Contig Data
morexGenes
Links



Map Locations of contig_62552 (4941 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_62552

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72881 2 1071 bp AK373696 Available Available None





CDS Structure of MLOC_72881






Contig Sequence (4941 bp)

>contig_62552 4941 assembly3_WGSMorex_rbca.fasta
AACGTCTGTGAGGCAACTCATCAAGTGGTAGCCTCCTGAAATCACAATTTAAGTGAGATC
AGTATGACGATCATATGCAATTAATCCAACGTTGGTCAAATTAACCATACAATTGTCTAT
GCAATTAAATCTATATTACCGTTGAATTTTTTTTAGAAATAAATGCAATTTGAATTCTAA
TGATGATAAAACATGATTATGTTATTAACAACGTTGATCAGAAAATAACAGAATCATATT
CTTTCTTAATAAACACTCTAATATGCTCCTTTTAATATGTTATTTGCTTTGTGAAAAGAG
CACTAAAATAAATAATTGGCAGCTGAAAACGTGAATATAAAATTCATGTACTTTTTCTAC
TTTACAAAAAACATTTCTGTTACGAAATAAATATTCATGAACTTTATTTTTCTCATTATA
AAATCCATGCACTTTTCTTTTTCTGAAAATGTCTCTTTTTGTTTTTAGAAACTTTTATTT
TTCTTTGCAGAAACATTTCTGTTTCTTTTCTATTTTATAAACAAAATTTTCGTTGGAAAA
AATTGCATAGAAGAGGAATCAAGACTATATATATTGTTTTTGCGTAAAACGGAACAAAAA
CTAAAAAGAAATAGAAAACTGTTGGAGCTCCTCGGGCCGAAAACGGCCTGCTCCCTTGCA
CCTCCTCGCATGGGGTGTCGGCCAAACTGGCCCGGCCAGGGCTAGGGTTTCCCTCGCGAC
CGTCGGATCAAATCCGACAGTCCAACGCGGTTCTAGCTCGAACAAAAGGGGTCTGGGGCG
GCTGGGGAAGAAAACCCTAGCTCATTCTCCCCCTCGTGCGCCGCTCGCCTCCCTGCTCTC
CCGCAGCCAAAGTTGTGAGAATCGCGACTCAAGTCTTAGAATCTTACGACTTTACAATCC
AAACTAGCCCCTCTGATTCTACGATTTTGCTCATAAAATCTTAGATTCTACGATCGTGAT
AGTTATGATTCTACAATTCACGATCCTAACAACAGAGCTCCGATCTGATTTAGAATCGCG
ATTCTCACAACCTTGCCCGCAGTTCTCTCTCTCTCTCGCGCGCGCTCGGGGCGAAGGCGG
CGCGCCGGCGACGACGAGCTTGTGCCGCCGCGAATGCCCGGTCTTCTCCCCCTCTTCCCC
ACGCCTCTCGCGTGTCTCTGCGCCGGCCGGCCACGCCGATGGCGCGGGAAGCCACGCCGG
CCACCGGCGACGGCGTCACGTCACCGCGCCGCGCGAGCCGAGCTGACCCTTTTCCCCTTC
CCTTCTTCCTCTCTTTCTCCACCACCCACGTCTCCTCTCTGTGTCACCGAGGACAACGAC
GACGTGAAGCAGCGGTGCCCCCTCTGTCCCCATTGCCTGTGTGCGCGAGCTCCCGAGGTT
GGGCGCGCCACCATCAAGCGGTGCGGTGGTGGTGCCCTTTTGCCCCCTTGGGGAGGCTTT
GTTCTTCTTCCCTGCACCTCACTTGCCGATGCGTGTGGGGATCGAGAGGCACTCGCGCGG
CCTTGCGGCGACGCTCTTTGCCGGCGAGGCCTGAAGCCCTCTCCGGTGAGCTTTTGCTGT
TTTTGTTATCTTTGCCCTGCTTGGGTTCTTTGGGGATGGGGAGTTCTTTTCTGTTTTGTA
CCGAAAATCCTAAACCAATCTCTGGCTGATACCATTGATGCAACCACTAGATCGTGTAGG
ATAGGATTCCGGTAACAATAGTGATAGGTTTTACCTTGTCCTGCACTTGAGGTGCTCCCA
CTGGCATCCATGGTGAGATGATGACGGCGACGATGACAGAGAGATGGAGAAGTGGAGGTG
GTGCTTCCCGTGAGCATCGCACTAGCCCTAGATCAAAAGGGTTTGTCGGTGGGGTGTGTG
GCGGCGGCAAATCTCGTAGTTCGTGTCCCAGCCCCTCACCTCTATTAATATAGCGCGGGT
CACAGGGGTCCACCAACCATAATGGATTGGGCACCTCCGATCAGGACACGTGGATCAGGG
GTCCGGTGGGCCGTTGGGCCAACACGGGAAGAGATCAATCTAACAAGCGGAGCTCCAACG
CAGCGCCGACGGGATGAAGCATGGATATGAAGCACAGAAGTGGTCGCAGGATCGCAGCCA
TGGTGGGATGAAGGGGGGAGGGGGAGGGCTCGATGTGCACCGTTTTATCCATGGAGCTTG
CAATACAGTGATTGGGAAAGGTAGCAGGCTAGCAGCGGCGGCTGCAACACTATTCGATGA
CGAACGGCGAGCGAGAGGATTCGCATAGAAAAAAGAAGGCTGGGAGGAAACGTGTGCGTG
