| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_62579
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_72900 |
1 |
197 bp |
AK358046 |
Not available |
Available |
None |
CDS Structure of MLOC_72900
Contig Sequence (4623 bp)
>contig_62579 4623 assembly3_WGSMorex_rbca.fasta
CATACATTAGACGAAGTTATACGAGCACTAAGTAGAGATACTACTTGTGCATCCATAACC
CTTAAAACCAGTTTCTTGCCATGAGAGTCCACCATATCTACCTATGGATTGAATTTGATC
CTTCAAGTAAGTTGTCATCGATGCACAGAGCAATAAAAATGCTCCTAAATATGGATTATC
TTATATTATAAAGGAACATAAGATTTGTACGATCTTGTGATGGTGAAGAAATAAAACCGA
CATACTGCATAATAAAATTTGGTATCATAAGGGGCAATATAAAGTGATGTTACACTTTAT
GATAATTTTATTATTCTTGATCATTATTCCATTTTGTGATACAATTCTTATGCCCTTTTT
CTATGAATTTACAACGTACATCACAAAGAGGGAAATTACCGGGAATTCTGGACCTTAAAA
GCAAGAAAAATGATAAAAGTTATGTGGACTCCAAACGACCTGAAACTTCAAGGGGAACTT
TTGTGGAAAATATCTGAATTTATGGAGGAACGAAGTATCGGAGGGGGGCACCTATTGGTG
CCAAGCTAGCAGGGCGCGCCTAGCCCCTAGGCATGCCCTAATGGCTTGGGGCCACCTCAT
AGCTCATCCGGCCCCCACTTCTACTATATTATGGGTTTTGACGTAGAAAAAATATAAGAA
GATACTTTCGAGATGAATAGCCGCCGACTCAAGGCGGGAACCTGGGCAGAGGCCCTTTTG
GTCTCCGGTAGAAAGATTCTGTCGGAGAAACTTCTCTTTGGGAGGGGGAAATCGAAGCCA
TTGNNNNNNNCAATGCTTCCTCCTTCGTGGGAGGACTAATCTTCGTCAACATCTTCACCA
GCACCATCTCATATCAACTCCTAGTTCATCTCTTGTATTTAATCTTTGTCTCAAAACCTG
AGATTGGTACCTGTGGTTGATTACATCTTGTAGTTGATGATAATTGGTTTACCTGGTGGA
AGATAATATGTTCAGATCCTTTATCATATTTATTATACCTCTGATCTTGAACATGGCAAT
GATTTGTAAGTAGTTGATTTTGTTCTCGAGGACATGCGAGAAATCTCGTTATAAGTAATC
ATGGGAAGTTGTTATTCGTTTGATATTTTGATNNNNNNNNNNTTGTTGCTTCCTTTAGTG
GTGTCATATGAACGTGGACTACATGACACTTCACCATATTTTGGTCCTAAGGGAAGGCAT
TTTTGAGTAACTCGCAAAAATGCCCGTGCGTTGCAACGGGAGAAAAAGTATCCAGGATCC
TCCAAAAAAACAACAACACATCTAAGTTGATAAATATCAAAGTGAAAAATTGATACAATG
ACAAGCCAAATTCTATCATGCTTCTATGCTAGCAAAAGGTTTGGCCGTGTAAAGCATATC
TTTTGCAGCATAACCCAAACAAATACAAAATACGATGGCAACTAAGTATATCAATGAATT
CAGTTGCATACCTTTGAGTCGTTGATTAATATTGTACCACTGTTCTTAGATAGGTTACCA
TGTCCCTTCCTGAACTGAAACACCATTAAACAAAACATAGGACAATGACAATCTCCATTT
ATCAAACAAAACAAATAATGGTACTTAACTAAAACAATAAATTTGGTCTCACACTATCGT
TATTACAAATGAAAGGTTTTTCAACCATTAAATACCAAGACACTAATTAGTATTAGATGA
GTTGGCAAACATGGATGGATTAGCCAACTTTACCTGCAAATATTAGACGCATAAATATTT
TATTTGCCTAAGAGCAGTGTGCATGTCCATTGGCATTACAAACCAAAGATCTGGTCTTGT
TTCACATAAACTCATGTAAAGTGCCGAGACATACGAGATTCCTAAATCGGGATTGCTGAA
AACCCACCATAGTGTGCATGTGCAACATTAAATTTAGACAATATATGACAAGATATGATA
GAAAAAAGCAAAATGCATGTAGAAATAATAACTGAATTTACAACACTATAGTTGACTGCA
ATAACATACTTGTGCCCCATAGCCATCAAAATTAGCTAATTTGGCCCGAGTTGTTGAATT
TCTTGCCCCATCAAAATCAGATTCTTTTCCATTACTTTCACTTGTTCCACCAACTCCAAA
TTCCACTTCCACATGTTGTAATTCACACGCATTCTTGCAAATAAATAGAATTATACAAAC
