Map Locations of contig_6294 (4615 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_6294

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73094 2 1599 bp AK373882 Available Available None





CDS Structure of MLOC_73094






Contig Sequence (4615 bp)

>contig_6294 4615 assembly3_WGSMorex_rbca.fasta
TGGCAGCACTAGAAAACCTAGACAGAGCGGCTACGCTACTATGTACCCAGGAGCCCCCGA
ACCGCGGCGAGGGGCCCCAGGCGCCGGCCGCGTCTTCGCTCTTCCTCGACATCCGCGACC
GCCTGAAGTCGTCCCCGGCGTCGCCCCCACCGCGCCGGATCCCGGCCAACCCGCTCCGCC
CCGGCGCGCCGCCCGCGGCCCCTCCCCTCGGCCTCGACGACATCAAGCGCACCCTCGAGT
CCTATCGCGCCGTCTCCCCCCGCTTATCCGGCCCCGGCGTGGGCGGCAGAGGCGCCAACC
CGTCGTTCCAGGATTTGCTCAAGAGCAGCGGCGCCAACCAGGCGGGTCGCCCCCAGGGAG
GAGCCCCCAACGCCGGCGACGGCAAACCGTTCAGCCTCAGCTTCGCCAACATCCGCGAGA
GCATCCGCAAGCTCGACCCGCAGCATGACAGGCAGCGCCAGCCGCCTTTGCGGTTCCTCA
ACAACACGCCGGAGAACATCTTCGGGAAGGAGTTGCGCCAGAGGGCCGGGAAGCCGCATC
CCGGGGAGGCGAAGGATGACGAGGACGACGGCGTTTTGCTCACCAATCAATACACCCCCG
AAGATCTTGGCAAGATGCTCAGGGACCTCCGGCCGGCTGACGCAGGGAAGGACGGGAAGG
AGTGGTTCTCTCTCGAGGAGCTGCAGGGTCGGATCGCCAAGATCGTGGAGCAGGAGAAGA
GCAACCCGGACTCGCGGTTGGGCGGCACCTTTGGTGTTGTCGTGCAGAGCTTAGGGACCC
TCGATAGAGATCAGAAAGAGCACAAGAAGCATGTCAGAAGTGGTAATCCCGCCCACCATT
GCTTGTTTTTCCTTTACATTCACCGCTTTTGCCTTCGGGCAATGGAACTGACGAGCTTGT
GATGTATTGTGCTTGATCGGGAGCAGTCCAGCATTGGGCCCTATTTGCAAATATCGGTGG
AAAGCCGCTGCCGGAGTACATGCTGAGCAATCTTCCGCCGCAGGAAGAGTTGCTAGAGAG
GGTGAGATTGGCCTTCTCATTTTTCATCTATTTTCTGTTGGTGGGAGGACTTCTCCCCTG
TTTGTATCTGCTCTGAGAGTGCGATTGACTGATGATTATCGTTGCCTGCTGTCTTCAGTA
TTTCCATCCTGACCACATGTCGGGCGAAGAGAAGATGAAATTGGAGCTTCAGAAGGTCAG
GGATGAGTTCAAGATGTCCGAGAATGACTGTGGTTCCGCACGAGTTCAAAGTAAATTTCT
TACCCTTTGCTTGCATAATACTGGAAAACTGTGACGTATAGTTAGAACACACTGACTTGC
CAATATAGAACACAGACTTGCATGACATACCAGAAAACTGTGACAGATAGTAGAACACAG
ACTTGCCAACAGTGTCGCACTGTTGTGCCATAACTAGTGTAATATTGATAATTAGAACTC
CTTCCGTAAAGAAATGTAAGAGCATTTAGATCACTATTTTAGTGATCTAAACGCTCTTAT
ATTTCTTTAGAGGGAGTAATTGTTACATTTTGTATCACCTTTGTGTCTGGAAAAGAAGGC
GGCCATGATTTTGATAGAGGGTTAGGACTAACTTGAGGATTTCTTTTTGCCTGAGGAGCT
GATATAGCCTGTGTTAGACATAGCAGCAAGGAGTATTCAGAATTCAACTTGAACAGCTAG
TATTTTTGTGAACTGTAATGTAATATAATGGAGACATGATTCAGTTAATTCAACTGAAGC
TATGGTTCAGTTAACCTCAACATTATGTTTTGGATGGTAACATGTTATTTCTTTTCCTAT
TCTTCTGTAGCTAGTAGTAATTGATTAGTCAAAAAGAAGTCTGGCTGAATATTGTTTCGA
AATTCTGGTTCTTCTAGATTTTGGATAGTGCAAGTTCTTATTTGCCGTACTTTGGAACAT
ATCGTCATACCTACCACTCCTAAGTTTCTTCACTTCTCTATGGCTAGTTGGCAATCTTCT
TTCACTATCCTTATAGCTGTAGGAAGCAGCTTGTACATGTACTCCCGGAACTAAATACCT
TCTTGAGGTCTTGAGCAGTGGTGATTTATTTTCTGTTGAGTATTTTATGTCGTTTTGGCT
CTGCTTGCACCTTTTGTAGGCGCATAGTGTGTGTTACTGATATGCCGCGTCTTTGTGTTT
