| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_62331
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_72770 |
1 |
1826 bp |
MLOC_72770.1 |
Available |
Available |
LOC_Os11g04170.1, FRAME:+1, EVALUE:0.0, 13111.m00364 protein CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
CDS Structure of MLOC_72770
Contig Sequence (5231 bp)
>contig_62331 5231 assembly3_WGSMorex_rbca.fasta
AGCGGTCTACAAGGGTATGTGGATCCTATCTCCCCTCTCGTAGATGATCTTCACCATGAT
AGGTCTTTTGTGTGCATATGAATTTTTTTGTTTCCCATACAACGTTCCCCAACATAGACA
TCACATGACAGAGTCGCCGACAGTGGAGAGCGTCAAGGCCTCCATCATCTACGCTTGGTA
AGCCGCCTCCTCCTCCTCCTCCTCCTCCTTGAGGCGCGCTTCCTTCTCGCTTGCACGAAG
GACGGTCGCCAGCGCATTCTGGTACGCGGCCTCCACCTCCTAGTCCTCTTCGCACACGAC
GAGGGGCGGCAGCGGTCCAGCCACCACGTGGCGCATGCCATGCCGGCACTGCTCCTCGTG
CTCCCACGCAAACTAGGCCTCCAATTCAGGAGAGTCTGCAGCGTACATGGGGTTGCGCCG
CAGCTGTGGTGTCAGCTGCTGCTAGCGGCGCCTCACCTCCTCCGCATGCGCCCGTGCCGA
CCGGGACACCGCTGGCTCTGGGATCCTCTCCGGATCCAAATGCTAGTAGTGCGGCAGCAT
GACATCGGGATAGGGGAGGGGGATGCGGTACTCCCAGTGCCAACTCGTCTGGTGCATTCG
TACGCTCATCCGCTGCCGAGGTGGACGTGAAGATGCAGGTGAGGGGAGCGCGCGGACAGG
GACGACCGGGGCCTTGCCCATGTCTTTGCGAGAGCTCGAGCCGGAGAAGAAACCCATGAT
GATGGTTAGGGTTTGTCGTCGGTGGGGGAGCACCGGGTGGCTAGATGGGACGGCTTCTCG
AAGAGGATGAGCCCCCGCCCCCTTCGGATTTAAAAAGGGCACCTAGGGTCGCTGGCGCGT
GGGCCCGCGGTGGGCGGTCGTTGTTATTAAAGATGCAGCTGGTTGTTAACCGGGCACCAC
GTGTGGACGGGCGCAGGCGTGACAGTGCGCGCGCCGCGTCCGCGGCGACGCATTTCAGCC
CCCAAATTTGGGTCTGAAATGAGTCTGCGTGGACGGAAAGTGGACGTGTTTTGGAAATTG
ATCGGCGCTTTGGACCTTCACTTTTGATCGTGGCAACCCAAAACGGACTATGGCGGACGA
TGTCAATCATACTCATTTTGGAACAAATTCCTTTCCCCCCAAATCCTACAGGAATTGAAG
TGCTTTCTATGTGAACCTTTCAAATTCATGTGGATTTGTTCCCAAAAAGAACGCAGCATG
CATTACAGTTACAGCTCTGCACTCTGTTGACATACACACCGTAGCAACGCTTCACTCTAG
GACTAGGTCTCGCCTCTTCTTCGGGTTCGATGGTTCCGCACCGCCTGTTCCTTTCCTCAT
CATCGCCACGAACTCTGAATAGTCTATCCTCCCATCCTGCATACGTCAAGAAAACAATTT
CAGTTCCTTTCGATGCATTTACCATCTGTTGTTTTTGAATGTATTTTTTCTAGATGAATA
GTTTTTCTTCCTTACATTGTCGGAATCGGCGTCAGCAATGACATCCTTGAATTCCTCGGG
