morexGenes - Barley RNA-seq Database

Contig contig_62147
Source Contig contig_62147
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_62147 (9960 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_62147

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_72691	2	1112 bp	MLOC_72691.1	Available	Available	LOC_Os07g36080.1, FRAME:+2, EVALUE:2e-66, 13107.m03695 protein oxygen evolving enhancer protein 3 domain containing protein, expressed
MLOC_72693	2	1288 bp	AK363194	Available	Available	None
MLOC_72692	1	1725 bp	MLOC_72692.1	Available	Available	None
CDS Structure of MLOC_72691

CDS Structure of MLOC_72693

CDS Structure of MLOC_72692

Contig Sequence (9960 bp)

>contig_62147 9960 assembly3_WGSMorex_rbca.fasta
CCCTTAGTTTCCTTATGGACTCCACTGCCACGGAAGGGTAGGACAAAAGANNNNNNNNNN
NNNCTTTTCCGTAAGCACGTATGACTATTTACNNNNNNNNNNNNNNNNNNNNNNNNNTGA
ACGGGAGCTAGTTATGTGTCGCCCTATGTTGTAACTGCTATATGATGAATATTATCCAAC
TATATCATCGATCCAGTGCCTACGATTTTTCTACATATCATGCTTGCTAAGTTACTATTG
TTGCTACTGCTGTTACAACTAATAATTGTCACCGTTACTGCTATTATTGTTACCACTGCT
ATCAAAACTATCATATGACCGTGCTACTGGTCATTGTGTTGCAGATACTAAATCTTCAAG
TGTGGTTGAATTGACAACTCAGCCGCTAATACCTACAAATATTCTTTGGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTGGATACTCTACCCTCGAAAACTATCTCTACATGCATATC
TTGCAAATCAAATCATGNNNNNNATTTTCTCACGAAGTCTCTACCAACTTTTACATTCGA
GAAATATGTTCATGGAACTGGTATGTGACGGCTTCGAAATTTGCAAGAATCAGGGGGAGT
ATCTTCTTGAATTATTCTTCTTCGGTGCGTCATATTATACTCTTTTTTTCTTCACGAGTT
TACTATACATGTTATCATAAAGGTTTTTAATGAGGTAATATCAACACAAGATCATATGTC
TTACTTTCTGTTTTCCCCCGCCGGGTTTTTTTGGAAAGTATATACAACATATTTATTGTC
CTCTCTATGGTTCTCACATATTGATTTAAGGGGGACGATAACTATTATATGTTGCAGCAT
TTTCTCCTTATTTTTCTCACTCGACTTGAAGGAGTTTTGGCAACATATAAAATATTATAC
TCCTCATATTTTCCCACGGGGTTTTGGAGGAGCTTTTAATATGATAATGTCGATAAGGAT
AGCGTAGATTAGGGGGAGTGTTGAGATTTACTTAACCCATGTGTTCATTAAGGAGAATCT
CCACTATCCTAACTGCCATGTATGAGGGACATGACTGTTCGCTCGTGTCTCTTTGGACCA
TCGCGTGTGTTGGATGCATCCTCTCGGGGCTATATATACTTGTACTCATTCATCAATAAA
GATAACGATTCACTTTACATCTCTATATCTTGTCTCTCGTTCTACTTCAAACAGTATCCA
ACAGCTCTTGCATCATACTGAGACGATGCCAATATAGCAGCCCTCAAAATAAAAAATACA
ACGAGCAGTGTTCAAAATCAAAAATACAACGGTAAATATGGTCCAAGCACACGCAGTATG
AGTAGTATAAATCAGAAATAGCAAAATGAAAACATTTCTAAAATTTTAGGTTAACATACA
