Contig Data
morexGenes
Links



Map Locations of contig_62581 (6308 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_62581

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72903 4 1772 bp AK356979 Available Available None





CDS Structure of MLOC_72903






Contig Sequence (6308 bp)

>contig_62581 6308 assembly3_WGSMorex_rbca.fasta
AGTTTTGTTGGGGGGGGGGGGGTTCTGGTATATATAGGATTTTCAGCGTTGGAATCACAC
CAAATGGAGCCACGTGGGCCCCACAAGCCATCACAGCGCGATCTAGGGGGTGCCCTGTTG
GCTTGTGGCCTACAAGTGGCTCCCCTCCTGAGGTTCTTCGCTCCAATATTGCTTACTTCC
TCTAGAAAAAATTATAAAAAAATGTTTAGGCGATTCAGATAACTTCCATTTTCTGCACTA
AAACAACACCATGGTAATTCTGTTAAAAACATCGTGAGTGCAGGTTAGTTCTAAATAAAT
CATATATACAAGGTGAATCAAAACCATATAAAAGTATTATAAACATATGCACACATGGCA
TGAATACTTTCTAAATTATCGATACGTTGGAGACGTATCAGGGGGCGGGGCTGGGGCCCG
AGGCACGACTAGGTTGCGCCGAGGGCGTCGGGGGGACATAGCGAGTGTGGCCTCCTCGTC
CGTGTGGTGACCTCCCAACCTTCACCCGGGGCGACCTCCCCATGAAACGACTCCTTCATG
TGCACCACCGGGTGGATCTCAGAGCGGGGGATGCGACACACAACCGACTTAGCGTGGGGT
GGTGGCAGAGGTAGAGCGGGTAGGGCGAGACGACACCGAGCACATCATGTTGTGGTAGGA
AGGGATTCTTGATCCTGCGGAAGATGGGCTCGATTCCATCCATTCGAGCTCCCAAGAGCG
ACCCAAGGCGAAGGGTGGCGGCATGGCCATCGGGAAGCGGTGGGTGACGAGGCCGGAGTG
GCAGCTGATGCGTGCGGGTGGGCGCCGAGGCCGTAGTGGCCAGCAACACGATGGGAGCAC
AGTTTCAAAGCTCACTACCCCCAAACAAACACCCATAAAACGTCAAAGCTACAACCATTC
TAACTGATATGCTACAGCCGCGAGTGAAAGATGTTGCGACCGATGAGATGACATGCTACA
ATCAATGAGGGACAACATGCTACAACCAACAAGACTGATGTTGCAACCTGTAGGAAGAAA
TGTTACAAGTAATGGGAGAAAATGTTACAAGGCCGAGTGAGACTTAGCTAAATCTCAGAC
GATTGAATTTTAGAAAGCGTGTAAATCATTTTCCTCTAACCCCTATAAGTGACCAGTTAA
GTGTCAGTTAGTGGATGAAAAGTGAATTTCACTCGTTTAAACCTCTTTAGGGATTCTAAC
CCTCCAAGTTATAGCCGCCGTTTCAATTGTACGGCGCTTACCTTCGTTCGGAATTACTTG
TCGGGTCAATGTATAAAAATGAATGTACTTTAGATGTAGTTTCTAAAAAACAAAAAAGAT
CTAAATTGGATGTAGTATCTAAAAACCAAAAAAGATCTAGATATATTTATTTCTATGACA
AGTATTTTCGAATGAAGGGAGTGTGTTGGAATAAGCACGGGCTTCCCAGATGTTCTTAAT
TGCGCCGAGCGGATTTATTCCCTTACGGCTTGTTCGTTTAATACCTTTCCCAAAGGGATT
GAAGAGATTTAAAGGGGATTGGAAAGGAATTTGACTTACAAGGAATGTAGTTCCTCATAA
TCCATTTTAATCCCCGTCAAATCCAATGCAACCGAACAAGGCCTTATGAGTTTTCTTTTT
TAAGAGTACAATCCAAAGAGTGCCACACGACCCGGAACAGTTGGTTAGCTAAACCAGCAC
CATAATCCGCAAGCATGGCCACTTGTGTTATTTAAAAAGTCCCTACCTGTTTGATTTTAG
GAACTAAACATGGACCAGATGTTATTAAATGACATGATAAAAGATCATGTTATCTCTATT
AATAGAGTAGAGGTTATTAAATGACATGCAAAAAACAAGGACACTTTTAAAAAAAAGTCT
