Contig Data
morexGenes
Links



Map Locations of contig_62966 (5234 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_62966

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73105 1 1171 bp MLOC_73105.1 Available Available LOC_Os08g41340.1, FRAME:-1, EVALUE:5e-138, 13108.m04436 protein ras-related protein, putative, expressed





CDS Structure of MLOC_73105






Contig Sequence (5234 bp)

>contig_62966 5234 assembly3_WGSMorex_rbca.fasta
TGAGTAGCTTTGGCGAGTCTAAGACAATTCCATATATTTCATCTTTTTAGTACATGTACT
TATAACGATATCCATTCTTGTGAAATGACGAGATGCGATTCTATCCCTGACNNNNNNNNN
NNNNNNNNNNNNNNNNNNGATCGCATCTTGGGCGTTACACAAGGCCAACATCAAGCCATA
TGTAAGAAGCCCACCATCATTCTTGAAGAAGTTGCATCACAAGACCTCTAGATTTGGCAT
CCTTTCTTTGTGATGCCTTGGTCACACAATGACTTCAACGTGCTGCAGTTGTCTCCATTG
TTTGAAGTTTGTGTATGGCAGAAGCTCCTTCGTGCAACTATACCATCATCGGTCATGACA
ACAACATGGGCTATTATCTTTGATATCTATCCTCCATAGGTGGCATTCGTCAAGATCATT
TCTAAGCTGACAACAAATCTCACTTTGTCCAAAGACAAGGAGTTAGAAAGAATGTCGAGA
GAGCATTTGGATTGCTTCAATCCCGTTTTGCGGTTATTCAAGGACCTACAAAACTACGGG
ATGGAGTGATATTGTGGGGCATGATGACAACTTGTGTAATCATGAATAGGATTGTGTAGG
ATGAGGGTGACCGAGTTTGCCATAGCCTCTCGAGGACCTACAAAACTATGGGATGGAGAG
ATATTGTGGGACATGATGCCATCTTACGTAATAAGGAACATGATTTTGTAGGATGAGGGC
GACCGATTTTGCCACAACGTGGAATTTGAGGAGATGGATGATCCTTTCGAACTTCGAGAG
GAGAATCCAACGATCCAAATGCATCAGCATATTCGCCATCAAGAAACTCATGAGCGGCTT
CAGAATGATCCGGTTGGATGTTTGTGCACGCTTCAAGGGAAGACTAAAAATGTGTCTGAG
TAAGCTAAATTCAGGTTTAAAATATTTTACTGTAAAACTTCATGTTTGAATTGTAATATT
TATATTTATATTACTATTGCAATAAAAATATTAGGAGTGCCTAAAACCCATCTAGATGAG
ATATAATCTGGCCTCATTCACGTGGAAAATTAAAACAATAGCATCAGAATGATCCGGTTG
GATGTTTGTGCACGCTTCAAGGGAAGACTAAAAAATGTGTCCGGGTAAGCTAAATTCAGG
TTTAAACTATTTTACTGTAAAACTTCATGTTTGAATTGTAATATTTATATTTATATTATT
ATTGCAATAGAAATATTAGAAGTGCCTAAAACCCATCTAGATGAGATATAATCTGGCCTC
ATTCACATGGAAAATAAAAACAGACACAAACACAACAGCACACACGCATCTTAAAGTGTC
ATACCCAATGGCTATAAAAGATGAATGAGACAACTAAAACTCAGCTAGATGAGTTCTAGC
AAAACCAGAAAATATTTGTACAACATGATTATGAATGAATGATGATATTTATCTTTAAAT