GTCGTACAACTTCTGCTCTTGTAAGGCTTGCTCCAGCTCTTCTTTTGTGATGTACCTGCA
AGAGGTATATGAGTCTCCAAAAGTCCTGAATCCCCTACCTCTGTTTCTTTGTATTTCAGG
AAATACTACCTCTGTTTCTAAACATAAGGTGTTTTGGCAGTTTAAATTGAACTTTCAAGA
CGTCTTACATTTAGGAACAGAGGTTGTACTAATTATCAATTTTTGTTGGTGCTCAACTTA
CCCACTGTTGTCCTTGTCGAAGTATTGGAATGCAGTGTAGAGATGCTCTTCCCTGTCCAT
TCTGTTCATGTGCATTGTCGCGGTGACAAACTCCTCGTAGTCGATCAATCCATTGCCATC
GGCATCGGCCTGAAAATCGAAGCAGAAAATAGTTTCTGTTCATGTCAAATATATGCAACA
CCACGTAGCTGATTGTGTCATCTGAATTAAGACTCACTGCTTCCATCAGTTGCTGAATTT
CATGGTCTGAAAGCTTGGTGCCCTGCTTGGCCAGCCCAGTCTTGAGCTCTTCCAGGGTGA
TGGTGCCGCTGTTGTCCTTGTCGATGCTCTTGAACATCTCCTTGAGACCCTTGATCTCCT
CCTCTGACAGGCACCCAGCAATGACCTACAGAAAGTTCGGCGCAAAGTTATCAAAGATTA
ATCACCTGAAGAACTGTTGTTCATGTCAGTCCGTGTGCCTACTCTCAGCGCGGCTTTCTT
GAACTGGTTCATGGCCACGAATTGCTTCATCCTGTCTAGAACAACGTTGTCGAGCGGCGT
GTCGGGGGCTTCTCCGTCTTCCTTGATCCATGGGTGATCTGAAAAGGCTCAAGTTAGTTT
GGGTGATCGATCGTCATGTAGAAGAAAGAAGTGTGCACGAAGCAAGCATTTGACAGGAGA
AGAAAACGCATGCAGGAGTGGCTTACTGAGGACTTGGATGGCTGTAAGCCTCTCCTTGGG
GTTGATATGGAGCATCTTTCTGACAAGATCCTTGGCTCCGGCGGAGATGTTTGGCCACGG
GTCGCTGGCGAAGTCGACCTCACCGCGCAGAATGGCGGTGAAGATGGCGTTCTCATTCTC
CGCCCAGAAGGGAGGGACGCCGGAGAGGAAGATGTAGAGCATGACGCCTATGCTCCAGAC
GTCGGCCTCGTGCCCGTACTTTCGCTTGAGCACCTCCGGAGCGATGTAGTAGGCGCTGCC
GACGATGTCCTTGAACACCTCGCCTTCCTTGAAGAAGACGGAGAGGCCGAAGTCGGTGGC
CTTGATGGGCGACGACTCGTCCCTGTTGAGCATCAGGAAGTTCTCCGGCTTGAGGTCCCG
GTGCATCACCCCCATGGAGTGGAAGGTGTGCACGGTCCCGACCACGGAGCGGAGCAGCGA
GGCGGCGGCGCGCTCCGTGTAGTGCCCCTTTGCGATGATCCGGTCGAAGAGCTCCCCGCC
GGCGCACAGCTCCATGACGAGGTGCACGTTGTGCTTGTCCTCGTAGGCGCCGCGGAGGTC
CACGATGTTGGGCTGGCCGGAGAGATGGTGCATGATCTCCACCTCGCGGCGGACGTCCTC
CACGTCCTCCGCGCCGGACAGCTTCCGCTTCGCGATCGTCTTGCACGCCAGCTTCTCCCC
CGTCTCCGTGTGGGTGCACAGGTAGGTCACGCCGAACTGGCCGCGCCCGAGCTCCTCGCC
GATGGTGTACGTCGCGCGCACGTCCTCTATGGGCCTCCCGAGCACCTCGCCGACGGGGCC
CGGCGGCTTGGCATTGGGATCCGCCTTGGTTGCCGGAGAGGCGGGCTCGGCCTCGGCGGC
GCCAGGACCAGGAGCCAGGCCATCGTTGGTTGGTGCGTTGTCCCCGCGCGGCGTCTTTGG
