Contig Data
morexGenes
Links



Map Locations of contig_62287 (4092 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_62287

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72747 1 313 bp MLOC_72747.1 Available Available None
MLOC_72746 6 2178 bp MLOC_72746.1 Available Available LOC_Os01g46850.1, FRAME:+1, EVALUE:6e-18, 13101.m04819 protein expressed protein





CDS Structure of MLOC_72747






CDS Structure of MLOC_72746






Contig Sequence (4092 bp)

>contig_62287 4092 assembly3_WGSMorex_rbca.fasta
CATGGTCATTTCTTCAACATTTAGTGAACCCGTTTAGTTATTTTACATACGATTAACATA
TACTTCATTGAAGAGCTTGTATGATGTGCTGTTGGCTGCTGACGTGGACATTTATACCAA
CGATTGAACATACAGACTGTTGGAGATGCTCTAAATAAGTACTATTTTATTGATAGAAGG
CCCACCATCCTTTCTCACAAAGTGTCCAGGAGCACGTGTTACAGCCGACTATTAGTTTGT
AGCCCGCTTCTCTTCTCTCTCCTCTTCTCTCTCTTCCAACTCATCATAAATATATTATTT
TAAGTCTTACAGCCCGCCTACATTATTCTAATGTACTTGCTCTAAGTTACTTGCACTAGG
GCTGTGGACTCTTTTGCATTTGTCGACGTGTCGTCTGTCTGCTTGCTCAGGTCCAACTTG
CATGTTTTACTCTAATCTTTTTCGCGGGAAAGCAAGTCAGTTGGCTCGGGAGCCGTATTT
TTTGCAGTTCGATACTTTCTGGTGGTGATGTGAGGATCTGTTGGTGGTATTAGTTACATA
CAGCCAGGTGAAAGCGATAGGCAGAGAGAGAGAGAGGATCACTATGCCTGAATCTATCTA
AGCCAACGAGGATCAAGGCTGGCCGCTCCTATTTACACACGAGCTCGCTGCCTATTTCTG
ATCAAGGCTGTATAGATCTGGGGTCTCGCCGAAATTCATGCGAGCACAAAAGAAACGCCA
GCCTCTTCTCTTGTGCCTCCCCTTCCTCTCCTGATCTCCAGAGCGAGAGGGAGGGGATCT
AGATAGATAGGAACTCCAACCCCGGCCGTTTCGGTCATCCAGAGACATGGCGTTATTCTC
CAGAGCGTCGTCCCTTGTTGCCATGGCCATCGTCGTCGTGCTGGCCTCCGTGGCCACCGC
CCAGGGCCCTGCCCCGGCACCCACCGCCAGCGATGGTTACTACTGTTTTCTACATTCTTC
TCCATTTCCTCTCCTCGTGCGTTTTGCAATCACTGCGTTGGTGATGCAATGCTTAATGAT
GATTTCCTTGGTTTTTGGCAGGAACGAGCGTGGACCAAGGGATCGCGTACGTGCTCATGT
TCGTGGCGCTTGCCCTCACCTACCTCATCCACCCGCTGGACGCCTCCTCCGCCTACAGCC
TCCTCTGAACGCAACTCCGGCCCCGCCATGTCCATGCGGTGTAATGAGCGTTGCATGTTC
GATCAATTCATCCAGTCTAATCGCTCGCTTCGGAAACCAGGATTAATTGTGTGGTCTATG
TAGTTTCTTCTTTCTAGCTTTTTCAGTTGGAGATTTGTGAGATGCCAATTCCTTAGCTTG
TACGTAGTGATGTAATGCAGTTGTTCTCAGTCCGGAAATATCCCCGCACAAGAGAAAACA
CACACTAGTGCATAGACGCATGCTTGGCATGCATGGTTATTTCTTGCTCGCATGCCCAGC
GCCCGCGCCGGCAGCGTTGCCTGTGCTCGCACCTGCACTGCCCTCGGCCGGCAGGGTGAA
GGTGGTGCTGCTGGGCCCGAAGTTTGCCAAGAAGAACGTGAGCGGGTACAGGACGGCGAA
GAGGATGTGGGTGTGGTTCTTGAGGTATTCGTGTTTGATGCTCGTCATCAGGAAGAGGGA
CATCATGAATGTTCAATCGATGAATTGATAGGCATACAGATTACACTTATATAAAGCAAA
TACTGTTTCTGTCATTCGTCGTGGCTTTTTTTTGCAAAAAAGCCTCTGTCGTTTCAGGTA
ATTAACCCGTAGTCCTTATATCAAGTAAATGAAACGGTACAGACGAGATAAAAAAAAAAA