ATTCTGAGTGCCGAAAAGAAAAAGAAAAACAGGGGCAATCATTTTGTGAATTGGGTTGGA
TGGCCAAAAACAGAGGCAGACATCTTGGCGCACCGGATTGGAGTTGCCCTGACCTCCCAT
AAAATTTGATAAAATGTGACAACTCTGAACCGCATGGCCTTTCGGTGAAAGGCGAGAAAC
AGTCCGTCTCCACTCTTGCATTAACACAACTATCCTCCTCTGTAACTCAGATGTGTAACA
GAACTAGAATCCAATTTTGGGTTACATGTTTACAAACAATACCGATGACCAAAAAAAATC
ATCACATCCCAGTAAAGCCCAATAGTCAACAATGTACCAAGATTGGCTAGCAGCACCCAA
ACCGGCTAGTTTGCTTCTGCCCGTCTTTTGAGTCGCTGTCATCGATACTCACCCTGTTCA
GGGATAGCTCGGCCTTGTAAGAGTCGGAGTTCAGGATCTTCCTGCTCACGCTGTTGTAGA
TCTCCTTGATGACGAGCTCGAATGCTGTGTTGACGTTCGTCGAGTCCAGGGCTGAGGTCT
CCATGAAGAAGAGTCCCTCAGATTCGGCAAGTGCTTTGCCTTCCTCCACTGGCACTTCAC
GGATGTTGTCCAGATCGCATTTGTTGCCCACCAACATCTTGGCTACCGTAGTGTCAGAAT
GTGCTGCATTGGATTTGAGAATAAATTTTGTTACTTCAGCAGAAATGCAGGCAATATGTT
GAAAGGAGAATTGTTCTAATAGCTAATATCAAGGAAAACGCAGCTGTAAAAAACCACAGG
TGCAAGGAATGACTTGTCATGATTGCACAAGGGACATATAACAAATCAAGCAGTGATAGC
CATCAAGCAAGAAAACAGAACCATGGAAAGTAGAAAATGTGCCCAGGGGACAAAAAGCAA
AAGGTAACATGACAGATCATTCCCGGGAATAAAATTTGTTGCTTTTAAGTTAGAAAATGA
AGCCAAATGATCAAGTATATCACTAGAAGTTGGATGGTGCAAGAAACCAGAACCAAGAAA
ATCATAACATCCATCCACACATAAATACAGTGTCAGCAATCTGCATAAGCGCAATGTTAT
CCATCCAAAAGTGCCTATCACGTATGATACCTTCGGATACATCCATACCAATGCAATCTA
ATAATTTTCACCATCTAAAAGCCACAATGGAATTACACACTTCTTGGGATCAAGCATAAG
CAAAGCTCATATCCTTTTCAGTTCAGTCTGTAAAATACATGCTGAGACATACAGTACAAG
TGACAAAATGTAAAATTTCCGACCATCATGTTATGTTAGCATCTTCCAATGACACTGTGG
TGCTTGTTTAGTCTGTTTCAAAACTTTGTATGCTAAATAACAATATACTAGGTAGCTCGG
ATAATTTAGGATGCATCGTCCTGTCTCCTGAGTTTCATGGCATGCCAATTGACAGTAAAA
CACAAATTGCAACTAGAGTCAATGATACATTTGTTCAGCCAAACACAATTGTGTTATGAC
TTATGAGCATAGCTTTCTCTTACACCAAGCTTTGCCCTTCTGGTAGAGTGACACATCCTA
GATAAAGTCACTATGTACATAAAAGGAATGAACCAAGACAATGCATGTTTCTATGCTGGT
TGACTGTTTCCAAAAGCAACAAATGAAATAATTGCCTAAGAAGGGAAATGGAGAATAAAT
GGTGGCCGGCATCCATAAAAAAGGTTTGCCCTCAAACATTAATAACAAACTTAAAGCGGG
ACTGGAATGATAAAGGTTTCTAACAAGAGAATGGCATCCATGCTGTTGCAAACTTGCAAC
AACCATATCGATAAAGCGTAAGCACAGCAATTAGAGGATGTCGATCAGGAAAATTCTGGA
GTTTCTACACACAACAACAGACAACAAGACAACGGCAACTATGTTTAGGAACTTTTTAAC
