Contig Data
morexGenes
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Map Locations of contig_62845 (4519 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_62845

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73052 1 2070 bp MLOC_73052.1 Available Available LOC_Os02g51080.1, FRAME:-2, EVALUE:0.0, 13102.m05803 protein FAD binding domain containing protein, expressed
MLOC_73051 1 114 bp None Available Available None





CDS Structure of MLOC_73052






CDS Structure of MLOC_73051






Contig Sequence (4519 bp)

>contig_62845 4519 assembly3_WGSMorex_rbca.fasta
AATCCCTTCCTATCCATGTGTTTCAAAACCCTCCTCGGAGGACTAGTGGAAGCAAAACCC
CGGGGATTTGAGAGGATTGGGTGGAACAAAGGGATTCACCCAATCCCCTGAAATCACTCC
CTCTCCAAACCTCACCAATCCCCCTTAACCAAACGAGGCCTTAAAGAAAGATGAACCAAA
CGAGGCCTTAAAGAAAGGTGGATCCTCGCGAAACCGGAGCCTCGCAGGGTGATTTCCGAG
TTCCTCCAGTGGGCTAGATGCCGCACTAGGCCTTCTCAGCGTGGACTACTAGCCTGGCAG
TAGATGGACCATGGTACCTGGTTTTACTGGACACACACCTTTTACCATGAATTTGCAAAA
TATAATCCTAACCAGCTGAGAATCATACCCTAGCCCAGAGGCCTGCAACGACTTACGGTC
GTTCCGCGATTGCCGGGCTCCAACAAGGGCTTCCCACAAAAACGTGGCAACGGGGTTGCA
TTTCTTCCGAGCTAAAGTGGATGTTGCTCCAACACAGAAAAAGGACACATTAAATAACAA
CCATATGTAGTATCAAAATACATTCATAATCACGGTACACTGTTTTCACCGGATATCCCA
CAACATATCTCCAAATTCAACGTGGTGTCTGGTTGTTGTTATCCCATTTCATTCTACTTC
TCGTTCGCGAGAACAAACATGAACAAAAAACTTGAAACCTTAGTTTATACTACATTCATT
CACATATCGAATATTGGCGTGCTTCAACAATCCAGACGAACTGTTCTGAAGTCTGAACAT
CACCGTACAAGAAAATGGGACAGGTTCGACCAAGACACGACCTCTCGATCGACGCCATTA
CCTCTTTATTCTCATCTCCTCTGCCTCAAATCCGTTCGATCGGCCGCGGATCTCTGCTAT
ACCGATCGATCCGCCGCAGCTTCGAGCAACCCAAGCAGGATGTCAGGGACGTTTCCGGTG
TGTCGGTGATCACAAGGTGAGCTTCCCCATCTCCCGGCGCAGCGCGGTGGCCCTGACGAG
GCTGCCGATGGTGTTGACGGCGAGCTTGATGTCCTCGATGGGGTTGCCCGGCACGACGCG
CTTGTAGAGGTAGCTGTCGAAGGTCATCCGCTGCACGTAGTCGTCGGCGCACATCTCCAC
GAACGCCTCCCGCGCCGCGTTGGAGCGGTAGAACACCTTCTGCAGGATGTCCAGCACCTT
GTACGTCGGCCAGTAGAGCCGGTCGAACTCCGCCAGGTACTTGCGCAGGTCGCTCTCGTC
CACCAGCCGCGTCCCGTTCGCCGACCCGGCCACGATCGCCTCCGCGCACATCCGCCCGCT
CTTGGCCGCGAAGTAGATCCCCTCGCCGGAGCACTTGGTCACGTACCCCGCCGCGTCGCC
GACCAGTGTCACACGCCCCGACACCCTGACGATGGTCCAACACGATGAGTGAGACCCCAG
TTGATCGGGTAAAAACTAAAAATTCGTTGTTGCAAGAAACGGAGGAAAAGTTTGTGCCTA
CCTCTTGGGCCTGGGGTGCTCGGGGATGGGGTGAGCCTCGACGCGGATGATCTTGCCGCC
CTCGATCTTGTCCTTGGCGCGGAGGCGGGTGGCGGCCTGGAACTTCTTGATGTCGGCCTT
GTGGGTGACGGTGCCGGTGCCGACGGCGACGTGGTCGCACTTGGGGAACACCCAGCCGTA
GAAGTCGGGGGAGACGTCGTCGCCGACGTACATCTCGGCGCGCTCCTCGTAGTAGCGCAT
CTTGTCGTCGGGGATCTTAACGCGCTCCTGGAACGCGATGGCGTACTCGTAGTCGCCCGC
GCCCATATCCTTGGCCACGCGCGAGTTGGCGCCGTCCGCGCCCACGATCGCGTCCACCTC
GAACGACCGCTTCTCGCCGCCCACCTTGCCGTTGGAGCTGTCGTAGTGGTTGTAGTGCAC
CGTGTACGTGCCGTTGCGCTCCTTGGGCTCCTCGTACCTGCGCCAGGATAAGATCGATCA