TGATCGCATGTTCTACTTATACATGACGTTTCATGTAGAAATGTCAAGTATTCTTGATAA
ACAAAAATTGGACCTTCAAATTGCTTCAAACATGTTTTCTATAGCGTCGGTTTTGTGTTT
TTTGTCCAAAATGACATAATTCTCATTTCTTCGTGAAACCTCACACGAGAGTAGAACACT
AGATCATGTATGTTACAAATAAATTTTAGAATTGTTTAAACTTTTTGCCATTTTTCAGTT
TTATTATTCATAGGGGCACGCGTGGATCCATGCTCCAAAAATTCGTGCTCTTGCTAGCCA
CCGCTAGTCTGCTCTACTTGCAGTTGTGTGACTCCTCACCGTGTCATGGACATTCCTAGT
CCAACATTATACCCAACTTTTCATAAAATTTTCTCTCAAAAAAACTTCCCATAAAAGTTT
TTCTTGATGTATTGCATATTCATCCACTTCTTCCTGCCACCATCGATTGGCTTGAAAAAT
CTCCTACCTTACTGTGCCTCTGCTAGGCCCCAACTTCACGACCGCATGGACAAATGAGGT
CAGAGTTGAATCCATTGCCCATAAGAGCATCTACATCCGAACTGAACAAATCCGTTCTTT
ACATGTGTGCGGACGCGTACGTGGACACATCTTGACGGTCCTTCATATTTTTGCTCCTTG
CATTCACATATCTCATAACTTTTAAATCCATGCAAAACCATGCACGTCGATCACATAAAC
TAATGTCACACGTAAAAACAAATGATGGTACCGAACATAAATAGCGTTTAATTTATTTCA
AAGTGCACGATCAATCATCTCCTCTTTGATTTTCATTACGGGACCATATATGCTCCACCA
GATCATTGAATAGTTACGCGTGCACGTGATGATCTCGAAGATTCTGATGCATGTGCACAA
AGTTCATAAGCTGAACTGCATCTTGATCTTTCGGGGTTTCAACTTGTTATTCAGGTGTTT
CAAAATCATTGCTTTGAGCTACACCATGGCCCTCATCCTCGACAATCATATTATGCAAAG
TAACACAATATGTCATTAGCTGCCACAAAGTTTCCGATTCCCACATCATTGCAGCCCCAC
AGACAATTTCCTAACGTGCTTGCAGCACTTCGAATGCCCTCTTCACATCCTTCCTAGCTG
CTTCCTGCATTGTTGCGAAGTGCTTTTGTTTGTTGCCATGTGGTTTGGATATGATCTTCA
CAAATGCAGCTCACTGAAGATATATGCCATCGGCAAGATAGTATCTCGTGTTGTAGTTTC
GAACGTTAACGGTGTAGTTGCACGGAGGTGATTTCCCGTTGCAAAGCCTCCTGAACACTG
GAGACCGTTGAAGCATGATGATGTCCTTGTGAGAACCTGATATTCCAAAGAAAGCATGTC
AAATCCGTAAGTCATGTGATGTCACCGCTTCTAGTATGATGGTGGCCTCTTTGATGTGAC
CTTGATACATTCTTCTCAAACCTTTGAGGCAGTTCTTCCACTGCCAATGCATGCAATCAA
TTGATCTGAGCATTCCTGGAAATCATGTGGCCTCTCTAATAGCCAGCAACGTCTCTGTGT
CCTGCACATTTGGTTCTCTCAGATACTCTGCTCCAAACACCTCGACCACAACACGGGCAA
ACTTGACAGTAGTCTTAAGGCATGTGCTCTCCCCCATCCTGACCATCTCACCAACATTAT
GTGCCGCAGTGCCAAGTGCAAGAATTCTCACAGCAGTCGTGCACTTCTGTTTGGTAGAAA
AAGAGAATTTACCGCAGCAATCCCTTGTCAGCTTGATGTAGTAGTCGTGTGCCTCCATTG
CCTCCACAATGCGCAAAAACAAATGGTTTTGGCATGTGAATACGACGACGAAGCCATGGA
TCATACGGGAAAGTTGGGTTCACAATAAAGTAATCCTTCTACAGTAGCTTTGCTCCGGGT
ATCCTATCCCGATCACTCTTCTCCCTTTGATTGAGCCCTTTAAATTGAGAATATGCTCCA
CTTGTCGGTCTATTTCCTCTTGCATGGTCATGAGCATGATCATGTCCACTTCTTCGTCCG
AATCAGATGAATCGAAAAACTCATCTTGAATCAGTTGATCAAGCTCCGTCTGTCCATACT
CCTCGTCGGACGAAGCATCGAAATCCATCGTCCCCCCTACAAAAATTGACCAAAAAACCT