ACTGAAGAACTCAAGCTAAGCAGCCTCCAATATCAGAAATTCAAAACTGCAAATAGTTCC
CCACAAATTAGCAGTCCTGACTTCTCACAAAAAAAATCCCGAGGATAACTTCTACTTGTT
ACCACAAATAAGAAGAAAGGATTGTCATCTACTCCCTTCGTTCCTAAATAATAGTCTTTT
TAGAGATTTCACTAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTCTATATACATCCGCATGTAGTCTTCTAGTGAAACCTCTAANNAGACTTATATTTAGG
AACGGACGGAGTACTTCAATGCCGAATCCAAAACAAGTAACTAGCACAGCAATTACAGTC
ACCCGGCGTGGTCCTTACATCCAGTCCTCAAACATTCCACAACAAGCCTTTACATGAGGA
CTCAGATCCAGATTCAGGACAGGTGGCCCAACCCATCCGGTGTGACAATTCTACTGCTAT
GTAGAAGTATCAGAGAACACTTAACCCAATCAATCACCATCTATGCTCGAGCAGTTGTGT
CCCTTTCGACGCCGACCAGGACCAACTAGATCTACACGATCTTACCGAATCTACTTTTCT
ATGGGAGTTTAAATAAGGAATCAATTGATCCAAGCTCACAGACAGTACTACAAGCCGTAA
GCAAGCAAATGGAGGCTAATTAATTAAGCAAGGAAGCAGGGGATGCGGGCGGAAAGGGTG
CGTACTGTTGAGCTCCTGGAGCCATCGTCCGACGTTGTCGAAGGTGCCCCGGCGGGAGAT
GTCGTAGACGAGGAGCGCGCCGAAGGCCCCGCGGTAGTATGCGGAGGTGACGGCGCGGAA
GCGCTCCTGGCCGGCGGTGTCCCAGATCTGGGCCTTGACCTCCTTGCCGTCGATGTCCAT
GCTCTGCGTCTGGAACTCGACCCCGATGGTGGCCTTGGAGTGGAGGTTGAACTCGTTGCG
CGCGTAGCGGGAGAGCAGGTTGCTCTTGCCCACCGCGCTGTCACCGATGATCACCACCTT
GAACAGGTACTCCTCCGCCTCCCCGTCCGAGTCGTCCCCCATCCCCATCGTTCGTTCCGT
CAACTAGCTCGTGACCCCTCGAGCTCGGAGGCACCGCCTTTCCGCTTCCGTCGTCCCGGG
CACGCTCGAGCGCTCTGGTGGGAGGAATGTGCGAGATTTGTAGTGGCGTTTTGGGGGGAG
GCTGGCAGCGGCGCGGTGGGTTTTGACCGAACGCGCACGCCGAGGCCGAGGTGAGGCTGC
TTTGCTGGGGTGGGGTGGGGTGGTGAGGGAAGCGCCGAAACCAGAGAGTTACGAGACGAG
TGGGTGGCGAGTGGGACGCACGCACCGGCACGGCACGGGCTCGGCGGTGGACCGGAGAAT
TGGCGGCGGGTCCACGGTGTCGGTGGGACGGGTGGACGCGTCGTGCGTTACTGCGGTGCG
GGCACGCCTGAGGTGAGTTGGCGCCCCGTTGTTCGCTGGGCGACACAACTTGGAGGCCCA
CGGCCATCGCAACAGGAGCGGTACCGGTGCGTAGTGCCGACCATGTCCCGTGTCACTTGG
TTTTGGGATGCAATTCAGGTGCACGATTCTAGTCAACGATTGGTCATGCACGTCGGAAAG
GGAAAGTGCCATACGCGGGAATTCAAGGATTCTTCCGAGTTCCGATTAGTATTATTTTCT
CGATGGCTCCATGATATGATTAGTTTAAATATCAACAATGTTATCTGTCGAACGTTAGTG
TCAGCGACCCAGTCAGTGAGGAAGGCAGGCCCGCAAGCCAGCCCGGCTCACGGGTAAGAG
CAAGTACAATAAGGTATAGTCAGCAGGCTGTAAGGATTAAAATACTATATTTTTGCTGAG
TTGGATGAGAGAGA