGACTTATATTTAGGA
ACGAAGGGAGTATGTGGGTTGTCCCTTGATTACACATGCCATTAGCTATCATATTGTCTC
TGGTTCCCAGACCAGATCATTGGAGGATCACAAACAACACTCCAACAAGTTTGGAGCACT
CCGAATGCCCTTTTCATATCCTTTTCAGTACCTTCTTGTGTTTGTGGAAAGAGAAATTGT
TTTCTTTCCCGGGACACGAATATAGTCTTCACAAATACCACTCACTAGGATATATACCAT
TGGCAAGGTAGTGCCTCATTTTATAGTTGTACCCGTCGACAATGTAATTGCACATTGGAG
CATGCTCATCACAAAGTTTCCTGAACAACAGAGCTCGCACGGCTAGCGAACAATCCGCGA
CAGGCTGATTAAGTCCATGTGTGTAAGTGCAGGCAACCATCTCTGGTGCTGCATTGGCGA
CAGCGGGTTTAGGAGGAAGAATACGACGACGCGGCGAGGCGTGTGTGGTTTGCGCCTGGC
CACAGCGGCCGGCAGGTGGCCCTGGTTGGCTGCCTTGACTCGGTCTTCGTTTTCTTTGAC
GGGTGACTAATGTCGAGCATGCTTCTTATATGTAGAAGGGGCGGGGACACAAATTCTAAA
CAAGTTACTAGGGACCAATCAGAAGTGAGGCTCATACCGAGGGTAAGTAAAAGCTCTGGG
CATACTCATCCCTCTTTTCATGATATATTTTGCCCTCGGCTTGATCAGGATGGCAGTCCA
GGCAACGTTCACTTGCAGCTCCCAGGCGCCGTGACTGCAGACTTTCTCTTCGGCAGGATA
AGCTATGCTGACCAAGGTGCCTGCATCCTCGTCATCGACATCATCATCATCATCAAGGAA
GCGAACATGGACAACAATTTCATCTTCGTCATCATCCGGGTCAGGGACAGCCACCAAGTT
ACGACTCAACGCAACAGAGGAGCAGCCGCTCTTCATACCTCTACTATCGTACACAATCAT
CTGAGTCTCAGGATTTTCACTAGTCCCAGCACATATTTTGCCAATGAAAGGTGGTGCTCC
TTTCAAAATCTCGACTTCAAGGCTAGCTGCCACTGGACCTTCAACAGGTGCAAGCACCAA
CTCCACTCTGCTCAGCCAACTACTAAGCACATCTGTGATTGGTTTAGGATTAGGGCGGTA
GACATGGAGCTCTATTACACCTTTGCTAAAATCTTCGTCGCTGGCATCACCCTTCACCCT
CAGATTGAACTCAAAGTAAATATAAGCCGGCGGAACTAATGCTCGCCTTGGTCCTGTCAA
TGTCAGCATATCATCCTGCACAGTAATTTAAGAAATGTCAAAATATGTCTCTACGTAGTA
AGTAGAGCAAACTGTGTAGCTGGACATGCTCACCAAACCAAACTGACTAGTCACATAAAC
TCAAACCAATTTTCAAAATTATCTTGTATAACTAGCCTGGGAAGCACCCATCGCCTCTGA
TATAAAATTATAAATTCCTACCAATAGCCATGCATTTGTGGCTTGCATGTTAAACAGAAG
GTAACACTTATTTTATTTGTGGAACAAACATGTCAGCATTCAAAAGGCACTTTTTACAAC
CAGACATGTCAAGCAAGTAGTCAGACAACAGTGCACAAAATAAGCAACTAAACCTCATAC
GAAGTTAAAAGGCAACAGGTTTTGAACAAGTGACCAGAACTAAACGTAGAAACCTCATAG
ATAACAATCACAATAGTGGTGTATTACAATAACAATCAAATTGCTAGGGAACTGCATTTA
CAAATAATAGAGAAAAGTATGCTATGATAGCTACATCGTGAACAAACAGTAAGCTCAGAT
ACCTACAACGTGAACCGGCAGTAAGCTGCAACAGCTATCAATGTTGTCAGTCAAAATGGT
AACTCACAAACTATTTTGACTGAAATTTGTGTATCTGGTATGATGCTAAGCTTCTGAATA
CTGGTAATTGCAACCAAGAATGACAAAGAGACATTTTTCAGTAAACATGAGCACGTAATG
CTTGCAGAGCAGGACCTGTTCTTATAGGGAAACAAGTACATAGCAGAAAATACGAAGAGT
ACATGGCATAAACCTAGCAAAATTTAGCAGACAATTGAAGAATGGAGCTGTTTGTGTTGA