GGGCGCCGGCGGCTCTGCCTCGGCCGCCGCGTCGGCAGCGGCAGCCTGCCCGGCTCCGTT
TGTGCAGCATTGGCCCATGGCTGCGGGGAATGCGCGCTGGCCGCTCCGAGGGAGGAGAGG
CAGGCACACACATGCATGAAGAGCACACACCTACACACATGCACAAACCAAAGTTCGGAG
ATGGGTTTCGTTATCTTTGCCACACAAAAAATGGTTTTGAGCTTGGAAGGTTGGGAGTGA
ATGGCGGGAAGGAGGAGGATTATTTATTATGCTGGCGTCACAACCTGAACCTGAAGCCTC
TGTTTTCTAGCATTTCTGACAATACCGCGTTGTTATGATCCTACGGCTCACATGGCTCCT
CACCTGATCTCGTAGCTGAGCCGTCAGATACCTTTTACCGTTATACAATAGTTATTCCCG
TTACTTACCTTCACTGCTCTAGCGGGTAATGAGCTACCTCAGGCTGCAGGTCTTTTTTTT
TTTTTTTAGACGGAGCAAAAGATTTGCCATTTCATTAATTAAGAATAAGATTTTCATAGT
CTGAAGACCAAACCACAAAGCGATGGGGATAAAACAATCACTCGCGAGGCAAAATTAATC
TAATCCCTTGGCGCGTGCATATATCCATAGCCTTGTCTCTTCGACAATTTTGCCCATAAT
GATTGTCGAAGCCGCAGAAACATTCCGGAAGATCTTGAAATTCCTTTATTTTCAAAGCTC
CGAGGAAACACTCATGAGGATGGATGCCACACCTTTTCTATTTGGCGAGTGCAGGAGGGC
CGAATTGCCCCACCAGTCTTCCACGCTGACCATGTTTGCCCAATCTGTCGTTATGATCTT
TGGCAGTCCAAGCTTTGGTTTGACCGAGTTTCACACTGCAAGCGAAAAGCGGCACAGAAA
GAGAAGACGAGCCACCGATTCCTCAACCTGGCTGCAAAGGGGGCACAGTCCGCAATTTGA
CCACCCCTTACGCTGGAGCCTATCCGTTGTCCAAACCCTATTATGAACGATTAACCAAGC
AAAGAACTTATAATTTGGGGTGGCCCAAACCTTCCAAATTTTCTTAAGGAGCGGTGTGAT
GGTGCACCCCCTCAAACTACATCTTGTACGTAGAGGACGTCGAGAAACTACCATTGTCTA
TGAACTTTCAGGTGATCATATCTTGCGTGTCATGGTCAAGAGTGACCCCTTGTAGCTTCT
CCCAAAAGGTGACGAACTCCTGGATGTGACTCACAGAAATGCCCTCAGTAAACTTAATCT
GAGAAACACAAATGTTATCAGATAGAGGCTTAGCAACCGTGCAGTCCTTCCTCTTGGTAA
TCTTAAAGATTCCAGACGCAATATCCATAGGCCGCAACCCCTCGAGCCAAGATGATTTCC
GGAAGCATGCCTTGCTGCCGCTGCCAACCTTCACCGTCGTGGCCGCTATAAAGAAGTTTC
GGTCGGCAACATAATAGGGGTGCCAAGCCCCAGCCATGGTATTGCCGACGAGGCCCACTC
GAACCAGAGCCATCTTAGGCGGAGCGTGGTGGCGAACTTGAACATGTTTGAATTATTTAG
ATTGCTTATTACATGTGTCACGTGGTCAGGTTGCAGGTGAAAGTGGGGTTTACTGGGACT
AGCAAGCCAATCTATACCTACTAATAAAGCATATATTGCTTCTGTGGTGCGTCATTAAAT
TTGCCCCTAAAGTTCACCAAAATTACCCACCAATGCCACCCGTAAATTACAATACCGGTT
TGTTTTTTTCTAAAGTCACCAGCGTCCCGCATTTTTATATAGGATGTTATCCCGTCAATA
TCCATTACTTCGCCAGTAGCCTACTGGCGCTCCCAATAACTCAACCCGAGTTCAATCCCC
ACTGCTCCCCC
