Map Locations of contig_62535 (3529 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_62535

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72872 1 390 bp MLOC_72872.1 Available Available None
MLOC_72873 2 558 bp AK371500 Available Available None





CDS Structure of MLOC_72872






CDS Structure of MLOC_72873






Contig Sequence (3529 bp)

>contig_62535 3529 assembly3_WGSMorex_rbca.fasta
GCGCCACCGACGGGGACCTTGCGCAGGGTGCCGCCGTGCGTCCAGTAGCGGCGGCAGGTG
CGGCAGTAGTGGCGCGGCTGCGCCGTGCTGTAGTTGTTGTAGTAGCAGAACTTGGTGTCG
CTGGAGCTGCACCGCGGGCACTCCAGCTTCTCCTGCTGGCTCTCGCCATGCTTCTTGGTC
ACCGCGCTCTGCTGGTCACCACAGTTCACCACACGCGCGCGTTAGCAGGTACGTACGAAT
GCCGCTTGCCGGAGAAGAGTCGGACAGAGCGAGCACTGAGCAGAGAGTCGACTGACCTGC
GCGAGGGGCTGCCCTTCATCAGCAGCGTCGACGGCGGAGTCGGCGGCGAAGGGGCGCTTG
GCGCCGGCGGCGGGAAGGAGCGATGCGGAAGCTGGAGCCATGGTTTGCCGTGCGGGCGGA
GCAGCGCATGCCGTGTCCGACCCGGCCGGCTTAAAAAACGTGCCGCGGGCGCGCGTGGTG
ACCACCGGCTAGCTAGTTCTAACTGAGCTACCCGTAGCTAGGCAATTAGCTAGGAGAGGA
AGAAGAGAGTGAGACGTAGCGGTCAGTCTGAGCTGGATGGGCGGCGGCGGCGGCAATCAG
ATGATGGAGCTGAGCTGACGGGAGCGGTTGGTCGTGGCCTACTAGCAGTAACCTATGCGA
GGCCGTGCGTCCAGTGGGTGTCCTATATATAGAAGCCGGCGCGGGCGCGGGGCTTGCGTC
CGAAGGCAGCTTAGCTTCCTCCACCCGCGTACGTCGCCGTCGGCGTCAGCGTCAGCGTCG
CGTTACATGCATGTATGTCTGGCACGACCGGGGACACAGACCATGCCCATGCCTGATTAG
TGGCACGAGCAGGAGCGTTCGGTTTGCTGAGGAATCGAGACGGAACGGGCCGGCGTCCAT
GGCGTGGTGGTGCAGAGGAGACCGGAGAGTTCTCGCGGTCCGTCCGTCCGTCCTCGGTGG
TGGACGGAATCTTGCAACCAGTCCGGTCCAGACATGCATGCACGCGCGCTCTCGCACTGT
CATGCTCTCGTGATCGGCAAGCGGGCATCGTCGCGTCAACATCTGGCGGCGCCGCCACTG
GGACACGGCGCAGCGAGGCGCCGGCCGGACGCATGCATGCAGTGGGTGTGGACGAGGAGC
GATTGGTGCGGGTCGGGGGTTAACGGGGACGGACTCGAGGTGGCCCTCCGGTCGTCCTGT
GCTCTGCTCGTCGCCTCACCGTGACGCGGCGCGGGGCCCGTCGGAGGTTGGCGAGCTAGG
ATCTGGGCTGAGCAAGGACATGGTCGGTGCCGCTTTTTCTACGCGCCGTAAGTGCTGTCA
CCGTCACGGACGGGTGGCCGATGCGACCCACTCGCCGGCGTCATTCCGCGCCTCTCGTCG
ACCGATCCATCGGCCTTGTCAACCAAGATTCAGGACTCAATACTCAAGTCTGTTTACCGC
CAGACCTAAAGGCCTACAAACGAATCTCTCTTGAAATTTCTTGCCATACCTAAAGTCCTA
AACGATATTCACTTTTTGATAAATACTTCCTCCGTTTTAAAAAAATAAATAAATGTCTCA