GTCTAAACAGTTCGGCTATGGCACCAGCGATTATATAATACTCCCTCCCTCTGTACCATA
ATATAAGACGTTTTTGCAGTTCTGCAAAAACGCTTTATATTGTGGTACGGAGGTAGTAAT
AATATTATGGTGAAATTCAGCATACACAGCTTGTATACACAATAGATTTAGACTTATTAT
CAAGAGGATACAATTATTAGGATTTGATTAGTATATACAAGTAAAAGCTAACGAAGCAAG
GGATGAACTAGTGCATACCTTGGAGCTGATCATCTGGGGGTCTTCCCTTCCACGTCTAAA
CAGATAGACACATCGGTAGTCAATCCTATCCCTTGCAAGAACAGTGCCATATACACTGAT
TGGATAACCCCGGTCGGATTCGATTACTTTGACGGAAATGACGTTAACGGCTGACGACGC
AAAGTACCTCCCCAACTCAGGAGTTATATTGCTATCGAGCGGCGGCCCAAGGCCAAACTT
AGCTGTAAATCAAGGGCAGGAGACACAAGTCAGGACCAGCAACACAAGATGCCTAGTTTA
TTGTTCACATAGATACACCAAGGGAAGGACCGAAGGGAAATCCACACTCATCAGTCTCTG
TATGTTTAATCAATCGATCAATACCAAGACTGCTGATGAAACAATTGCAGGCATACTCAC
ACTCTTTATCGAGGTCGAAGCCGGCTATATTGAAGCTGCAGAAGCGGGTAGGGACCAAGA
GTTTCTTCTTAGGATCCATTTCGGTGATCCTTTCGACGCAGGCAATGTGGAGCTCCTCGA
GCTCCGCCCTTGCCTTGAGCATAACCTCACCGTCATCATCGCTGTCCCACATTGGAATCT
CGATCACTTCCTCCTCCTCCTCCTCCACATTTGAGACGATCGAGCTTCCAATTTCCGTAG
GGGGTTGCTCACCCATCGTCTTGCAGGCTGGAACGGCCATACCCTCGTCTTCCTGCTTCT
CCTCGTCGCGGGTTGTTGGGCTAGCTGCGATCTCCATAGCCATAGAGGCTTGCTCCTTGG
GGGTACCATCGCTGGCTGTACAACAACCAAGAAATCCATGGTGAACAGAAGAAGGTGAAT
AGAAAAGAGAAAGGGGGTGGAGGAAGGAGACGGGAACCTTCTTCGTAGCTGGCGGCGTCG
GTGTCGTTCCAGGGCCGCTTCCGACCGATGAGCGCCGTCACCGGCAGCTGGGTCTCGCCT
AACATCTTGTCACCCAGGAGGAAAGAAGAAGATGGCGTGAGATGATCAACGGCGATCGAC
GTCGCCGGCGGCAGGAGCTAAGCTAGGGTTTCGGAGGGGGGGCGATTGGATTGGGGAATC
GAATCAATAAGTCGGGACATGAGTGCCGTCATGAGCCGGAAATGTGTTGCCGGCCCAGGC
CCTCCCAAAACTCGGCCCAGGAAAAAAGACTAGAAAAAACGGATAATGAAGAATGCGTCT
TCGCACCCGTGCCTCCCTTTCTTGAAGATATACAGTAGATAACAAAGGGAATCAATGGGA
CTCGGCCATCAATTTGCTCTTTGTACTTAGCTAGCTTAGCTTCTGAAATAACTTTTTGGT
TAGGACTGAGAGGAGCTTTATACACTATGATGTAAGATAGTCATAGGAAATGATATGAAA
GCGTCTGAAATTTCTAGGAGAAATGGGATTATTCAGCACATTTGTCAACATAATTCATAG
ACAGTGATAGTACTGAATAAAGTAGGAAGATTTGAGGGGGATCGACGACCGGTCTGATGG
GTGACACGGGTACGCTGCGGGCGACGCCCGAGCGAGCCAAAGCCGCCATTAATGGCCACC
TACCCCCGCACCTACCCACGCGCCAGAGTTACTCAGCCCACCACATCGAGTGCGAGATGG
GTTTGCAGTCTCCACCGCTCCCCACACATCCCAATCTCTCCTCTCGGCGCGCAGATGACG
AACCCGCGATGGAGGAGATGAATTCGCCGACTGCGACCACAGGCGCAGGTGGCGGCGTCG
GTGGCGATCCGGGAAGTGATGCCGGTGCCGGTGGAGATGCGCCCGCAGATCGACTCGCGC
TCGCCGGAGGCGGGGGAGGAGATTCTGCGGGGGGTGAGG