| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_62088
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_72726 |
4 |
2160 bp |
MLOC_72726.2 |
Available |
Available |
LOC_Os03g60880.2, FRAME:-1, EVALUE:0.0, 13103.m06689 protein nucleobase-ascorbate transporter, putative, expressed |
| MLOC_72670 |
1 |
1269 bp |
MLOC_72670.1 |
Available |
Available |
LOC_Os09g36930.1, FRAME:-2, EVALUE:2e-120, 13109.m03650 protein aquaporin protein, putative, expressed |
CDS Structure of MLOC_72726
CDS Structure of MLOC_72670
Contig Sequence (6792 bp)
>contig_62088 6792 assembly3_WGSMorex_rbca.fasta
TGCATTTAGGATTTGTGCTTGACAAGTAACCTCTTAGTTTATTTCCGCATTAAGTTCAAG
CCAAATCTGAAGAAGTTTTTAAATAGCCTATTCACACCCCCCTCTAGGCGTCATCGAGGT
CTTTTCAGGTGCCCACTGGGAGTGCGCCGGACGGCGTGTGCCCCACTCCAGGTATTGTGG
CTTGGTTGGGACATCCGCTTTAGATGTTAGCATTTGGTGTGATGTCTGTTTGGTATTAGG
CTCGGGCATTCGGCACCCCTTCATCAAGAGGGTAGGAGTAGCGATAGGTGGTTGCCAAGA
TGGTGGTTTCATATTACTTTGTAAGATCTTTATGAATAATTAATAAAATGATTGCATGCT
TCACCCAAATGCAGGTGTCGGGGATACAACCTCCTTTTCTAAAAAATAATAATAATAGAA
AACCAATGATATAAATGTTCGACTCCAGCACTAATCGCATCCTAGCCACACACACTACAA
CCACAAAGTCGTAACGTAATCTGACTCGTACATGACACTTGACACAAGCTCAACAAATCA
CACTATGAGGAATATTCCCCGACACATTGAATTCGTCCATGTGAACTTCCATGTATTTTG
GACTTATCTATCATCTTTAGTAGCGTACCGAGAACTACCTGATGATCTATCAACCTTCAA
CATACAGATTTATCAATAATAATTTAGCTACGTACAATTATGAAGATCTCTATATATCAT
ATCAGATCTGACAAGTTTATATATAGTCATGATGATCTATCCATCTCTCGGGGTCCATTA
ATCATGAGAGAATTCACCGGATCTATGACCACACGTTTTAAGACGACATTTACAAAAAAA
GGAAATATTTATATTGAGAGATAAAAAGATTGAGCGTTCGTGGAATTGTTTTCGATGCAG
CTACCTTGGACACCGTGATAGTTTAGAAGAATTTCACATAATGGAATCAACGACGAGCCA
GGGTATCAAAGGTTTATGTCTATAGCCACTCTCCCATGAGGATAAAGTACACCTTCCGTC
CGGGTGTATAGGACATGCACGTAGTTTTAGATCGTTAATTAACTATTTAAATATGTATTA
TATGTAATAAATAACATATTATTAGATTCATGCGGATATAGTTTTTGAATATGCAATTTT
TATAGCATATAATATAGAACTACGCGTATGGCCTATATACTTGGACAAAGGTAGTACTTG
GTTACAAGAATATACATGGACGGAATACGTGAGAGCATCTATAGTTGAACATTATAAATC
CGCGGACATTTGACCGGTCACATTTCAAATAATACATTTCATATTCGGATAGCTTAAATT
AGAAACCTTAAATCCATACTATTACATTACATGCAACCTAAACCTAATACTAAGCGAAAC