CAAAAAGACTCTCCGTTAAAGACTTACTCCCTCCGTCTCAAAATTCTTGTCTTAACTTTG
TCTAGATATGGATGTATCTAAATATTAAAACTTGACTAGATACATTCATATNNNNNNNNN
NNTAAGACAAGAATTTTGAGACGGATGGAGTATTTCTTTAGTTTCAAATGCTCACTTTTA
ATCCCAAGTCCCTCATGTTTGATTTTAATAGGACTAAAAGGATTTTTTATTAGTTTCTAT
ATAAAAAGTCTCTGTAAACAAACACTTCCTGAATAAGCACCATAATCCGCAAGCATGGCC
ACTGATCATCATCACCACCGGTAAAACACCAAAGATTCTTGCGTCAAGAACAGCCACATG
ATTGGCCCAGAAAAGGCACTAGGAAGGCATGACCCGTCAATAAAACAGTCTTTGCCTTCG
TCTCAACGCCTGCCCATCGTCCCCAAAAACGTCAACAGCGGGAGACGGTTGGAGCGACGG
AGCTTTCATTCATTGTTGCTCCTGTCATAACGCCGCACAGCGGCGAGCCATGCCACGCCA
GAGCTTCCACGGTCCCCATGGATCGTCTCTAGCTATACCGTGCAATGCATGGGCGCTTAA
ATTATTGGCGCAGGCACCAAATCCAGCTTAATTAGAACGTACCACGGGCAAGGAATTCTT
GTGCAGGGCACGGGCAACTCTGGACGAGCGGAGCTAGCATTCGCACAGCACAGCCAAGGC
ACTGACAGCTTGGTGGAGGGTACAGCGTACCATCGACTGTATGGATGCTATAGGAGCGCG
GCTGGATTGCTGTTGAAGAATGGCAACAAAACTATTAGGGCCGTGACCACCCAACGACCC
TCTAGGCCAAGCATGGTCGCGGACTCAGTCCCAGCGCTAGCGTCGAGGACTTCACCGAGG
CTATGTTTCCCTTTGGTGCATCCAGTACGTTCCTTTTTAGTAGAAGAAGGTATACGCGGT
GCTGCCCGTCAGGAATCTCATCGGCACGCTTCACAATTCCCTTGTATTTTCTCTTCCGTT
AGCATGCCCCTAGTAGTTCGTACGAGAATTTCATGTGTTTTTTACTAATCACCGACTCGT
GGATCAAGGTCATGCATGCTAGTGGAGTACTCCCTCCGTTCCATAATATAAATCTTTTTA
GAGATTGCACTAGAAGACTACATACGAATGTANNNAGACATACTTTAGAGTGTACATTCA
CTCATTTTATTTGTATGTAGTCTCTTAGTGAAATTGCTTAAAAGACTTATATTTAGTAAC
GGAGGGATAGTACGGAGTGGCGTACAGTGACTACTGTACATGCATCCGGAGACAGCCGGC
CATTTTTCTTCAGAGTAATCGCAATCACCGGGTTCGCAGCCACAGCGGCATACTATGCCG
GTCGACAGGGACATCGACTAGATGCCAGAGCTACCGCGAGGCCACACGTCGATCGAAACC
CGCTGTCAAACTCAAACACGAGATGAAAAACACTCCCTGTCCGATGACGAGCTCCTTGAC
AACTCGCTCGCTCGCTAGATCCTCTCTGCCTGTTTGCCTCCATTTGTGCGTCCATTATGA
AACGAGCCGAAAGCCGGGAGGCGAGGACGGCACTATACCACTAGTCTATTACGGGCGGCG
GGCCGAAGCTGGTGCGTGCCGTCCCCAGCCAGCAGCGCCACCCGGCCATCACCATTCACC
AATCCAGAATAATTAAGCTAAGCTTCCACCAGTATTGTAATCGTACTATATGATCAAGTT
GCAATGGTCTAGGAAAGGTCAGCACAGCACAGCACAGCACAGCGGCGTTGCGTCGCCGGC
ACCCACCGTCGCCGACGCGGAGATCGATCGCTGTGCCGTACCGCGTGCACCGTCCGTCCG
CCATTCGGAGTTCCGCCGGTGCCATCGCGTCATCTGCACGCCGACGTGCGCGTGAGGGCG
GATTAATTAGGCTGATTACTAGTTTACTCTAGACTCTCGAGGCTCCACTTACAGTGGTGC
CAATTTAGCACATTCCCGTGTCCTATCAGTAGGAGGATCACGGAATGATGTCTTCTTTAT
TTGTACACTAGGCGGTAGTTAGCCGGAGCCAAATGGAACTGGGTTTGCCCATGCATGTAC
TGGATTCCAATGGCTACGAGACACCCAACTGCTTTAATTAACAGAGGTAGCAGCTCACCA
GATAGGCCCGGGGCCTGAACAGACATACCAAACGGTCCACCCGCTGACACAGCGCGCAGG
