Contig Data
morexGenes
Links



Map Locations of contig_63039 (5618 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_63039

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73132 2 1905 bp MLOC_73132.2 Available Available LOC_Os01g64630.4, FRAME:-2, EVALUE:0.0, 13101.m15102 protein actin, putative, expressed





CDS Structure of MLOC_73132






Contig Sequence (5618 bp)

>contig_63039 5618 assembly3_WGSMorex_rbca.fasta
AGCCACACGACGAAAACAGAATAGAAGNNNNNNCTTCTGGAACGTCGTCATCGGGCTGTC
ACGCGGATACACGACAAAATCAATAACTTACATATTGCTTGTTCATGGCGACGGATACAC
GACAAAACCACGCGATCTCAAGAACTTACACGCTGGCAAAAAAAGCAAACAACGGCGATC
CGAGGAAATGGTGACCTTCGACATTAGTGATTACACTGAACACATCGTTCACCCATGTAA
ACATGCCTTGGTGTTGGATCCAATCATAGGAGCATGATGCCTCCCACGCGTCCTGATGGA
CGGGGGCAGTGGCCTCATCATTATCTTCACCGACACCCTGAAGAAGATGGGGTTTCCATG
CATGGCTTGTAGAGATTGGACTAGGCTACGACGGAGTCATACTGAGCCATCGAGTTCTTC
CTTTGGGATGGATTGACATCGAGGTCGTCTTCGGGGACGAGACAATTTCTGGACTGAAAC
AATCCAATTCAAGGTTGCTACTCTCCAAAGTGGTTGCCACACAAACTTTGGTAGACTCGC
ATACGTAAAGTTCATGGCGGTACCATCGTACACCTACCTACATATGAAGGTGCTAGGTCC
AAGCGGCACGATCACTGTCCGATGGAGCCCGAAAAAAGGTTGTTCCCTTCATGATATGTG
AGTAGTCCATCGCAGACCTATCTGTCCATAGTTAGTACCTAAATGGCTTCTTCTCTCTTT
TTGATCTTCAATACAAAGTTCATTGCGATTCACGCAATGATCTATCCGATATAATCCTTT
TTTGTGGTGTGTTTGTTGTGATCCGATGAATTGCGGGTTTATGATCAGATTATTCATGAA
TATATATTTAGTATTCTATGAATTCTTTTATGCATGATTGTTATAGCTTCGTATTTCTCT
TTGATCTATCCATTTGGTTTGGCCAACGAGATTGATTTATATTCACTGGGAGTGGTGCGT
TGTGATGGGTCCAATCTTCTGGTGCTTAATCCCAGTGAAAGAAAGGGACATGATCGACAA
TTGTCATAAACACTAAATGACACAAATAGTTATAAAAGATAATATACCACATCCGAATCA
TTGACCGTATGAGAGCTGACGGGGCGAATATAAAAAAACATGGCACTATATAATAACAAA
CAATAATACATGTAAGAAAATTATACAAGTAACTATATCTAAATCATACAAGTAAGATTT
TTTTAAAGAGATAAGAACAAAAGGCTCACCACGATGGTGCGAGTGACGAGATCGGCGCGA
GCGATCGACGACGATGACAACGGGGACGAGAGGTTGGAGGAATAACACAGGAGAAGAAAG
AGGAGAAAGCTTAAGTGTGGCTCGGGCACCTCATATCAATGGCATCATGCTCTCACTCAT
TTCATCGAACACCTCCTGTGCATAGGAAAGGAAAACAAACTAGCACACACCTCCCACCTT
CTCTGAGGAAAAACAGAGGAGAGGGGGGGGGATAGGGACGAGGGGATATATATAGGCAAC
CTTTTAGTCCCGGTAGGTGTCCAAAACCGGTACTGAAGATAGGTCTTTAGTCCCGGTTGG