GTCCAGACATTGTGTCGAACACATCCAACACAAGGCAGAGCCAGAGAGTTGCCGGACGTA
CCGCGGTGTCTTCCGGGTCGGCGACGACGTCCTCCGCGGCGAGGACGGGACAAAAGACTC
CTCTGACAGAGGTGGCGGGGCAGAGGCTACGAACGTCAGCGGCGGCGAAGCTGTGAGACG
GACAACGCGAGGAGGAAGAAGAGAGGAAAATAGCAAATGGATCCGACTGTTCCGCGGGGT
GGATTTGGTGCAATTTGCGGTTGGGTCAGGAGGTCAGGTCCGACGTGGCGGGTGTGCCTG
GGCGCGCCCCGGGCTCCCCCCATATCCGCACATTTGGGCTGGATATGAGGGGTGTCGGTC
AACCCGGCATTTGAGGGGTCCGATTGGGTCGTGTTTTTGTGATCGCTTAGTGACCAGACG
GGCTGTCCGGGCGTTTGAGACGGGTATAAGGGGTCCGACTATAGATGCTCTAAGGACTCT
AAGCTTCCCCATAGGATGTCGACGATTGACAAAAATATCAATGACATTGACGGAGGTGTT
GGCACCAATCGTAGGAAGTCGGGTGAAGAAGATCTCTCTAGGTCACATTGTAATTGATTA
AATCGACCCATACATATATTAGATTGATGCAAATATGCAAAATAGAACGTCGGCATGACT
TGTGTTGTGGTAAATTTACTTTCATAGTCTTTTTCATGAGAAAGCAACAACAAAAAATAT
AGGGTAAATATGTTTAAAACAACTCTTTTTTTTTTTGTCTAATGTCTATTGACCTAAAGC
ATTATAGCTCAATTTTCAAATATGAAGTTGCTTACCACACATACCATGTGGTCTGTTAAA
AACAACTCCTTTTTTTGCCGGTGTATGTTAAAAATATAGCAATGATTAATGCAGTGCCTA
TGAAGTGAAATCTCACATGCTATCCTGGTAAAGTAATCGGCCACGGTGTTTTCCGGGAAA
AGAAATTATCCAAATATAACAAAGTGACAAAACAAGGAAATCTTACTGGCCAACTGAAGC
CCAAGCAGAGTGGACACATTCCTGGCACTGATTGGCCAGCGCGCAATCCAAATGGAGGTC
AGGCGATGCAGCATACCACAAGCCCGTGCCACACGGCGCGCCCGCATTGGCCTTGAACTT
ATCCAGTCAGATAAGGTTTCCCGCCGCAACGGACAGCAACACCTTACACGTCCTCCTCAT
ATATTTTTGGCAGTCCATCGAGAGATCGCTAGCTTCTCAAGAGATAAGAGAGTGCAAGGG
AAGAGAGAAGCAAAGCTTGAGATGGCGCAAACTATGGCGTCCATGACCGGCCTGTCACAG
GGCGTGCGTCTCCCAGGCCCGGCCGGCAGGCGCGCCAGCAGGTTCACCGTGAGGGCGTCG
TCGGCGGAGGCCGAAGCCGCCGGCCGCCGCGCGGTCCTTGGCCTCATGGCCAGCGGAGTC
GTCGGCAGCGCGTTCGCTCAGGTGGTGCACGCCGGCACCGTCGCGGCCATCAAGGTTGGC
CCGCCGCCTCCGCTCTCCGGTGGACTCCGTGAGTGCCTCCAGCTGCTCGTTCTATACTCG
CTTTATAGTAGACAGAAGACTATATAATGATGATTTTACGCCTGATCTGATGGATGATTT
GGGTGTGTGTGTGTCAGCCGGCACGGACAACTCGGACGAGGCAAGGGACTTCGACCTGCC
CCTGAAGAACCGGTTCTACCTGCAGCCGCTGCCACCGGCGCAGGCGGCGGTCCGGGCCAA
GGAGTCGGCCCAGGACATCCTCAACCTCAAGCCGCTCATCGACAAGAAGCAATGGCCGTA
CGTCATGAACGACCTCCGCCTCAGGGCCTCCTACCTGCGCTACGACCTCAAGACCGTCAT
CTCCTCCAAGACCACCAAGGAGGAGAAGAAGGACCTCAAGGACCTCACCGGCAAGCTCTT
CGCCACCCTCGACGGGGTAACAAACCATCATCTCGCAGTTTCAAACCTGAACATTTTCGC
AAGAAGAATTGCAGGACTAACAGGTGTGAGCTTCTCCGTTTTTTCTTTCTTGCAGCTTGA
CCACGCAGCCAAGATCAAGAGCCCCACCGAGGCCGAGAAGTACTACGGCGAGACCAAGAC
TGTTCTCGGCGATGTCCTCGCCAAGCTAGGCTAGATGGATCCACATAATGGCCGTGTTGC
