morexGenes - Barley RNA-seq Database

Contig contig_62787
Source Contig contig_62787
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_62787 (8334 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_62787

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_73012	3	2794 bp	MLOC_73012.1	Available	Available	LOC_Os03g21250.1, FRAME:-3, EVALUE:0.0, 13103.m02545 protein glycosyl transferase, family 8, putative, expressed
CDS Structure of MLOC_73012

Contig Sequence (8334 bp)

>contig_62787 8334 assembly3_WGSMorex_rbca.fasta
TACGTTGGAGACGTATCAAGGAACCGAGTGGAGGTCTTTGTCACGCGGTGCTCGATGAAG
GCGTTGGTGAAGCCAGTGGTGGCCGGACGAATCTGACATGGTGAACTGCTACGACAGCCC
AGCCTGGCTAGGCCACCGGAGAAGACTTTGTCCATGCATGAACCTAGATGGCGAGTTCAG
CCTTAGATCCAGACTTAGCGCACAACATTGTGGGTAATTTGTCTCGGGGTTTTTTAGGAG
ACTTCATGTTTGCTTTGGGACGGTAGAGGCGGCGCTTTCCCAATTTGGAAATGTCTTCCC
AGTTGTATCCCCGTTTTGTTGGTGTGGTTATCATCGAAGTGGGGCGTGTGGTTTTGCGTC
TCCGATTTTCAGGGTCCCACTCCAGATTTGGCTGGCATCATGGTCTTTGAAGTTTTCACA
CGCGGCGTTCTCTTCTCCGAGACAGTGATTTGCTTTGCAGATCATGGCCACCGACATGTC
CTAGTCTGCATCAACGATTTCCGAAGAATTGCAGCAAGGTGGAGGCCCGGAAGCAGCATC
GAGTTATGCTCACAGCGTGTCCCCGATGGATGGAGGAACAAGACTTCAATACCCAAGTTT
ATTTTCAAGCAACGATGACACTCTATTGTCCCAGCTAATACTCCATACATCTAAGGCCGT
ACTTGGGTTGTCGTTTTCTTTCCACATATGCATGTAAACAATACAGATCTCCATCTGTCG
TTTCGCTTTCAGCCCGGAATCTGGCTCGGTAAATTACACCTGTAAATTAAATACATGCAT
ATCTAAATACACCCATTTCAAATAGGGCCTAAATATTTCGGAAGCTAGTCTCCATGTCCC
AGCACATCTTGTACTACCGTCGGAACTTGCGAGTTCAGGGTCTTGACTACATGAAAGGAT
ATGAATGAAGAAACTTATAGGCACAAAGGCTGCTGGCCATCATACTCTTCTTGAACGAGA
GTTAACAGTTCAAAAACACACCCATTTCACATCTATAGGCACAGAGGCTGCTGGCCATCA
TACTCTTCTTGAACGAGAGTTAACAGTTCAAAAACACGCCCGTTTCACATTTATAGGCAC
AAAGGCTGCTGGCCATCATACTCTTCTTGAACGAGTTAATAGTTCAAAAACACACCCATT
TCACATTTTCATGACGTAAGGAATGAACAAGAATATGCAAAGATATCCACCAAGCTGTCA
GCCTTGTTAGTTGTGACTGACAAGTTTTCTGACGAACAAAATATACTTCCCATCCACATA
ACTTTGATAAACAATCAATGTGCAGTAACTAAGAACAAAGAATTTGGGTCAAAAATTTAA
CGAAGAAAAGAATCAGCCTGCATCAATGACGTGTAAGGCACCAATTTCAATTAAAGGTGC
CACAACGCATCGCCAACAATCCTGTTCCGTAATCTAGATGATGAGAGTGACACTCCCTTT
TACCTGAAGCCTCACCACTACAGATCACCATTGTCTACTGCATTATCCTTCGACTTAACA
CTAATTTCTCTAACTGCAGAAAAAACATCCATCAAGCTCACTAATTCAATGAACAGATGG
TGTTGGATCTACTCTGTCAAAATTGATGGCTAATGACTGCTTTCCTGGTCTTTTCACTGA
AAGTGCCGCTTGTCCTCTTGGTATATAGTACAGCAGTAGACGAAACAATCTACCGTCAAA