AGACCGCTTCTGCCGCAACCCCTTTAGTCCGGCTGGTGTCTCCAATCGGGATTAAATGTC
CCATTTGAACCGGGACTGATGCCCGCCGAGCCCCGTTCGACATCCCCATCGCTCGAACTG
GGACTAGTGCTCTCATTAGTCCCGGTTCGTAATGTGACCAAGACTATTGCTCCGATCCGA
TTAAAACCAAGGCCCTCTTTTCTACTAGTGCCTTCATGCATTATTCTCTACAATGACCAT
GACTTTCCTTCTCTGTTTTATACTAGCTTGGGCTGTAGCTTACCTGACTTTTCTTCTTGA
TGTTAGAGGATCCGGTTCCGTGGGGAAGGAGCATAGGCGACTCGTACAACATAACCATAT
ACGGAAGTACTCCTAGTACAAGAGTTTTTGATCGCCACCGTCTCAGGAGGTTCGCTGGAG
GTCGCGGTTGGTGGATATTCCGGTGTAGGGGTGGTTTGTGCTGGGATATCGTATGACCTC
CATAGATTTCTCGACATGGTTCTGGCGCCGTGGTTGGTGTAGGGGTATCATATGACCTCG
ATTCTGCATAAATTTCTTGACAACCAGAATTTGGTGGGGATATGATCAAACCGACCAAAA
CAATATTTTCTGTTTGATTGCGTTGGGCATGTTGTTTGTGTGCATGATGCTATGCAGAGG
TCACGCATTCTTCCAATTTGGTTGTATCAGCTCGATATATGAATTGAATGAATTGTCATG
TATATAAAAAGAGTACGTACTCCATATACAAAAGACAAGACATAACAAACATAAAATCCC
CTCAATAATTTAAATGTACAAATGCTTAAGTACCAACAAAATAAGCTTTCAGGTAGTTTG
ACAAGAACCCCCGCTACAAAAGGTACAAGAATCAACACCCACGCCGGGGTGGTGCAAACA
AACACACACTCTGTTTCAGGTTTCCAGCACACGCACGAGCTGAATCACCGAACCCGACAG
AAATGCCCCAGACTGCATGCTGAACAACCCACCTTCAGTGAACCCACTGAAACTGACCCG
ACGCCCTACAGAATCGTTCGAAACCATCAATCAGACCTTACCTTTCAAATTTGTTCCATG
ACCAAAACACTTTCAGCCAACCACGACGCAGTGGAAACCATGACACGTTCAAGCATCTGC
GATTTGGACCTCAAGCAACTGAATGACAGGTACAGGTTGGCAAGCCATGGACTGATCAGA
AGCACTTCATGTGGACGATCGACGGGCCAGCTTCGTCGTACTCTGCCTTGGAGATCCACA
TCTGTGACAAAGATACGGGGACGCCATTAGTCTCGCGGGGAGAAATGAGCAGTAGCAAAA
CATTATGTATGCGACAGAAAAATGGCTACCTGCTGGAAGGTACTGAGGGAGGCGAGAATG
GAGCCGCCGATCCACACACTGTACTTCCTCTCCGGCGGAGCGACCACCTTCACCCTCATG
CTGCTGGGCGCGAGCGCGGTGATCTCCTTGTTCATACGGTCGGCGATCCCAGGGAACATG
GTGGAACCCCCGCTGAGCACGACATTCCCGTACAGATCCTTCCTGATATCGACATCGCAC
TTCATGATGGAGTTGTACGTGGCCTCGTGGATGCCTGCGGCCTCCATGCCGATCATGGAC
GGCTGGAAGAGCACCTCGGGGCACCTGAACCGCTCCGCCCCGATGGTGATCACCTGGCCG
TCCGGCAGCTCGTAGTTCTTCTCGACGGCGGAGCTGGTCCTGGCGGTCTCCAGCTCCTGC
TCGTAGTCGAGGGCGACGTAGGCGAGCTTCTCCTTGATGTCTCTGACGATTTCCCGCTCG
GCGGTGGTGGTGAAGGAGTAGCCCCTCTCCGTCATGATCTTCATGAGGCCGTCGGTGAGG
TCGCGCCCGGCGAGGTCCAGCCGGATGATGGCGTGGGGGAGCGTGAAGCCCTCGTAGATG
GGGACGGTGTGGCTGACGCCGTCGCCCGAGTCCATGACGATGCCGGTGGTCCGGCCGCTG
GCGTAGAGGGACAGCACGGCCTGGATGGCCACGTACATGGCGGGGCAGTTGAAGGTCTCG
