morexGenes - Barley RNA-seq Database

Contig contig_62158

Source Contig contig_62158

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_62158 (2136 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location

Predicted Genes from contig_62158

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_72696	1	660 bp	AK357630	Available	Available	None

CDS Structure of MLOC_72696

Contig Sequence (2136 bp)

>contig_62158 2136 assembly3_WGSMorex_rbca.fasta
AAAAAAGAAAAAAAAAATAAAAAAAAAAGAAGAACACAAAACACGGGAGAAACAGGGGAA
AACAAAAAATAAAAAAAAAAAAAAAAAAATTTTAATAATGTGTCATTCTCTGTTTTTTTT
TTTGGGGGGGGGGGGGGGTGTATTTCACTTAACAGAAAAGAATCTTGCCGACAGGCCCCC
CAGATGAAAATTTGAACATAAATATCGGTCACGCCAATATTTTAACTTCGGAAGTTCGGA
TATTAGATGACATGCTAGGAAGGAAAAATAACTGCAGATGTACAAAAAATGGTTGGGAAG
TTGATACAAGATATACCTCCTCTGGTGCAACACCTGCATCTCTGAGACTCATTGTGATAC
AAGATGATACACCCAGTCCATCTGCTCTAGGATCAGTCATATGGTAAGCATCACAGTTGA
CCGCACCTCCCAAGTATTCAGCTATTATCGGTGCATCGCGCTTCATTGCGTGCTCCAGGC
TCTCCATAACCTATTATTGAACAAGAGTTTCACCGTCTAAGCATTACATGTCGCTAATAG
CAATAGGATCTAACTGATGACTGAAGTTCATGGTGTCAAACTGAGAATAAATATAACAAC
CTGAAGCAAACAACAAACACCAAAGAAGGAATGTAGATGGCTAACATGATTCTAAAGTAC
ATAAAAGTATTTAAAAACATGATATATTTTTTGTTAATCGACCATACCAGTACACCGGCA
CCTTCACCCATAACAAAGCCATCTCGCTCTTTATCCCATGGCCTACATGCAGTTATTGGG
TCATCATTCCTTTGTGATAGTGCTCTACACGCTACAAAACCTCCAAGGCCAATTGGAATG
ATGGCAGCTTCAGTTCCACCAGCGACGATGATATCAGCTTCACCACGACGAATATGGTTT
GCGGCAGCATAAAAGCAGTAGTTGGAGGTTGCACACGCAGTTGAAATTGAGTAGTTGGGG
CCCATGAAACCAACATCTATGGCAAGCAAGGCTGAACCCATATTAGTTATAGCATATGGG
ATAAAGAAAGGTGAAATTTTTCTGTATCCCTTCTCAATAAGGTTCTGAACACCATCGGAG
AATACTGAAAGGCCACCCATGCCAGTCCCCACAAGAACACCAGCCCGCCCCACATCAAGC
TGTTAATAATTAAGTCATTAGCAAAAGAGACATTTGAAAAGACGAGAAAAAAATGAACCA
ATAGAAACCTAGAGAACAAATAGAATTTATGGCAGTATGGAAATGATGGTAGACACCTAT
TGACAGCCTATCGGGCAGAAGAAGCAACCAACTGCTTAAGGGACCATCAAATAAATTCAC
GATTCACATCTATTTTTATGTATGAACTGTTGTTGCAACCAACAGTTGATTATGATTACA
TACAAGTGATATTTACAAACATGCCTCAGACGGAGATTATTGAAGTTGAACTCACACAAG
TTCACAGGTATTTTGGAATGCAGTGTAGTGATTTATGAGCTTATACACAAAGCAAAGCAG
GTTTACATGATACAAAACTGCGAACCATATTTTACATCAAGAAACACAAATTTATCTGTC
TCTTTTTCATTCATAAAAAGTACACATGAGGCCATCTCAGAAACAGTAAGATAAAACGTG
TGTTTTCTTCAGCAAATATCAAGCTGCAAATATATATAGCTATTTCTCACAAACCCATAT
GGTGTAAAACTGTCCAAAAAGAATCCATATCTTTTCTCAAACTAAATCTAGTTAGACCTG
TTTTCCTGTTGAAAACTTATGATATTGTCATTGTTTGAGCATTTTGATTTCAGTATACAA
TTTTTTTGAGGAACAATACTCAAGTATTTTGAAAACTGCTCACTGGTTTTTCAGTCCATG
GATACGTCCTAACTGATTCAGACAGAAGAAAAATCATACAGAAATACACAGTTCCTACTG
ATTTATAGTCAGACAGTCACACACATGTAACACAATCACAACCTACATTGTTCATAAATC
AGAGCTTGTCCTGAAGTAAAATCTACACTCGTATGTTGCAGGGCTCTCAGGGAGGAAAAA
ATTGATGCCAAATACTCAAGAGTCTACTATTTCTGCAATGTCCGCACAAAACAGAGAACT
CAGTTCACTCGGAGGCAAGGGCACGCCCCGCTCTCC