GACACTGTTTACGTCATAAACACAGGGATGAGCCACAGCTTATTCACAACGGCACTTGAT
TAGCCACTGACTTTCTACAACAATATGGCTGTGAATTTAGCATTGCATGTGTATTTCAGT
TTGTTCAGTTCATATGTCAAATATGAAATGATTTTCAGTTAGTAATCTTGCATAGGTACT
ACTCCAGCTAGTAATAAGCTGAGCATGGACTGTTGACACACATGCATACGGGCCAAATAC
AGTAGTCGACGAAGGTGAAGCTACAAAGACAGAGTCTCTCCTCTCGCGTTTTAAGTTATC
ATGTAATTCTAATGCTACCGCCACCCAATTCTGACATTGCCGCACTTCACTTATGCTCGG
TAATATATTGTCAGAATGAAATCCTACACAATGGCACGAGAAGTGGAGAACTAGTACTGG
CATGCTCAAAAAGTCAAAATCTTGCATATGAATTAGTATGATGGACGCAAGGAATGGTAT
GTATGCATACCTTAGGAAGAGACCATTGAGGACCTCGGCGCCGGCCTTCTGCGCGCGGGT
ACGGAGGAAGTCGTCGAGCACCTCGCGCCTGACCATGCCAATGTACTCGTGCGGCGCGAG
CGTGCGGCCGATGTCGACGGCGACGTTGGAGGGCGAAATCATCTTCATCTTGGTGACCCT
TCTGTCGACGAGGTCCAGCGGCAGGTCGAACTCGGACACCATGCAGAGCGGGATGGCCCC
GCCGCACGGCTTGCAGTTGTCCATCTTCCGCTCGATGAGCACCGTCTCCACGCCGCCCTT
GGCGAGCGCCTCCGCCGCCGCGCCGCCCGCGGGGCCACCTCCCACCACCGCCACCCGCAG
CTTCCGCCCGCCGGGGAGCTTGGGGCTCGACGTCGCCGCGCGGGTCACGAGGAGCTGCGA
CCTCCTCCCGCCCGCCGGCCGCGCCCGGCAGGAGGAAGGGAGGAAGGTGGCGCGCGCCGT
GGCCGCGGACGAGGAGAGGGACGTCATTCTTGCCCCGGTGAGCTCCTCGGCTGGCTCGAG
CTCGACGTGCGGTGGGGAGGGAGCGAGCGAGTGTGAGGGTCGGTGAGGCGCGAGCAGGGC
ACGCACACGTAGTGCGTACTAGTGAAGTGGGGCGGAGAGGCCGAGGATAGGATGAGGCCG
TGAGGGGGATCGCGGGGGAGGCCGGCCGTCGGATCGGCGCCGTGGACGGCCTGGATCGCG
CGTGTGGATGAGGTTTCTGTGTGCTTTCGCTTTTGCCGCTCGGCCCGCGCGAGTGGACGT
GGTTTTGCCAAGTCGGACGAGCTTGTTTGTATCGTTGTGTTGTGTACTCTGATGAGTAAT
GGGCGATGGTTTGCCACGTTAAAAACATTCTCAAAAATGATGTCCAATAAACACTTATAT
GCACGTCACTTTTGCTTTGGAAAACGGCATATGCATGTCAGGCCCGTCCTTGCATCAAGA
CCACCATGCATCCGTCCAGGTCGTCCGTCCTTGCGACGAGACTACACATGATGCATCGTC
CATGTCGTCCAGTCCATCGTCTCGGCTAGCGTCGAAAACTTGGCATCCATCACCCGGCCG
GACTCTGCCGCTGACGGTCACGGGCTCCGCAAGCAGACGACCTCGCGTGTTAGTGGTTAA
GCGAGTTCCGACGACATCGTGAGTTAGTGGCTAGCCGTGGTAGAGGATGGTGTTTGGCCA
CGTCATAATATGTGTTCATAACTTTCTTCTTTCTATTACTAGTTTCTACATGCCAGCACT
GAATGGTGTAATCGGCTTGAATATTATCTTCCGACGTTCCATCAACAACCAGAAAATAAG
AATAGCTACAATGGCAACTTCAGTGTGCTAAAGAAAATGCTTTCAAAAGACTCTCAGACT
GGATTAAATTTTTTACTTTGTGCGGGGTGAAAGAAGTTCTATAAAATCAATCATTCAAGT
TCTACCTGTGTACGCTATGATAATTTCTGGATTCCCGGCTTCTCTTGCTGAGGAGTTATC
CTGGCTTATCACGAACTTTAGATGGAGAGATAAGGAAGATAGAAGAAAAATTCATTGGTT
AGCGTGGGAGTAAGGGTCGAATGGGATTTCGTGACCTCAGATTATTTAACCAGCCTCTTC
TAGCTAAACATTGTTTGGCATTTGTTGGGTTGTTCGGATTCGTTTTGTGCAAAATTGATG
AAGGCAAAGTATTATCCTGAGGGACATATTCTTTATATTGTGTTTTCGCATTTTACATCG
GTGACTTGGCAAGGAATTATGCATTGCTTGGAACTTCTTAAGGAAGATGGCATATGACGA
GTGTGTGATGGCTTTAGCATTAATATTTGAAGGGTGGTTACCAAGTGAAAGGACGTGGAT
GTCGTCTATAGGGGGGAGGGGGTGAATAGGCGCTTTAAAATAATTTCGGTTTAGGCTTGA
ACAAATTCGAATAAAACTAACGTTTAATTTGCCAAGCACAAAACCTAAAACAACNNNNNT
CACCTATGTGCACCAACAGCTTATGCTAAGCAAGATAANNAACTAAGTGATAGCAAGCTA
TATGACAAGAAACAATATG