AACAGCCGCACGCACGCACGACCCTGTCTCCCGATCCAATCTTGACCTCCAGCGCACCGC
CACCTCCTGCCCCGCCTGACCCCGGCGACGGTCGATCCGGTGTTGCGCCGACCGGCGATT
GGGAAGACCAAGACGGTGTCCCTGCTGCGGCAGCTCTATGACGCCGGCCACCGTTGCTTC
GGCGAGAACTACGTCCAGGAGTTCGTCACCAAGGCGCCGCAGGTGAGGCCACCTCCTCCG
GATTTTACTGGATTGGATTGGATTGGGTGGTTGGATCCTCGTCTGTTTGCTGGTTGCAGA
GCAACAAGGTGAAATCGCTACTAGGTATGGTCAGTGTCTCACAATCTTTTCCCCTTCGAT
TCCCTGGTGACGGCCACACGAGAGATCGAGACGGCCGGCGGACGCAGGTAGGGGTGGGCT
CGGGCGGGAGGCGCGGTCGGCTGGACGGCGGAGTGGTAGCCACTCACGAGAGGAGACAGA
AAGTGCTCCTTGCCGTGGCGGCGCCCCCATGTGCGTCGACTGCGGGTTCCTTGGCGCCGG
GGCTCTCAGGCCCAGGGGAGGACGGCCGGCCGGGCGCAAACCTCGAACGCAAGCCAGCCC
CGCTTCTTTCATGGCGGCGAGCTGCCGGCCATCCGATTCAGGCGTCCTCTGGAGAAGACC
GCGACCACTAATGCAATAAAAGAGATAAGGAACCTTCAATCTCTAAGTTGCTGTTGACAC
AGGTGAGAGAATTACATGCTTTTCTCCTGCTAAAGAGGAGACTTACGTGGTTTTTAATTT
CAGAAGATTAGTTTTAGTCTCTCAATTGGTGATGGATGTGGTCTGCGGCTCCTACAGTAT
CTCAAGGTTTACTGGATTGTACATAGAAAGTCATTTTGCTCTAATTTGGAGCATCAGCTA
CAGGCTCATCCAAGGAAAGGAAGATATGATGACAAGGGCTGATTGTTGTTTAATCTCAGC
CAAACACTTGATGAGTTACATTATGGGAGGATCAGATTCATTGGCTAGCTGCACTAGCAT
GGCCCCAATGGCGGTGCTGGAGGTACCGCTGCTTGCGCCTCTGGCCATGCCAGCCTGATG
CTGTACATGCTGGTCAACGTGATGTTGTCAGCCACCCAGATTTTGTGCAGTTAGCTCGGC
AACTTCTAGTGCCCCGCCGCCTTTCTCAACAGCCACGGCACCGAGTGTTTCATCTACGCC
TGATGCACTTCCATAGTATATAATATTAGATATACACAATCATAGATGCATATATGATCT
TCCACCTTGGCTCCTGTACTGATAAGATTTGTGTTGATACATGATTCTCAACAAAGTGTA
ATACCAATTTCTTTCAGGAAAGTGTAGTACCAGTTGGTGTGATATCATGCTTCAGTTTAC
ATCATGTAGAGCAATCTTTCCTACTATTTTGTTGAGTTATTATAACAAATAAAGTTGGTG
TGATATCATGCTTCAGTTTACATCAAGAGAGCGGATGTGTTGATTCAGATATTTTAGAAC
TCTGCATTTTATTATACTCCCTCTGTTTTTAAATATAAGTCTTTTAAAAAATTTCATTAG
AGGGCTACATACAAAGCAAAATGAATGAATCTATATTCTAAAATATGCCTATATACATCC
GTATGTAGTCCTTTTAGTGAAACATCTTAAAAGACTTATATTTAGGAACGGAGGGAGTAT
AAAACTATTTCTGTTGTTTTTCAGCTTAATGGAAAAGTTCTTTGAAGCTTTGAGTAGCAT
CCAACTAGAGGAATAACATGGTACTTGGTCAGGTTTTAGAATGTGCTCCAAGTTCTCAAT
AGTTGTGAAAGCTTTGCTATATGTATGTGATTGAAGAAATTATATAGTTGGTGTCTTGGT
GAAAATTCTTATTTCTGGTTAATAAAATCATGTTATTGTTATTTGTTAAGTGTTCCAGCA
TGCCTACTATGATCCTGTGCAACTTTGTGTATGGCTTGTTGTCAAAAAATTAAACTTAAT
ATGTGCTTGATTAATTCAGTCAAGCCATTATTATTTAGTTATCTAATTAATGTACAAAGG
TGTAATGTCTAAGAGCAGCAGAGCCCGAGTTATGTGATACGTCTCAAATGTATCTANNNN
NNNNNNTGGTTTCATGTTGTTATTTTGTCATCTTTGAATGTTTTATGTACCTTTTATATC
TTTTTTGGACCAACTTGTTAATTCGGTGCCAAGTGTCAGTTCCTGTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACGGAATAAAATCCCCGAAAGGA
TTTTTTCCCGAA