TCTTCTGGTTTCCAGGTCCAAAGTATGCTATGGACTTACATTGCACTCGTCCATGAATCG
CTCATCTCGTGCCAGAAACCTCTTCCAGTACTTCCTGTAATTTGGTATACCCAATTCAAG
CCAAGGTTTCATATTACCATTGTAGTGCAACGATGCTGAAGTTCGGATAACTTCTTCTTC
AATTCCATAGTGATAGCCAAGCCCAGATAAAGTCAACCTCTCATCAAGGGGATATACAAG
ATTCTGGAAGGAAAGCAAGCTTATAGGTAAAGCTGCAGCTCGCAGTGAGGCCTCATCATC
ATTGTTACGGAACTGAAATAGAATAAGAGTACAAGTGATAATAAGCTAATCACTTCATGC
AAGCTGGGCCCAAATCATGCATAGACTGAAAGTAAAGAGTTTAAGACAGTATCACAATTG
CTCACTATATCAAGCACTGATGATAGCTGGAAATACTGGAACAAAACAAAATACTCCCTC
CGTTCCTAAATATAAGTCTTTTTACAGATTGCACTAGTGGACTATATACGGATGTANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGCTCCGTATGTAGACCACTAGTCAAATC
TCTTAAAAGACTTANNNTTAGGAACGGAGGGAGTACAAGGCATGCTTTAGAACTTAAAAT
AAAAGCGGGCTGGCAACAAACCAACCTTTTCCAGAAGTTGCAGGTAATTCTCTGTAACAT
TATACTCTCTCCATTTTTCCAAATTAATGACATTCAACCCAGACATCCATGCACATGAAT
GGGGATCGTACATTGCCTGGCCCAGAAGATTTCTTAGTTGGCCCAGTCTCAGGCCACAAA
ACTTGACAGCGGCATTCACCTTATCTCCCATATCAAGATTCCACAAGAAAGAGAGATCAC
GTTGAATAATGACATCATCATCCAACACAATCACCTTCTTTAAATCTTTAAATATTTCCG
GAATAAAGAAATGTGAGTGACTAAACACTGATAAATACTCCATTCTAGATTTCTCGGTAG
GTCGCTCAAAACTACTGATGAAAACACGGAATTCCTCAGGCATATACAACTGCTGCATGC
TGAACTCTGGCAAATTCTCCAAAATAATATGCTCGTAGTTAATGACATTGACAGCTGATT
CTCTGTAGGCATTTCTTGAAAACCAATGCTTCATTGCATAGAAATTTTGAGCATCGGTTA
GTACATGAAAGACTACATTCCTGGTCTCCTGCAAAACACGAAAAAGAACATGAGCAATGC
CAAACCCAGAAGATGTTCAATCAGAAAAAGAGTACAAGTTGCCTGCATACCTCAGAACTA
CTAACAGATGAGTTGATGACAACGGAAGCGGCAAGCACGTTTTTAGATAATATAACGTAG
TGCCTATGATCTGGAATTTTAAACTTATGGACAGGAGAGTCATCTGAATCCAATGTAGTT
GATTTAAAATATTCTACTGTCAACCTCATATTAAGACAATGATGACTTTTGGGCATCGTG
TGAACACCAAGGTTGTACAAGTATGCACTCTGCTTCATATGAAAATGAGCTTCATCGTCC
GTCATATGAAGTATCTGGCGAAGCTTTTTGTCAACGTTGTTACAATCCACAGTGCATGAT
TTGGCTCTTGCTATTGCTAGGTCCATCTTCTCTATCTTCTTTTTTATGCTGAAAGCACAG
GTCAAGTGTTAGTAAGTAACAAACAATTAAATGCACAGTCGTGACTGGGTAGTACTTTCC
CAGTCAAATATATCGATTATAAATTCAATGTGAACACTAAGAAAACATATACATGTAAGA
TGTGACAAAGCATAGGTAGAATTCACTAAAGTTGGATTTTCAGCCCCATGCACTGCATAA
ATGATCTGCCGTCATAATTTCAACATACAAGATGAAACATCAAATGCTAAAGGTGGCAAG
AAGAATAACAAGCATGCAGAATAAATACTCACAAGGATGGTAGATCAGCATCAACAATGG
ATTCACTTAGAACCCTCTCATGTTCTTGGATATTCTGCTTCAAAACACGAGTCAGTGCCT
CCTTTCCTTTAAGTTTGGCAATGCTCGGGTAGTAAGATCGAGCTACAAAGAGCTGATCTT
TTAGCTTTTTTACAATGGCATCTTTCATAACTTCTTTGTGTTCAATGGACCAGAGACAGT
AACTCCCGAATTCAAGTTGACAAGCCTTAGCCTTCTCCAATTCATCAGCACTTGGGACTC