CAATGATATTCAAAGTTTCCATTCAATAGATTTACCGGGATACTTGAGAGTCTAGTCCAG
CAAAAGTGACCGTGTGTCGAGGTGTGTACCTTGCATGTGTAAGTTCCTGTTATCTATATG
ATTTGTCCCTACTAAGCTCATGCATGAGTGATGCACCCTTTCTAGAGAGTTCTTTCGTAA
CCGCGAGGAGCTTCTCGATTTCAGCACATAGATGCACATCTAAGTTCAGCTTCAAGCTTC
CTTCTCTTGTCAACGAGCTTGTTGATCATAAGCTCCATTCTTGTCATTAATCTGTTCGAT
GATCATGTTCAGGTGATGGAATTCCTCCTTTATTTCTTGGTAACTCCATCCGTTCCTCGG
CTAGAGCACGATGATCAGCCATAAGCCTGCAGAATTCAACCTCGTGCAACTGAATTGGCA
CTTGGCAAACTATTTAGGCTAGATTTACCAAACATTCCTCTTACCTAGTGTTGCCACTCA
AATGAAAAAAACACCAGTAAAGGAGTGCACACCCATCCTTGGTACTAGGTAGTCACTTTA
TCTTCTCTACAGGATTTAGCATGTTTCACAACCTCACTTCAATGCAAATAAAAGAATAAT
AACAAGATGCAATGAAATTTCAAATAGTATATGAGGTTATTCCTGTTGATACATAATCAT
AATAAGATTTGCACTAATAAGGAAGTTAGAGGAGAGGATGCTAAATTGGTGGTCCATGAT
CTTTTAGCTATAGGTATATGCATTATATTGCACTAAAAATAGAGAGGGGAAATACTGGAT
GTGCAGCCAACTCTTGCTTGCCCTATACTGTATAAATTACCCAAAGAAGACCAAACTTAA
CTAAGTATCAAATATTATATATTGTTCACTTAAATGGTCAAATATGAATGGTTATCGTAC
TTGAATAATGGACATATTCAGACACATCTAGCAGAGCATATCTCTACCTAAAATTAGGGG
AGTGATGTGGACTTTTAGCCTGATTCGGAAGTTGACATTGGTGGGGGTAGAAGGGGAGGT
TTGCTCAAAGGGTTTGGAATTTAGGGGCTAAATACTTTTAGATTTGGTGAGGAAATCATA
GACAAATGAGTGCCATGAAGCTTGTTGTCCTTGTTATCTTGAAGCGCGTGCACTACAAAA
CAAATGTCACTACACTGTTGTACTACTCCAGACCAAAATAAATCAAGGGGGCTATGATAA
ATCGTGCTATACTAATACTAATCCTTCTCTACCAACAAAATGAGTTCCTCTAGATGCAAC
CGCCCAATCCCACTATATGTAGAACACGGACAAGAACACGGACGCACAATGCTTACGCCT
TGCAAAGTCCCGCCGTCACTCACCTAGATCCGAAGGTCGTCGTTGTTCCGCGCCTTCAGC
CTGTCTATCGCCGCCTTATCCAAACCTCACTTGATTAGATCGAGAGGGAGAGCCACCTAC
TACCCACACGCTCGTTGACTCGCCTTAATGGAGATCAATCGGGAGGAGACCCTGATGCTT
GACCCAGCCTGCCTCCTCCGAGTGCGCCTCCTGCCTCCCGCCTCGCTGTCGCCCCCTGAT
GCAACGCCTGAGCAGAGCGCCGCATCCCCGCCATTGACTCATATGGTGTTTGTCTCATGC
TATTGTTGTGATGAATTGAGTCTTTTACTTTAAGATCTCATTATGTTGGATTGAATATTC
AGGTATGAGAGCACATGATATATGTCTTGCATGTGGATATTCGTAGTGACATTGGAATAT
TCAAGTGATTCACTTGATATATGTTGTGCCATCAACTCGCGAAATGCCGAGGTGACATTG
GGGTAATCTANNNNNNNNNGTTGATTGCACATTTTCATACTATATTTTCTGATAGAAATC
TTGGTGTGCTCCTGAAGTTCTTTGTGTTGGATTGAGTATTATGAATCTGAATTTGTTTTT
TTTGGGAAAAGGAGGAATTTAGTCCCCGGCCTCTGCATCAATCGATGCATGCAACCATCT
TTATTAATATAGTATCAAACATAGTCTTAAATCCACAATGTTCTGAAGCTCAAAAGCAAT
GAATCTGAATTTGTTATGGTGTTATTTTAGTACAAACTCTTGATAGATTGATTTGAAAGG
ATAACTTGTTATCTTAGTATGAACTCTTGAAAAAATTGATTGGAAAGAATAACTTTGAGG
TGGTTCCGTACCCTACAAACAATTTCTTTTTATATTCTCCACTAGATAGGAACATTGAAG
TGATTATTTATCGCACGTTCAGGGATTGTTATGTGATCCAATTATATTATCATTGTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCTAAGCCTCATTTTCAAGCATTGCAATACCATTT
ATGCTCACTTTTTTTACTTGCTAATTTGTTTTTTTTATTGTTCCTATTACAAAAATAATA
TCTACTATCATTACTACACTTTTATCACCATCTCTTCGCCGAACTAGTGCACCTCGTAAT
AAC