TTTCAGGCCTTTTATGTTTTGTTCATATTTGGAAGCCGGCAATGTAACTTCCCTGTTGAT
AATATGTCAACAAGCACTTAAGTATGATTCTATCTTGAGTCTTCCACAGGTTAAATTACA
AGCACATGAAGAGTAAATAAACATTAAGGCAAACTCCGCACAGATCCGATGTAGTAACAA
AAAAACTTAACAGTTAGAGCCCAACAGCCAGGAGTACACAGTTTAGTCCAACCCAATAAT
TCGTCCAAATCTTCTTTTACTTCTTATTTATTAATTCCTACTCGGTGCTACATAAACACC
GTGCCATTTTTTACTTTTTGTTGAGCAAAAGGGACTTCCCCATGCTTCATTAAGAAAACC
ATATAGAAGTTCATACAAGCACCGGCCAAACCTAGCAGACCAGACCATCAGCCTAGTCAT
CTGGGACGGTATCCCAATTCCCAAACTGCTAAATCAACGGGAACAGCAAAGACCAGCTAA
ACATACCGCCAGGCTTACATGTAAAACAACATCTCCAAAAGAGGGCTGCAGGATCCAAAC
CAGCGACAGCAAACGCCATGCCAAGTAGTATTTGAGATGTAACAGAAATCAGCTAGTAAA
TGCTACAACTTCAGCTGATAAGCGTTTAGCCTGTCAGGCATAGATTATTTCGACATTTCA
GCTGAATGGGATAGAAAGACTTGAGAAGAAAACACCTCAATCCTGACACTTAAGAATTCA
GTGCTTGTACAAAACTTCCACGAAATTAACAACCGATCACAACACCGAGATGTGCTCCGG
GTAGATGGTAGACTTGACAGTTAGGCCTAAGATACACTGCTGTTCCAAGAAAAAAGGGGC
CATTGGCTTGCAAGATAGTCTCTCCCCTGTTTATATGAAATGAAAACCTTCCATTGTTTT
GTCAAGGACATCAATGTTTCTCTTCCTTTTTTATCTGCAAGAAAAGGAGTATTTCAGTTC
TAACATAACTTTGGACTAGAAAATGGCCCATCTGAAATTGATTCTTTAAGTTATAGTTGT
TAACACCTATGCAGACAATTTTTGCCCTTATGTGACATCGCATCACAAGAGAAAGATGAC
ATCAAGACGATGCATATCCTAAAAGTATTTCAGTCTGCCATGACATAGTGAGGGTTCAAA
TGGACCAATAATGAGTCAAATATAAATTAATTAAATAAGAACTGTGCGCCCCTTTTCTAG
TAACATATTTCAAACTTTGAGGGATAACAAAGTGGAACTGTGCAAGTCATTTATCACCGA
TATGCCAACAAAGTCTTCAATATCTAACAGTTAGCTATTTCGTGGATAAAGTAAAGTTCA
ACAAAAGGATGATGATTATTCCTGAAAAAGAAGCTACAGAACCACATTTACCATTAATAA
TGGCACCCAGATCCAAGCTAAGATTTCTCTGCGACATCAGACACCTCTTCATTTGTATCC
ACGACTTCAGGTGTTTCGTCATCATCAGCTTTAGTTGCTTCTAGCTGACTCTGCTTTGTC
AAACCCAAAGCCCTTCTTGATTCGCTGCGGAACTCTCTTTTGGCCGATCGAACCTCCTCG
AGACCCTGCTCTATCTTAGCCTCTTCCTCGGGATGGAAGAAGCCAACTTCCATCCCAGCT
AGATCTGAATACATCTTCTCAATCTTTGCCTTCCAGGCTATTCCCATCTCAGTATCCATT
TTGTTGTAAGGTGTCTTCAGGAGGTATTCATCGATCCCACCAGCTTTGTCGATGCACCGG
AGTGCATGAGTGGTTACTTTGACTCTAATGTGTCGGTCATGAATATAGCTGAAAAGACGT
TTCTCCTGAACGTTTGGCTTCCAGTTTCGCCTTGACCTGAACAAAGAAAATGCTCCGTAA
GCAAGGTGCTAAAAATACAAAGATAGGAAGGAGGTAAAGAGATTCTTAACAAAAGGCTTG
AGCCACATGGCAAAATAATTAGCAGGAAGTGTTTAAAATTTGCAAACTGGCAGGATGTTT
CTGAGTTGTCTAGCACGTAATTAGACATCCAAAATAAATGGTAACACTATCACTTTTGTT
AAAGATATCCAAGGATGCAGCTCCTGGTAGGCTAGTACTACTGTGATGCTATAGACATGA
TGAAAAGCTGCAAACAATAAGGACACTGGCCAGAGGCTACAGAGTCCCTGAATTAATGTG