TCAGTAGCCCAACTGACACTAAAAATCAAGCACTTGTCAACTGTTCTACACAAAAAGGTA
CGTGCAATGTTGAACATCCCTTGTCAATACCCATGCTGTATCGCTTTTTTTACCTTCACA
CCACATCTGGAATCGCACAAACGTCGGTTTGGTCAAGTGACTCGTCGGCTCCTCTGTGAT
GCAGGACAAGCACTCTCGAAAGGGGCTCCAGGACATGGTCCAGAGAAGGAAGAAGTACCT
CAAGTACCTGCGTAGGACCGACTGGGACTCGTACTGCCTCGTCCTGTCGAAGCTGGGGCT
CCGCGACACGCCCGAGTACAAGGCGCCCGACTACAAGAAGACCCAGCCGAGCAAGGCGCA
GTCGAAGAAGAGCAAGAGCAAGAGGAAGAGAAAGATGAAGGCGTAGAGCTCCGCTGCGCG
GGGCAGATGATGACTCTCCACACTCTTCTCCTTCCCTTTGGCCTTGAGAACTCCGTTGGC
GGTAGAATCCATCGGGTCGACAGGCACAGAGGCTCCACATGTCTCGGCCCAGCCCGGTCT
TTGCAGTGTTGTAATTTTTTGATCCACTTCTTATGTAATAACCAGTCGCTTGACATAGCT
GCATGTTTTCCTTATTCTGTAGCAACAGAATGTTTGTTGATCCGAGGTCTCAGCTCTCCC
CCGTCCTGTTATCATCAGGCGAATGGATTGAGGAACAAACGGGATAAGTACAAGTTACTT
CATTTTATCATATATAGGGTGATTGTGATGCCTTTTTTGGCTGGCGTTGCCATGTCTGCA
ATCCAAATTGGAAGAAATTTCCGTCACTGATATCGCATAGCTGACAGCCGAAGAGCATGG
TAAGCGGCCTCCCAGCCTACAACCAGGTGTATGTCTAATACTCCTTGGCAGCTCTCCTGC
CAAAAAAAGTCATGTGTGTTTAGGTTGTCAATTTAACTTATATAAAATTAGTAATTTAAT
ATAAAAAATATCATTAGAAAATAGAACATCTGATGTTTCTAATGATATATTTTTTGTATT
ATATGCCTCTTATTAAGTTGATCAAATTGACGATCTTGACACACATGCAAAAATAATACT
CTTTTTTTCTTTTTAATTGTTTTGTCACATCATTTTTTTTATCTATGTGACACCCTTTAA
CAGTTAGCATTAATGCATTGGAAGGGCCTAGACTGTGATGGAGGGAGTAGTTTGTATCTT
TAATTCTACAACTCGTCTATCTTTTCTCTCCTCTTCACTTTATTTTAACTAGGCAAAAAA
TTGATGTGGCATCTCCTTGTCCTTGCATAATTTTCTTCCCCTCCCATATCAAACCTTGTT
TACATAGGAATGTTGCCTCTTCTGGATTGTCGTGATCGGAAACCGACGACGTTGGATTTA
GCCTTATATTTACCCCTTTGCTTCTACTTCATTGAAACTCGGCTGGGAAAGACTTTGTTG
AAATCTATACCCTTGCCACTCCCGATCATAAACCTTCGATATCTTTGGTTGTCTTCACTG
TTGACTATGTCGTTGTAGGCTCTACCACGTCGTAGGAAGACCCTAAGAACCACTCTTGAT
CGTAAAACCCTTAACATATATGAAGGTCTCCATTGTTCTTAGCTCTAACACCGTAGCTGC
TAGCACATCGTAGGTAAACGACACAATTCTTGGAATGGTTTAAAAAAGAAGCTTCCCTTC
ACTAGATTAGAAAATAACCCGCTTCACCTGTTCATTGGAAAGGGGGTGTATAAATTGATT
GCAGGGTAATAATTTATAAGCCCCAACAACTGGGAAAGATGGTATGAGAAAGCGAGGAAG
GGATGGTTTACTGTATAAACCATCAAAAGAACTGAGGTCATTGATCACGTTGTTCATATC
TTTTTTTTAACACAGTACAGAAGCAAGTGTTTATATACACGCGCATACATTCACCCATAT
GAACACACACACGCATATCCTATCTTTATGAGCACCTTCGAAAGACTAAGCTCGCATATC
ATGTTGAGATTTACGAAGTCACTGTATACGCCTTGTCGTCGATGGAAATGTCTCCTTCCA
CTGAAAGCGCATCGTCAAAAATCTTGATATAAATTCAGAAATATTTCAAACACCATGACT
TGAATCCTACTGGATTGAGGATATCAGTGTCCCTTTAATCATCCAACCATACATTGGTTT
GCATAGACAGACTATATCACTCCTTTCCGACGAGGGCAAAACCAACCAAGGCCTTGGCCT
GCCCACCTCCGTAAGAGTAATATTTTAAGACATGCGTGCCTCACCTTATTATACTTGCTC
CTATTTAAAGGTTTGCGTGAGCATATAAATCTAAGTTCTAAGCGCATCAATTTCACTGTA
GGAATTGACTAGGGAGCGGTGTCGCATATGTGCTCTCCCATGCGGCGGCTCCTTAAATGG
CCGGTCGGGTCCGATTCCCTTTGATGTTCAAAATTCAAAAAGTTTTATCTACAAA