Contig Data
morexGenes
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Map Locations of contig_62838 (3744 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_62838

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_73047 1 741 bp None Available Available None
MLOC_73044 1 1029 bp MLOC_73044.1 Available Available LOC_Os06g17730.1, FRAME:+2, EVALUE:3e-34, 13106.m01946 protein plastocyanin-like domain containing protein, putative, expressed
MLOC_73046 1 429 bp MLOC_73046.1 Available Available None
MLOC_73045 1 352 bp MLOC_73045.1 Available Available None





CDS Structure of MLOC_73047






CDS Structure of MLOC_73044






CDS Structure of MLOC_73046






CDS Structure of MLOC_73045






Contig Sequence (3744 bp)

>contig_62838 3744 assembly3_WGSMorex_rbca.fasta
CCGGCGCTCCTTCTCCCCCGCCTTCCGCTCGGCCTTCCGCGCCGCCTGCCGCTCCTGCTT
CAGCAACTTCTTCTTCGCGCTCTTAGACAGCTGCGGAGCGTTCCCCTCCGCCACGACCCC
GGCCTGCCCGCTCTCCGCACCGTCAGCCATCTCAACGCGCCGCCGCCGCCGAGGGAGTAG
TCCTGGGTTCGGAGAGGGGTTTGGGTTTCTCCGCAGAATCTGGTGAAGGGCACGCACACA
TGAGTACTTACCGTAAACCGACGCCCTTTGACGCACTTCCAGAGAATACGCCTCTCCAAT
CCGTTAACGCATTCAACCCCCGACTCGTCGGAGAAGCTAACGCCTCCTATCGCCATGCAG
CCGAGAGCGGACAGCCCAACGGCTCCTCCCGTTGTGCGGCAACGACCCCCGCTATCGCCT
CCTGCACGTTACGCAACTGACCTGACCTCCCGGCTTCGCCGCCGCCACTCGCTTCCGGCC
TCGGTATAAAAGGCCACTGCCACCATCGGTAGATCTCACACCAACACCACTGCACTACAC
CACCACACTAGCTAGTGCCCTTGCTGATCCTTCCTCGGTACACGCCAATGGCCAGCGTCG
TCGTCCTCGCTGCTGCCGCCGCTTGCTGCTACATCCTCCTCGCGCCCTCGGTGTCGTCGG
CGTCGTCCATGCCGGTGGTGTACAGCGTCGGCAACGGGAGGGGGTGGGCCGTGCCGGCCG
TCAACGGCACCGAGACGTACAACCACTGGGCCAAGAGGAACCGCTTCCAAGTAGGCGACA
TCCTGGGTAAGCAGACGCAGTTACCGTCGCATCCAGATCGAACCTCATAGCGCTCCGCTC
TTCTTGAATCTTGATCATTGCAAAGCATTCTTGGTCGATTTATTTTGGCGGCTCCTACAT
ACTACTAGCAACTAACTTTTGCGTTGTTGGATGAATCATGGCGGCCGGCGTACGTGCAGA
TTTCAAGTACGAGGCCAAGGACTCGGTGCTGCTGGTGAACCACGACGACTACAAGATGTG
CAGCACGGTGACGCCCGTGACCCGGTTCGCGGACGGCGACACCAAGTTCAAGTTCGACCG
GACGGGCTTCTTCTACTTCGTCAGCGGCGTGCCGGGGCACTGCGAGGCGGGCCAGCGGAT
GATGGTGAGGGTCGTCGGGCACTCCTCGCTGGCCGCCGCTCCGGCCAAACCGCCCTCCGT
CGGCGTCGGCGGCCGCGCGCCCAGCCCCAGCCCCAGCCCCAGCCGGGCGGTCTGGTCCCC
GGAATCCCCGTCGTCGTCCTACGGATCCAGTTCTGGCGGGTCCACCTCGGCGACCGGTTT
CGGACCCAGCCCGTCGACCGAGCCCAGTGGGGCGTCCAGGCGGGCTCTCTCCATTGTCAC
AGGGCTTGTTGCCGGTGTTGTCACCATGATCGCGTTGGCGTGATCTTACTTGGAAGAGGA
GGGAGGTTAATTACTGTAGGCTATCGATCGTTAGGTCTGTGTCATCGGTTTAGGGAGGGA