CGTCAGGCCACCCCACTGGCTAACCGTACTGTACCCTCTGTACTAACACGGTCCCTGTTG
CCACCGAGAGCCCGTGACATACTGCATGCACCCAAATCCAATCCTCCTCCATCCGTGCAG
GTGTACGAGTAGTGAGCAACTGAGCAACGATCAAACAAGATTGCCTACGATCTTGACCCA
GTTCACATGACACGCTCATACAGCAACTTACACTCTTTTTTTTGGCGGGAACACTTAAGT
AGTAGCAACTTACACTTAACCAGTCAACAAGAGCAAAGTAGCAAGTACTCCTGTTGTCAA
CGCTGATCTGATCCGGGAGCACTCTGCACGGTAATAGCAACACAAAAGCTCAAGCCTAAC
AAACTGCCGCCACTAACTTTACTGAGCAGCCGGCGACCATGTTGTCAAACAGTGGTCACA
TGGCGGCAGGGTTCAGTACTTGACGGGCATGCCGAGCCGGTCCAGCCTGCCGGAGCCAGG
GTAGGCCTTGTTGGTGAACTTGGCGTGCAGGGACGACGACGACCTCTGCCCCGCCGCCCC
CGGCGCGAACGCGTGCGCCGACGCCTTCCGGAGCGAGCCGGACTTCTCGTACAGCGGGCG
CTGCTTGGGCGCGCTCTGCGACCGCGCCTTGGCCCGGAACGACTCTGTGTTGGACATGTA
GTTGGGGTAGTCGGAGTAGCCGCCGAAGAGGCTGCGCGCGCACTCGCTCTTGGTCGGCGT
GAAGAAGGCGCCCCGCTTCGAGCTCCCCGGCCGCGACGTCGCCGAGAAGAACTGCGGGCT
CTCGTACAGCTCCGCCGCCGTGTCCGCCGGCATGCGCAGCGGGCTCAGCGCCTCCCCCGC
GCCCATGCCCATGCCCACGGAGGACGGGCTCGGCACGGACTGCTGTGCCGTCGTCGAGTC
CCGGGACGGCGAGTCCGGCATCGTCGCGTAGCTCCGGCTGTTCTGCTCCGATGTCCGGGT
CGAGCACGACGACTGGTGGTGGTGGCCGCCGCCGCTGCCCCGCCTCTTGGAAGCCGCGTG
CCGGCCGGGCTTGCCGGGGTCCACCTCGAGAATCTTGGCGTTCTTCTCGTCATCCATGTA
CCTCTCCTCCACCCACCGGTCCAGCCAGTTCCTCCCGCAGGATTCTGACCTCTCCCTGCT
CATCCTCTCGCTGCCCGGTGTCTTCGACGAGCCTCCCTGCATACACCGGCGCCATTGTCA
CCACGGCCATGAAAACTCACAAACGCAGAGACCGCAACAGAGAGAGCAATACCTTGAGTG
AGCCGGAACGGCCGTGCCTGAGCGGGCCATCATATGCCGCCTGCTCGTACTTCTCCGGCG
TCGTCGCCCCCTGCAATGGAGAGCCGAAAGCCCATAAGAACGCGCCGAAGACATGAACTT
GGCAAGACATGACGGGTAGGGAGTATATGCAATTACCGGGTGTGCCGCGGCCTGGCGGGA
GCGGGTGGCGCGGCTGGCGCGCGCGCGGGGCTGCACGCTGACGAGCGCCTGCATGCACCG
GAGCGTCTCAGCCGCCTGCCGCCGGACGATGTTGCCGCGGACGAGCGCCTGCAGCTTCAC
CAGCCCGCGGAGCGCCTTCAGTGCCCGCCTCGCCTTCACACGCAACGACAAGCATCCAGA
GGTTAATCAGCACTGGTCCCATCCCATCCCGTCCACAGCATAGCCATGGGCATCTCTGCA
TTGTTGGCAGGAGGTTGACATGCCAACCACCTCCGCCATTACTACTACCGCACTAGCAGC
TTCCAAGAACAGTAACAGAGTTACATTGCGCAAACGGCAAAAAAAGAAGCGGCTCCCTTG
TTCTTGAGAAGGGGACGCCCATGCCTTGCTTCCCCATAAATGAAGCTCAGGCTAGAGACG
CGGGAATGGCAGAGCAGAAGAACAAGGTGGCTTCTCCTAGCTTGAGAACACACACCCACA
CCACGGCGGCTGGCTTGCATACACGGCCACACGGGCACGAGGATTTCTTTCCGGGAAGCA
AAAATCCGAAAACATTGTAAGAGAAATGGGAGCGCTTTTTCCGCTTTACACCCGTAATTT
TCAGAAACTTGGCCTACGGAAAGCGGATTTTGGAGTGTAAAGGAGAAGAATTGGAGCCGA
AAGGACGGCGGGGAGGAGCTTAGTGCTTACCAGGTAGCCACGGAAAGCGGCCTGGATCCG
CACGGCCGCCCACTCCTCGTGCTTCGCCCCGGCCGGCGGGCACCGCCCGCTGCTGGTCAG
CCGCACAA