AACATGATCTGGGTCATCTTCTCCCGGTTGGCCTTGGGGTTCATGGGCGCCTCCGTGAGC
AGCACGGGGTGCTCCTCCGGCGCCACCCGGAGCTCGTTGTAGAAGGTGTGGTGCCAGATC
TTCTCCATGTCGTCCCAGTTGCCCACCACGCCGTGCTCGATCGGGTACTTGAGCGTCAGG
ATGCCTCGCTTCGACTGCGCCTCGTCGCCCACGTACGCGTCCTTCTGCCCCATGCCCACC
ATCACCCCCGTGTGCCGCGGCCTCCCCACGATGCTGGGGAACACGGCCCTCGGCGCGTCG
TCGCCGGCGAATCCAGCCTGCGGTTTGGCACGAAAGGATTTATCATCAGTTCGCGCGCTG
AAATGTACTCCTACTCTGCACTTCAACATGCTATCTGAATTTTGGATGGATTAACACCAT
GACAGGATAACTGAATTTAGGAGGATTGGCATCAGCTGACCTTGACCATTCCGGTGCCAT
TGTCACACACAATCGGCTGGACATCCTCTTCGGCCATTTCTCAAGCGCTTTTCTGCGAAA
GAAGGATTTTATTTTTCAGCCTGTTTGTTCAATCAAATCCGATAAAGGGTGATCAACTGC
GTAACTGCTTCTGGGGCATGGTCTTGAGCATCACAAGGATTTGCTCGTATACAGATGGAT
CCAAGAGAAACGGGTGATAACAAACGGATAATTTGCCAGTCATCACGCAAGATTTCTCCA
GGTATTGTATGGTATGATTAGCGGGTGATTTTTTTTTTATATAAACATCAGCAGATTTGT
TTCTTCATTATCGCCAATCACGGTAAAAGCAGCACACACATATCATGAGATTGCTCCAAT
CTTTCTGAAATCACGTCTTTAATTCGGAAGACACGATTGACTGGTCATCCCGAACCGGAA
GCGGTCAACAGAAGAAGAAAAAACACTGCGGCCCGTGGTCAGCGCTCGCTCACCAGGGAA
CTCGTGCAGTATCATCGACTTGACCAGCAACGGACGCTGCGCAAACAAGCAGATATGATC
CTACGCCGGAACCAACGGCACCATACCAATCCTATGATCAAATACCATCGACAACAGAAC
AGCAAGCAGCACAAACTTGGCAAGGATCGCTGGAACCGCCGGAAAAACTAAGGGCCGACA
CATGGCGCGGCGATCTATCTATCAGAAGGAATCCATCGGGGCGACGGACCAAATCGATTC
AGGAAGGGGGTGGAGAGGAAAGCATACCTCGGGGTTGGCGCGTTGACGGAATTTGGGGGT
GGTTCGTGGGAGCGCGGAGTGACGCGAGCGGCGTGAGAGCGAGGCGGGGACAAATGGGAG
AGGAGACGAAGCAACACGAAAGGTGGAGTGGAGGGGAGCAGTTTTATATGCCAGCCTGCT
CCGGTTGGGCTGGCTCTGGGTGAAGGTAGGGTAGGGTAGCTCGCGTGCCTGCTGCGTTCT
TGGCCGCGCTTGACGCCACCATCCATGTCACGGCGCGAGCATTGAAGTGGAACGACGACC
AGGACAACACCGTGCTCATGGCCGACCTGGTCCGTCCGGCGCGCACGGTCAAGCAGTGCA
GTGGGAAACGTAGTGTGCGTCCGACGGTGTCGGACTGCAGAGCGGAACTTTCGGTGCCTG
ATCCGGCGCGTCCACGTCCGGACGTCGTGGCTGGTGGGGACACACCGGCGGCGGACGTGG
CCTCTGGACTTTCGTGCGGGGGAGGCCAACCTTTTCTTTCTTTTGTATAACAAAACAAAG
CAAAGTATAAGGACACCTCCAACGACGGCAAACACATTCGTTCGTAGACAAATGATTAGT
TCGTGGACATAGATATGTGAGCCGGTCATTCAAAGTACCGTTGGAGGAACATGGATAAGG
ATGTTGCTCTTGCGGTGGCGCGTGGTCCTTCTCGTGGTCAGAGCAAGTACAATAAGATAT
AGTCAGCAGGTTGTAAGGATTAAAATACTACTTTATTCGTTTTAAAATATAAGACTTTTT
AGGGATTTCACTAGGAGACTACATACAGAACAAAATGA