TTAATGTTAGTCTTGAGATCCATAGGTGATGGTAGGGAGGACAATCTGTTATGGAGTCTT
AGGTGAATTACTCAGGCGAGACCTTGGTGTCATGCAATCCATTCGATCCCGTCAAATAAA
ATGGATAATAAATTTCGCCTTGTCATGTTCGTTTACCGTCGCCGTTTTCCTGTCGACCAG
AGGGTCCTCTCATGCTGCATTTTGCCAATCGAAATGGTCCGTTGACTGTCGAGCTAGTCT
CCCACAAATTGGGTGTGGTTGACTGCTTCCAAGAAGTATTCAAATTTTTCCACTATTCTC
GTGATGATTCAGCCGCCTTCATGTAGGGGTGGTAGTTGCTCTTAGATCTTTTGTGTTGGT
TTTTTTGTTCCATCTGTAGACTTAATTACCGAGATGAACTTGTTCATTCAGAAGCAACAA
AGACCTCGTCTCCCGAGACGATATGAACACCGACCTGCACTTCTAGGGGATCATCCGGAT
CCAAGTACGTTCATCTATTAAGGCTTTCCATCTTTTTGGATGGACAACTCAAAGCGCTTT
CAAAAAACCATTATTGCTAATTCATGCGAGTGAAAGAGTGGCAATATTATTGCTCCAGTC
CAATTGCAACTCTTCTCCGAAGTCTTTGGAGTATTTTTTTTTCTTCTAACGAAGATTGAT
ACAGCAAAGATAATGTTTCCAAATTTCGCTGTAAGAATTACTTTGTATTTCTTCTGTCTT
AGATCCAAATCGATGTACCTATATTATTATGAGTATGAATAAATTACACGCGTTTCTCAA
TTAAAAAAAAAGGTCACGTGCGCCCGTATGCCGTTTTGCTGCCTCCAAAACCAGAGCGTG
TGTGCTAAAAAAAAGTATACTAGGACTAAACCAAATCCGTTGGAAAATGTGCTTAATTTT
AGGCAACGTCCGTCCCATGCAGAGCATGCACTGCATGAGATTAGCGGGTTGGGGGTGCCT
TTGCGATCCCCCCAATCTTCTTCTCCTCCTGCTATATTTGACCGCCTTCCCTCTCATCCC
GGGGGAAATTTTTGCCCCGAAGCGCTTCATATCCATTCAAGGGGGCAAAATTTTCTCTCG
CGTCGTACCGCTGAAGGGAACCGCCGCGCCACCCGCCAAGGCTTAAACATGTCGGTGAGT
TGATCAAGATCCTGCGTTAATTTACGTCTATGGGCTCATCTTGTTTGTACTACAACCTTG
ATTGATCGTATATGGATCTTCTGTTAATGTCGCAAACAAGTAATGTGATGATGGATTAAA
CCAAGAAAATGGCTGTTGTGGTTGGATTGATTGATTCAGATGGAGGCTGGCCGCACAATC
CCCAAGTTCGGCGCCTGGGACGTGAACAACCCGGCCTCCGCCGATGGGTTCACTGTTATC
TTCAGCAAGGCCAGGGACGATAAGAAGGCCCCCGTCAACGCGCACAAGGCCAACAGGTCC
GCCGACAGCAAGGACGCCAGGCCCGACACCAAGATGAACACCTACAACAACTCCAGGGCC
AACACTTCGGTGAGCACCAATCTCCATCGTCGTTGAGATCAAATTTTCCTCTTCTTCTCC
CTCCTCTCCCTTAGACACTCATTCATTCCCATCTGATTCTGCAGAAGAAATGGTTCTGCT
GCGTGTCGCCGAGCCCCACGCAGCCTTGAGCCAGGAGGAGAGGAGGTGATGGAGCGGAGT
GTCGTGCGAACGCGAACGCGATGGGGGATGGAGGAGAGGAGTGTCAATGCCGCTGCTTCG
TTTATAAACAAACGTACTACTACCGTACATACACAAAAACTTCGCCACTTCGGGGATGAG
ATGAGATGAGACGATGTTGATGTAATTTTGTGATGGTCGTACATGTATGACTTCCGCATA
AGAAAGAAACTTGCTCATACCATGCGGATACATCTGCTTTCCTTTCAGATGTTCAGGTTG
CTTGCACGACCCCATCCTGGCACCGGATCTCTGCCGCAGCTTCAAGCTGAGATGCCCCGT
TCGATGTGGACCTGCCCTGCACAACTACCAGATGATATATAGGGCTAAAGTACATGGAAA
AATAATGATTCTTTAGTTGCTAATCATGTAGGTTTAGAGAATACCACATCATTGTCATGA
CTGTGCAAAAAAATGCAAGTTACAGAGCCTTGTGTATAGATAGATTGTCTCAAAATGTCC
CTCATAGTAAGGCTCAAAGCCCAACATTCCACATTCACGTCTGTTCATCGTTTCTGCACC
GAGTTCATATCTAGGTAGCCTGTA