GTTCGGTGCTTTAGTTCATCAACCAACTAAAAGTGAATCCACATGATAACTGAATCAAGT
AAACCTGATCAAAAAAAGTATCTGCTCATAGGAATCAGAGTCTACAGAACATCTCTCCAT
CAGCTGCTTGTGGGCAACAGAGCTTTGGGGCCTTATCCTCTGCTGGGCAAGTCGCACTTC
TGCCACCCCACCTGCGACGGTGGCTGACCATGTACAAGCACCCCCAAGCTAGAAGAGAGG
ATTTCAACTTCATGGTCATCCTGAATGTTTGGTCCATCTGGTGTGAACAGAACAGTAGGG
TGTTCCAAGGGATGAGCAAGGACATCCTGGCAGTGCCTAGTCGAATCAAGAGGGGCAAGT
GGTGGCAACGGGCTTTTAAACTACCGGCTGCATGACTACCTGTCTATGACTTGGCGTTTG
TTGCCCAACTAATGTAACTATTTTGCTTCTCCTCTCAATGATAAGATGTGCAAACACTTG
TTTGCAAGTTTTAAAACAAAATAAGTACCTGCAAGGAACAATTGGATTTACATATCAAGA
ATAAGAAGAGTGACTGGAATCATTCTCCTACTGTTCTTCTAAAAAACAGGTGTGTGAAGT
TAATAACATTGGATCATGAAGGACCAAATGAATCATGAGGCCACAGTAACTGTTTAACAT
GGTGTTGGGCTGGTGGCAAGGTCAGCAAGGAGATAAATGATGTTTTGCAAGATTATACGA
TTTCTCTTTCACACATTTTATTTAAATATGACTGAACTTTGATTGAATCTGTTATTATCG
GCACAGAACCAAATAGTGTGGCATAACATAGCTGAAGCAAGTAAACAGCATGCTAACTTC
CCTGACCAGCTCCCTGAGAAATAACACTGATGAGTACGAAGGGGCTCCCTTTCTCTGTTT
TCATGACCTAATAGTGTTTCGCATGGGGTGTTCGTCGCCTGCAGGTTTCCCACGGTCTTG
CCTGTGAGTAACGAGAGCTTCTACGCCTGGTGGGACTCTGCCATGGCTGCATCTCCAACT
TCTCTGCATAAAGGTGTGGTCTCGCTCGGCATCCTTGTCAAATGGCTATGTGGAAGCACA
GGAACGCCTGTACTTTCAACAACTCGCGCCCCTCGGCTACTCATCTTATCCAAACTATTC
TGGAGGAGGCAAGGGATTGGCTGCTATCAGCCCGTAAGATCCACCATAGTCTATTCGTTA
CTTGGGGCTGAGCATCCCCTCTTTCCTTGCTGCTCTCCGCGGATCTAGTGTCGCCTCTTT
GTGTACGGGGCTGTATCTACCATATTGTAATAATTGACTTTCTACATATCAATGAAATGA
TACACAATTATATAAAACATCGATCACACAAGCCAAGAAAAAGGCAGACAATTATATAAC
TCAAGTGCTACCATAATGTGTGGTGTTATATCATAAAAGTCTGCCTAATCTTCTAGATTC
TTGACATTCCAATCATCAAAGAATACCATGCATCAAGTTCTGATACAAACTATCAAAGGC
CGTACAAAAGGGATCCTCAGCTCATCCAATACTCAAGTCGGTGCTGATTATAAGAAACTA
AATCAATTACACAGATGAACAATCCAATATATGATCAGGGACGGATCCAAGGGGGGGCGA
GATCACCCTGACGTATTTTCACACCCTTGATAGTGATTAGATATCTAGCTAATCTAGCAT
CTTTCATGCCTAATTCCCCAGTTAGCCTATCTATAGCAGATTCCAAATCAGATAGCAGGC
CAAAAGGCCCAAAAAAACCAACCCCAAGATCACCATCGGAAGAAAAGAGGCCATGGACTT
GGAAACCTAGCATAAGTCATGTACCCCTAGAAAAAAGCAGAAGTCACGCAATTAGCATCA
CAGTGAGATCAACCAGAATGAGATGCTAATGCAAATGTAACCAGTGTGCAAGCTATCGAA
GAGAACAGTCCTAACAAAATAGTATGTAATATGAATCCTTATTACAGAAAAAATAGTCGA
ATTTAACTATCTAGACCTCATGATATGATTTCTTCCGTGCAAAAAAATGTTTAGTACGAT
TTTGATGGTTCAGTTCTAGCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCTTCTTTTT