Contig Data
morexGenes
Links



Map Locations of contig_62658 (6080 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_62658

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72940 6 3234 bp MLOC_72940.2 Available Available LOC_Os04g53990.1, FRAME:+1, EVALUE:2e-125, 13104.m05576 protein ethylene-responsive protein related, putative, expressed





CDS Structure of MLOC_72940






Contig Sequence (6080 bp)

>contig_62658 6080 assembly3_WGSMorex_rbca.fasta
ATCTAGAACCGTAGCGCCCGACGGGATGACCAGCGGAGTGCATTTCGATGATATAGCTAT
GCATTTCGATCGGTCCAATCGCACTGTGCTGCTACGACTCTACCAGCTACGATCGAGTGG
CTAGCTAGCTAGCCATCTTCACTACTAAAATTACACACTCCGTTAGTTAAACAAATCTGC
AAGGACAAGAAAAGTAGTAAGTGGAATAATATGTGTTTGGCTGGTCTGATTAAACAATTT
ATTTATTTTTTTGAAAAACTGAGACTTGGCTAGTCTGAACTGTGAAGGGAATATGAGTAC
GTGGAAGAAAATTCCAGAAAGGAACAGGGCGGAGGGAATCATAACGATCCAGGACAAAAC
ATGGGGTGCCTAACGCGTGCGATATGGTGGCCTTCTTCTATCTCCATCACCCATCCCCAA
CGAAACCGACGTTTTTGGTTTTCAAATTAACTTCCAAATTCATCAAAAACACGATTCTCA
TTTGTAACAAAAAAAACATTTTTATCACCGGCAACCAAGCATTCATGCATTGACAATTCT
TACAGCAAATTAAATCAAGGGTACATGCATGCACGAACCCACCATTCTTCCAATATAATG
CTCTAGTAAAATTTAGCAAGCATTTAAAATGCACAATGCCAACGTTACTATCACTGGATA
TGCTCCGCATGCTACACATATTGTAAACTACGATTTGCAGGATCAGGGCATGCAAGTAAT
TTGCATCGGACTGTGACGCTTGAATTTTATCTTCTAGTGGTCGGATGGCTTAACAATAAA
ATAAAATAAAGGCTGATCACGGTCAGAGGATTTGCAATTATTTCCACGTTGAAAGTAATT
CGCTAGCTAGGATAGATTAGATTAACTCTAGCCGACTATAGCGCACACAGACATGACTTC
TTGGTACAAAAAGATTAGGTCCAACAGTTCTACTACTATAGTTCATCACCCCTTTATAGC
AGTTAGGCAATTTTTATCAAACATTCCTTCTGGCTGATGTAATTCATTTTACTATGTTGC
TATCTTCAGCAAGACCTCCTTTTCGGAGGTCAATGCCTTTGATTGATCCATTCGAATTTA
TACCCTAGTCTCACTCCTTTGTTTTATGTGTAAGTAAAAGATAACATATTTTATACCGAT
TCGACATATTTATCCTGATTCTAATGTGTGAAACATGCTTGGCACCCGGCATATGCCAAT
TATTGAACCTCTGCTTTGTAATCTCAATATCCCTAAATCCTAACTATTATATGTGTAGCC
TGAGACTCTAACTGAAGAATCATAAAAGAGGAGATTGAAGGATCGGAATTTCTTGAGGCT
ATAGCTAGATGTGACTTGTCTGGAACAAATACATCATGATTATTTTTTTGCATGATCTTC
TATTATTTTCAAAGATATTTTCCATAGTATTGAAATACTATAACACACATGTATTGAGGC
AATATCAACCTTTCATCATAGAATGTTCCTTTTCTTAGAAGCGTCATCGTGGATACTCAG
GTATATCTCCCGTGGCTTGGGTTTTGGGTCCTCAAGTTCTACCGAAGGGCCTTAACCAAG
GACTAGGTCACACAACTGTTGTCTAGCGGGTGTCGATGGACTCTAGGTTGGCGGCCTTGG
TAGGTTATTGAGACCCAAGGTGGCGACCCCGGAAGGCAGTGCGGCGACAATGACCAAATT
GGGTAGGAATGTGGTTTGGCATGGCAGAGAGTGGGTGGACGATTTTTTTGGGGTCCAAGG
TATGCTATCGAATGGGGTTGGTTTGGCTACTACATCGGGTCGGCATGTCCGGATGTTGGT
GTGCTCGTTGGGGTATGTAGCTAGTCATGACCGAATGTTGGTGTGTGAGCGAGTGGTGTA
TTTTGAAGTGAGAGAGCAGCAGCCCATAAAAATGAACTAATTTATCTGATCCAAATAAGT
GAAGTTTTTGGCCTAGTTTTAAACTAAAATCATGACACTTATTTTGAATCGAAGGGAGTA
GTCAACATGCGAGCTTTTCAGCCTAGGTTTCGTTATAAACAAATTAAGCCTCTCGCTCTT
TCACCCTTTCAATGTTCTCGAAAAAAAATATATTTTTTAGTCTTTAAGGTTGCACCTAGT
GTCATGAACCTAAACAACACCATGATAAGTCTTTTTCGTTGTTGGTAGTCATCTGATATC
GGTCGCGTGGAATTACACGCATACGTCAAAACCCTAATTAAGACAACAAGAGGTTACTGT
TACAACTAGTACAAGACAAGATCGAGAGTTAAAAGAGACTCCTACCGGTGTGCACGAGAG
TGTGTTGTGCTCTACTCCAGTGATGTGGGTTGTTCAACAACCGCTTGATCATGATCCGTT
GCACCAGATCGATTTCAAATTTACCAGCTGACGCAATGCCGGAAGACCGCCAACGACCCA
AGCCGATCGAGGTCAGGTAGGCGAAATTCTCCTCACCGTTTCTCTTTTCCAAACGGTTTA
TATATACCCAGACGACACAACCCCGTCTTTTCCACTACCACTGCGGTGCCCCCTCATCAG
CTTGGCTTCACCCCTTTCCCCTCCCTCCTCCTCCTTGCCCACCCAACAAGCACTCACCAC
TCCCTTGCATCTCGCTCCCATCCCTCCGAGATCGATCGATCGGCCGGCCAAGGAACGGAG
CGGTGATCGTCGGCAGATCGACGTGATGGGGGATAATCAGCTGATGCATGCTGCTCCTGC
CATGTACAACGGCGGCGGCGGTGGTGGTGCTGTGTCTCACGGCATGTGGTGGAATAGCAA
CGCGGCGGCGGGCGCGGTCCCTGCCGCGGCGTGCTCGACGGAGCTCGCCGGGTTCAACAC
CTGGCCGGCCGGTCTGTCTGCTGGTGGCTACGACGTGGCGGCGGCAGACGGCGGGAAGCA
GGCCAAGAGCTGCACCACCACGGCCTCCTCCGAGTCGCCCGGGAACAACAGCTCCATAAC
CTTCCAAGAAACGGCCAGCATCAACGACCCGGCAGCCGCCGGCTTCGCCGACTGGAATAA
CCCTTACATGTGAGTTAATTTGTTCGTTCCCACTACTTAATCCCACACATATGCACCTAC
CCTTAATTTGCTCGATCGATTCGCCGTTCGTCCGTGATCTCGTACTATCATATCATATGA
TGATGATCGATACACATGCGTACATACTCCCGTGACATGCACTGCAATTAACTAACGAAA
TCCACATGTGTATCTGGGTGTGTTTTTAACTTCAACAGGAGCAGCGGCGCTGGTAATAAT
ATGCATGGGTTTCTCCAAGTTGGCCACCATGACATGAGCTCGAGAGCGGACCAGCAGAGC
ATGATGAACGCCGTCGCCGCCGCGCCGAATAACCTAGACCTAGCGCTGCAAGGCCACCAA
CAACACCACCACCACCAGCAGCAGGACGATCACCAGCGCCAGCAGCAGCTGCTGTCCAGC
CTGGGTGCGCCGGAGCTGCTCCTGTCGCCGAACTCGCCGTACGGGTTCCAGTCGTCGCTG
CTGAGGAGCCTCATCGAGCCGACGGGCAAGCCGGCGCCGGCGGCGGGGGCCCCCCCCCAG
TATCAGTACCAGCAGATGGGCGGCCAGACAGGCGCCAGGGAGCCGCTCCAGTTCACCAAC
AACGACGCCGCGTTCTGGAACCAGTCTGCCGGGTTCGGCATGGGCATGCCAGCGCCGCCG
GCGAGTGACAACGCTGGCGTGCGTGCGGCGAAACAAGCATCGCCGGCGCCGCGTGGGGCA
AACCTTGCACTTAAGGTACGTAACCAAGCTTGGGCTAATGATTAAGTACTTACTAGCTAC
TACGATACTCTACTAGTAGTTACGAATATCTCATGGAAGCACACATACAGATGTATTAGG
TGGCTAGTTGTAATTTATGTTGGTTGTTTGTCGTTGTAGACTGTGTTAGAAGGCGTGGGA
GACTCTAGCTCGATCGTCGCCAAGAAGGCCAGCGGCGAGCCGGCGTTCAAGAAGCCGAGA
ACGGAGATGCCGTCGCCATTGCCGACCTTCAAGGTAAACATGCATGCATGCTCATAGAGT
CATAGTCATACCTAAAAAATCATGCATGGTTAGGTTAACTCATGCCACTTGGTCCTCTTA
AGCACCATAGACATTATTTGATGCTACATATATATACATAGACGCAAACCCAGGTCGATG
CATGATGCATATCTTTATCGACTGATTAAAGTTGTGGATGCAACACATCTCAGGTTAGGA
AGGAGAAGCTAGGGGACAGGATCACAGCGCTCCAACAGCTCGTCTCTCCTTTCGGAAAGG
TATAAGCTTGCTTGCTAGCTTCGCTTAGCTAGGCTTTTCATGCATGCATGCATGCATGCG
CATATGCATGTCCGATGTGTAAAATCACATAAACAAATGCTAGATATATTGCACATGACC
TTGAGTATCATCATCCAATGTGCATCTCCTCTCTGCAAAAGCGTTCATCCTTTCCTCCCC
TCCTTTCGAGATCTATCATCCAAAAACACATGTGTGGTAGAAGGAGTATCTAACACACAA
TCTCGTTGTGCGTGCGTGCTGCAGACGGATACGGCGTCGGTGCTGCACGAGACCATCGAG
TACATCAAGTTCCTCCACGACCAAGTTGGTGTAAGTGCACGTTCCAAGTACCCACATACT
ATGATTCCATGCCCCCATGCACGCACACGCACGCTTTAATCATGGCGCCCGGAGCACGCA
CGGGCTCTATCGGTTTCCTCCCACGATCGAATCATCCACCAGGAGACTCCATTGGAGACC
GAGCTAAACATTTGTCTCTGCAACCTTGCATGCAGGTGCTCAGCGCCCCATACCTCAAGA
GCGGCCATCATCAGCATCAAGTGCCACAGTACCTCAAGGTATGTCCATGTACATCCATGG
CGTGCTTGTCAGTCTGCTTCTCATGGCTCCTGCATGCTTTGCTCTCTCTCTCTCTCACTC
ACTTTCCATTGCACCATGGATACTGCATGCCATGTCAAGTCTCAAAGCAGTTGCATGTCT
GATGGTAGCTTTTTACATGTGTCTGGTCGCAGAGCTCGAGCAATGGTAGCCCCGACAAGT
CGTGCAAGGACGGCGGTGAGGTGTCGCTCAAGGGCCGGGGGCTGTGCCTGGTGCCGATAT
CGAGCACCTTCGCCGTGGCCAGCGACGTGCCCGTCGACTTCTGGACTCCCTTCGCCCCCC
AATTCAGGTAGACGGGGAAGAAGAAGGCTTGATGAACGTACGGCTCCGATCCGATCGATC
AGAAGCAACCACGCACCGATCGATCCGACGACGACGTTCCTCGATGATCTTGGTCGACGA
GCTATATATCTAGTAGTAACAGCCTATGATCATAATTTGTAACATGTAGTAGCACCACCA
AGGAAGGAAGCTTGATTAAATTATATGGCTAGCTAGCTAGATGAACCTTTGGAATGAGTG
CTTGAAGACTTGGGCTCATTCTTCAGGTTCATCGTCAAGGAATAATCTATCTATTGACCA
AGGGATGATCTGCTAGCTGAGAAGATCAGTACTACTAGTGGATTATGTCGCGCCGATCAT
TCGATCGTCGTCGTATGATTGGTTGTTAGGTTTGCATCATTGGGCAGTTGTGGAACAGCT
TGTTTGAACTAAGAACTACTACTAGTGCTTTAATTAATTCAGTGATGATGGATCAAAGCA
GATCTGTCTGTAGCAGGTTTCGTTTCTCTCTTAAGGATTTGTACCAGCTACCAAATAAAG
AAGTGGCGTCTCCCCTTGATTTGGTCTCAGCATGCGGCTTACACCTTTGGATCTGACCGC
ATGCTCTTGTTTTAAGTAGGGCTTCCAGAATTTGCGCATGCTTGTGTCTTTTTCTTGAAT
ACTGCCTTCCAGAATCTTTCAGGTTAGACTATTCCATTTCTGCACTAGTGGATATCAGCA
TGCGTGTATAGCTTCTACGTACGCAGGCATGCATCTTACATTGCATTCCTCTCACCGGTG
CCAACTCGCTGAAATAGTATCCAAGCAGGAGTATTGGTATGTTGATGAACTCAATAGAAC
CCTCCCTGTAGCAGGTCAAAAATTCACTCTCGCATACTCGCAAAAAAAAAAAAATCACTC
TCGCATACTCGCAAAAAAAA