TGGGACGTCTCCTGTCGAAATCCTGGAATCAATATATTCTCTAAATCATCAGTACTTCTC
TTAAAGAGTAACAAATTTACAGCTTGGGCTCAAGTAAGGGAAAGTAATTATACTCCCTCC
GTCCGGAATTACTTGTCACAAAAATGGATGCAAATGGATGTATCTAGAACTAAAATACAT
CTAGATACATCCATTCCTACGACAAGTACTTCCGGACGGAGGGAGTATTTATTAATGGGA
AAATTAAGTTATGCTTCAGAAGGTAAAGCACAACTCGTGTACAAAGAGAAACAGCAAAAT
AGGAGCCATCATACTTTTCTGGGTGGAACTGGAACTGGCACTGGCACTGGCTTCACTTGT
TCAATTTTTGGTGGGGGGAGAACTGCATACAGTGCCAATTAGTGGGTCAGCATGACCAAC
TGAAACGTGAGTAAATCATGAGAAGAAAATCAGGTAGAGAAGATGCGCTACAAACGCATA
CATTGCTTGACCATAGAAAAAAATAATATATTGTTAATTATCATAACATCCTAGATAAAG
ACACCAGCATTTGTTCAGAAATACTCCCTCCGTTCCTAAANNNNNGTCTTTTTAGAGATT
CCACTAGGGACTACATACGGAGCAAAATGAGTGAATCTATACTCTAATGATGTCTTTATA
TTCAAGAACGGAGGGAGTATGTATTAATAGTTTATTTTAACATATAGGGGCAAAAAGGTG
TGCACTGTACAACACATTATTGTACTTGAAATAAGTAACAGCAAAGATGGTGAGGTACTG
AAGCAAATTGAGTAAAAGGCCAACTATTTTTCAGTGTCCAGGTAACTGGTTTCCTACAAA
ATTATACAATTTTTTCCTGCAACATTTCGAAATGAAATATATCCAAAAGTTCACTTACAT
GAATGGAATTTGGTGCATAATTGATTGTGGCATTCTCATATATTCAATTAAACTTTATGT
AATAATGTTGCAGCCACTACTAACCTTTACCTATTGGTTCAGTGATAACTTCGGAAGGTT
CAGCGTCAATTTGGCGATGCAATGCTATATTGCCCTTGGAATTCTCTCCGTGCACATCCT
GAAAAAAAAAGAGTAAAGGATAACAAATCAAGGATTCAAATTACCCAAAGCTGTAACAGC
ACTCACTAGTAATCTATACAAAAATAATTCATGTAACAGAATTTATTTACTGATTCTATA
GCATATACTTTTCACAGCCTTCATAGTTCATAATCATGAATAAAGAGACTAGGGTGGAGA
GATAAAATATACTAGTACTACTTCAATATATCACTTTGTTTGGCGTCCCTATGGGGTGGT
TTCTAGCTGTTTGAATTGGTGGCTTGGATTATTTCTGTATGCATTCTTCATATTGTCCTA
TTCGGTCCAAGAGAGGTGGCACAGAAGAAGACAATGGTGAGAAGTGCACCAAGTTTTCTT
TAAGCTGACAATAAAACCACACTGTCCAACTCGATTTGGTCTGCTTCAAGTAACCCCATA
TACTTCAGGGATACAATCAGTCAATAAAATTTTCTTTGATTTTTTCATGTAAGAGCTTAT
GCACAATTTCCTTTCTAGCATAGCTTGCAAACCTAGAAATTGATATGAATAATCTTTCTA
GCATGGGCCTAAACTAGCTAGTATTTGGGGGGGTAACGCTACTCCAGCTGGTAACCTCAA
AGCTTATGGTGTACTGTATCTTTTAGTTTGTAGGTATCACTAGTATTAAGTTTCATGACA
TTAAAAGCGGAGAACAAACAGTGGCTAAAACCAAACACTAGAAGTGTCAGAACAAAATAC
ACACAGCGTTCCGTGGAATGATCATGTCAACATCCACCAAGCTAACAATCTAGGTGCGGT
TATACGAGCTCATCACTATCAGTACATAAGAAAAAAATGTAAAGTGACTAACCTGTGTCT
TTGGGTTCACCACATCTCTACCACCCTGCCGCGTCACTTCATGTACACTGTCTCTTTCCA
CTCCTAAGCGATCGAATGAAGGCAGCAAATTAACCTCCTAAATCCAGCACAAATGAACGC
GTGGTAGCACGAATCAGTCATATTATTCCAACCCATCACCATTTTCATAAAAGACAATCC
ATCAACACTCACGCATATAATTTTGTTAGAAAAAACAAAAGAGAAAGTTACCTGTTGGGG
GCGCTCATCCGTCACATACACTGCAACAAACAACGAAACCAATCAGAAAATTGGTCTCAA