AGCTTAATACTTCCTCCGTTCCTAAATNNAAGTCTTTTTAGAGGTTCCACTAAAAAACTA
CATACGGATGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGCTTCGTATGTA
GTCCCCTAATGAAATCTTTAAAAAATATTTAGGAACGGAGGGAGTACAAAATTGTAACAC
TTTTTTCGAGATGGCGTGAGTATTGTTTCTATCAAAATTATCTAGAATGGTTTTAAAATC
CTTTTTTTTTGCGGGGTAGGATGTTTTTAAAATTCTAGACATGCCACAACGGAGAGTAAA
TAAACCAGGGCGAAAACACGAGACAATGTGTATGGCGTGCAGAGCAGATTGAGCACAAGG
GGGAGAAGCAGGTGCTACCGTGACTTCAAAACAGGGACATTGTAGGTCAAGATGGAGAAG
TTGACGACAAGAGCATGTCGAGCAAGCGAAAAGTGGCAACCGAGGGGAGAAAATTTTAAG
AGAGTTATCCATATGATCGAATTCTTCCATTCCCTTTGTACTTTGCATGAGTATATATCT
TCATACCACCATACTTTACTTTGGTTTCCTCGCGGACTGATTATCGCTGGCATAAAAATA
GCAAAACTTAAATTGCAAGGGCATGCATGTATAATCATTGATATAGATAACATACTCTTA
TCTATAGTCCCTTTGTTCTACAATGTACTACACATTGATTTTTTTTTTACCAGTTAAATT
CTATATACTTTAATCAAGTTTACACCTTCATAATGTATATATTTGGTATCGTATTTATAA
ACATGTTTTTATAAACTTTAGCAAAATTTGTAAAGTTTGACTTTCTAGAAACTATATGCA
CTATATTATAGAACGGAGGAAAGGGAATATCATCTATGTCGTTAAGAGAAGACGAAAGAC
GTACTATACGAATACGATGAACTATTCTTTTCATTCCAATTTTTTGTTGTCTTAGACTTG
TATACATCTATTTTTTGATAAACTTAAGACTAGAGTTTCGAGACGGAAGGAGTATATCTT
ACTGTTATTACCTAAGCTTGTGGAAGTTAATACTACAACATACTGTACTTTACCAGTTCT
TTTTTCCTGATCTGTGAATATGTGTACCAGGTTTGATTACAATTGTTCTAGGTTCCATTC
CTACGTGCGCGTATGTGTGTGTCAGCTGGTCTATCCGGCCGGCCCGCGTTACGAGGCAGC
TAACATGTTTGCGGTGGCGATTGATCCAGTCCAGTGTAAACGTGAGTTGAGTGTGTCGGC
AGAAGATTAGCCACGAGCAGTACCAGGAGTGCAGGACTCAATAGAGAAATTGCACTTTCG
GCAACGCACGGACGTCGACCGTTGACTGACTACACAGCCGTTGCAGTCTTCCAATTTTCA
GACGGATCTTCTTGGGTCCAGTCATCTTAAGTGAATCTGCTTGGATCTGGCCGGCGTTCT
CCTCTGACGGATCCGTCATGGATTCAACCGATCCTTATTTCCATTGTTGTATTTGTAGAC
ATGGCACTTCAATCTACGCCTATCATTGTCGGAGAGGGTTGATGTTCTGGTGCGCTGATC
GTCTCCAACCTTAGCATCATTAATTGTTGATTAACAAAAGAGCCCGTGCGTTGCAAAGGA
AAAACAAAATCCTCGTTTGCACCAAACGACTCATTCATGTTGCCACTTCTATCTTCCATC
TTCTCCTTTCAATATTATCGGGGTTTGTGGTTTAATATGGCATTGTTCTTTAATTTCACC
CCTTTTCTTTCATTTCCTCATGAGAATCTTCGCCTTTCGATCTTATCGAATTTTGTGATT
TATGCCACTGTCTTTTAATTTCGTCCTTCAAAATATCATACACTGTACATTTGACTACCT
AGGATGATCCTGCTAGGGATACACCTCGGGAGTTGAAACATACCTTCCACATATTTGATA
ATTTCAAAATTCGATAACGACTATTTGACCTCAATGAACATGTATGTCT