AAGGTAACGCTGTAAGAGCAAGTATAATAAGATACAGTCAGCAGACTTTAAGGATTAAAA
TATTATATTTCTGCTGAGTTGGATTAGAGAGAAGAGGAGAGAGAAGGGAAGCACGTGTTC
CTAGGTGCTTTGTAAGAATGAAACGTGGGTCATATATGATAAAAGTAGTACTTTTTTATA
ACTAACTATTGTACAAGCTAGCTATAAGGTGGGCTATAAGACTGTTTATAGCCAGCAGTT
GGCTATACTATTAACCATGCTCTAAGGTGAGGAAGCGATGGGCCTAATCCAGAGAAGACA
TGCGTCAAGCAAGCGTGGCGGTTGATGGAGTGGAAAACTAGCCGATTGAATCTGATCGTT
TTCCATGGAATCCTCTTCAACTTCTAAGTAGTAGCAGTAGTACAATGCACTTCAGCTCAT
ACTATGCTGGTGTGACCTCCTCTACTCGTGTGTGTACCAGCACTTCACTAGCTTGTGCTT
CGTTTCTCAAGTGTTTGTCCGAGCTGGTGGACTTAACAGCAGCTGTAGATTATTTCTAGT
CTATAGTTGGACCAAGACGCATAGGGCAAGAAGTAATTAACATCATAACACATCAAAATA
CAAGCATGGGGTTTTCAGCCTACACGGCATTGTTTTGATCCAGTTACATATCCATCTGCA
TCCAACATACATATATCAGTGCTGAAGGATCCCCGTGGTCCTGCCGTACTCAACGAGGTC
GTCGAAGATCTCGCCTAGGTCATTGCGCTTGAACTCGAACCCTTCCCCAATGAGCTTCTG
AGACGATAAACACACTCTCGGCTTCTCATGGGACCCAGCAAATCTACAGAAAGTATGTAC
TCGCATGTTGTTAAATCCGTATTAAAATTAAAAGTAGAGGTATGCTTCGGTACAACCTCC
CTTCCTCACAAAACGTATAAAGGAGAATGTATACTCGTCTCGTATTATACACTATAGGCG
TCATACGTATACTATATATATGAGGTAGATATACATATGGCGGTCTATAGTATACAATAC
GAGGTGGATATACATTCTTCTTTATACGTTTTATGGAGGAGGGGTTGTACAGAAGCAAAA
GTGTTAAAAGTAAACATGCACTCGTGTCAACGGGCAGACGGTTAGCATACCGTTCAGGTT
TCACGTTGTACCGTGGGTACTTCTCGGCTAGGAGATGGGCGAGCTGCACGAGGGTGGTGT
TGTGGCTGCAGCAAATATACCTGCCCGCCGACGACTCATTCTCGGCTACAAACACCTCGG
CGTGACAGAGGTCATCCACGTGGCATATCGACACGGAGTCGGTGACCGACTGCAGGCCTA
TCAGGATGTCCAGCTGTGTCACATCGCCTGAAAAATGGAGAAGACACGCAGACATATACA
TATGTCACCAGTCAAATTAACACTCATCTACTCCAGTAGCAAGCATCGATCATGTTGTAT
AAACAGAGAAATGGTATGGAGGGACAGCTCTCTCACCAGACAAGAGGGAGAGGGTGACGG
GGACGCTGGTTCTGGCCTTGGAGACCGGCGCCGCGCCCAAGGTGAACACGGGCAACACGG
TGACAAGGCTGATGCCGTTGTCCTCGGCGAATTCGATCGCCGCCTTCTCCAGAAGCACCT
TGGACACCGCGTAGTCCTACGATGCAAATTACAGGTGCACAATAGCTTCAATGAACGTAA
ATGTACGGGCCAGAGAGAACGAACACACGGTTTTGTTTTATGTACCCAAGTTGGTGGCTT
GTTGGCTCTGAGGTACTCGACGTCGGACCAGGAGCCCTCGTCCAGATCCAGCACGTGGCC
GCCGCCCTGCAGCGGCCTCCTGGACACCCCGGCATCCGACGACGTCAGGATCACCCGCTT
CACCGTCCCGGCTCTCACGCACGATCTCATCACGTTGAGTGTTCCTTGCACGGCCGGCTC
GATCAGATCCCTCTGCCGTCGAACACGATGCACAGCATGTTATCCGCAAAGAGAAGAAAA
GTGGCATGATTGAGTTCGCAAAGTCTCTTTTACCGGTGCCGGTATGTACCGACATAGCAT
CCATCATTCGCATGTTTTATGATATGTGCATAAGTGAGGGTTCATCGATCCATATGTATA
ACCAGGTATAATAGAAGCTCATCACTGAGAGACGCGTTTTGGAGGCTGAGCTCCATGAAG
GTCTTTATTTAAAAAAAATCAAATTCAATTTTTTATGTTTCAGAAAAATCTAAAAAAAAT
ATGCGTGTATGTAAGGATGTAATCCACGTGTATGTAAAAATTCATGATGAAATACCTTGA
ATTGCGACCTGTACAAAAAAGAAAATTCGCGACCTGAGAGGATGAATAGTATCATGTGTT
AAACAGCCCCAGATTTGTCTTTTTCACATAGACCTCCTTTCAATGTATTTTGAACTGAAA
ATTTACACACATGTGTGTTATATCTTCATGTATATCTGTATTTTAAAAAAAAAATTGAAA
TGTAAAAATATGAATTTCGATTAAATTTAAAATTCGAATTTAGAGGCCTCACTGGTGACC
GAGCTCCAAAAGGGATTTCCGCTCACCACTCGTATTCTTAGAGCATCTCCAACAGCCGCG
CTATACAAGCGCCGCGTCGTAAAAAAGGCTGTATTTAGCGCGCGCGCGACGCGGCGGCAG
CTCCAGCGGGTGCGCAAAAAC