ATAAGAAGGACAAAAAACACCAAAATCCCGCACTAAACGACAATTAACGAAACAACACTC
CCGGAACAGATCCGCCGGGAATGGCGCCGATCCGATCGAGGAAGCCGCGGCGCCACCCGC
ATTACCGAAATCCGGGCGGGAACAAGAGGGACGGGAAGCACTCACCGGCGGGGAAGCGGT
TGAAAAGGAAGGCGATCGGTACGAGCAGCGAGCAGAAGACGAGCGCCAGCACGGCCAGTC
GCGGGCCCCTCCGCCTCTTCGCCGGCGGCGCCGTCGCCTTCATAACCTCCTCCCCCTTCC
CAAGACCCTAATCTCCACCGCCGCCGTCGCCGCCGCGTGGTCCTCTACTGATCATACCAC
CACCGCCACCGCCGCGACGGGGCAGGGGCAGGGGCAGGGGCAGGGAAGCGCCGCGCAGAT
GAATGCCTCCCGATTGGGGCAATGGCACGGGGACCCCAATGGCGCCGGCGCGATCGGTGC
GTGGCGATTTGCGAGTCGCGGCGCCGGACGCTCGGATTGGTTAGTGTGCGCGAGAAGACA
GGGGAGGGAGCGGAGGACGTCGCAGGGAGAAAGAGAAAGAGAAAGAGGATTGTTTGTTTG
GAGGGCAAGAGGAGAAGTGTGCGAGGGGTGTCAAGGAATAATGGCGTGCCCTTTTGCCTC
GGCTGCGTCTCGTTTTCAACCTTTTCCTTTTATTTGGGTTTTCTGCCTTGGAGAGATTTT
TTTTGGAGTTACTTCGATTTGCTGTGCTGTTTGTTAAAACTTCCCTTAGGCCCGTTTGGT
ACCAGCGGATCGAGAGGGTTTTCTCAAGGATTAACCCTCATCGGATCCACAAACTTTGCT
AATCCTGTTAAAACTTTTCTTAGGCCTGTTTGGTACGAGCAGATCGACACGGCTTCTCGA
GGATTAACCCCATCGGGCCCAGAAACTTCACTAATCCTCGTTCCTGTTTGTTTTGCAGGG
TTTGTGCAGCCCAATCCCTTCGACCCCTTTCGTTCATCTCCTATCCATACGGCTCGCGAG
CCTCGAGGGCACCTGCGCGAAACGAAAAGGGCGAGACGCATGAGACAAAGTGTCGTCACA
TCGTCACCGAGAAGACGAGCCCACCCGTCGGGTCTTCAATATCCCGCCGCCGCCACGCCG
AGAGGAGAAGCCCCGTCGTCGCCACCGAGAGAAGGAGCCCCGTCGTTGCCAACGAGAGGA
GGTGCCTCTCCGTCGGATCTTGAACGCCCCGTTGCCGCCAGAGCGTCGACGTCCCCCTCC
GCTGATTCTTCCCGAGGTGATTCATCCCCTCTTCTCCACCACTACATCCTTTTGCAGCAG
TTCGATGCGTTCATCACAGGAGCACCAGTACTTTGGTTTGGTGTGAAACTTAACTCGTCT
AGTTATTGTCGTTGAGCTAGTAGATTATGTATGATTAACCCATCCATCCCTATTGGTAGG
TTGTGCTCTTGACCAATTGTTGGTAGAACCACCTCACTTCCTAGTCTAAGGTGGTGGTTG
TTTAGATGCGTGCATGAGAAACATCTGAAAACCATCTCACTCAATTGTTGCTCTGTATTG
TATGATGATGTTTCTTTTGTAATTTTCAGTCGTCCACTCTTAGTCATGAGTTAAGCTTAG
TGGATTGTGATTTTCAGGACATCTTGCTTGGTGCCATATATACATAGTTTAGTTTTAGTG
AATGTCCTGTGGAAGAGATGGCTCACTTCTCTAAAAGTTTATATGTGTCATCTAGCCTAG
TCTGCTAGTAGTATCTTCTATGCATTCATTATTTAATTCACCACACTTAGATTACAATAC
AATATAAATTTTTGTTAAACAACTAAGGAGGAAAATTTTGTTTGTAGTTTCTCATTACTT
AAGAAGTCGATCGTAGTTTAATTTGTTAAACAATAAGTAATAAAATTCTCCAATCTCATT
ATTCAATTCTGTTTGGCAGTGGAGCTAGCTTCTTATGCATCTATCTTTTCATATAGCTAG
CTAGCTAACTTGCTCCATTTCCATTGAACATCTCTCTTCTCATGCATCTAATTCTGTTTG
ACAGTAAATGTTGGCTAAATTAAATATATAGCTTTCTAGTAGTAACTGAAAGGGTCGATA
TGGTTGACTAGTGGGGTGAATAGGTGTTAGAGCATATTTCTTCATANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNACTAATGGTTGCCTTAAGTTATACTCGAAGGATTT