TCGTCCGGCTCCGCCGTGCCCATGTCTGGTGGCTGGCTGCGTCCCTCACAGTGTCGGTCC
GGTTGTCGGCGAGGTAGAGTAGGCCATGGGACACTAGTCGGCTCATGGGAGTCGAGCTAC
CGTCGTCACCCATGCCCTACTCTTCCTCGTCGAAGCTGGTAACCCAGACGGTGCCAGACG
ACGTGAGGTTGATGACAGATCCTTCATGGTAGGAGCCGACGCTGTTGCGCCGCCAGTACT
AGTGCACCTTACGGGACGCCGGAGAGTGTGACTCCGCCTCTCCAACATCCACCGTCACGA
GGGCCTCCACTGCATCCCGTGCCCACTACCTCCCCCCCGCGGGCACACCACGATCATGAC
ATCATCCGAGGACGGCCATGCTTCGTGATCGGCGCGCCAACGGAGGGATTGCACTTCCGT
CACACCGTTCGGACGCCGGACGGACCGCACCGCCTCAGATGAGGCAGCGATGGCGGATCC
AAGCACCAGTTGTGCAAAGGCATTGGATTCCCAGCATTGCGAGTCCGAGCGCTGCCGTCG
TGCGGGCGCCTTCCGGGAGCGGCATAGAGCAACCCAGACGGCCATCTCCTCCTCGGGGCC
ACGTGGGACGAGCTCGTGGTCGACGGATCTGGAGGTGAAGGACTCAGAACCGCTGCCCGC
CATGCCGAAGGTGAGTCTGGGTGGCGAATAAGAGTCGAGGGTAGTGGAGTGAAGTGGTTA
GGGTTTGGTCCGGTGAATAGATGGAGACTAATATGTGTGATAGATGGGGGCCAACGTGGG
CCAGGCGGACGTATCCGGACGTGTCCGGGCTCCTCCATATTCATCCCATGTTTAAGCTGG
ATATAAGGGGTGTCGGTGAACCTAAACTTTTGATGCCGGTTTGAAGAGTTCGTCTGAATT
GCTTTTTCGTAATCAGTGAGTACCGGACGACCTGTCTGATCGTTTGAGAATGGTTTAAAT
GATTCGATTGTAGATACTCTTACGGACAAGTACTTGAGAAGAAACATGGCGAAATAAGTG
ACCGATCTGGTGTGTGCAGAATTAGGCAGCAGCTTCCCGGGTTATGCGTGCACGAACATG
TGGGAGACCACTGTCGATGAACATTCTTGTTGGAAAAACACTCTCACTATTAATGGAATG
TTGGTGCATATTTATTGTGTTCGGGATCCTTGGGGAAAAATCGCCTGTATCTTTATCTTC
CAGTTTAAACATTGGCTGTGACACCGGACCGTATTATATGCTCACTAACTTCAACGACGC
ACACTAAAAAAAATATACAGGGTCGAAACATCATTTTTTAACGCATTGGAAAACGCTTGC
TCAGCACACGCTGTAAAATAAGACCCACCTTAGTAGGCATGTTAAATTTACACTTGAAGC
CAACATTACATATAATCAGTAAGATACAAATGAAAACGATTGTACGATGGAAATATATTA
TATAAAACTTAAAACTAAAATTAGATAAAGCTTAAAAACTTAAAAACTAGATAAAACTAG
ACTATTCTTCATCATCATCCTCGCTGCTGTCGGACGTTGTAAGAAACATGTCCGTCCATC
GCTCATCGTTCGAGCCCTAGAGCGTGTCCATGTTCTCCAATCACCAAAGCCTTGTGTCTA
TGCTTCTCGTTGCGTTCCGCAAGTCGGTCTGCCCTCCTTTGCACCCAGAACGCGTGTTCG
TCGATGACATCCTGCGGGAAGTGCTCGCGCCACGCCGTCATAGCCTGCTCATCCATCTCG
ACGATGAGGATGCGGCGCTCCCGCCTCTGTTGGATGCGACGTTCCTCCATGGTGATTAGT
CGCGATGGAGGCGCGCGGGCCCTCGCCTCCTCTCGCGTCCGAACTTCCGGGAAGTTCATC
TGAGCCCGTGGCTTCCCAAGCCGTCACTCCGTCGCGTAGTAACGGGGGAGGCAGCTTGGA
AGGTCTCGAATGTGTCGAACCTGGCACATGTAGGACCGGAGCGTAACTCCGCGTAGTACA
CACCGAAGGGGCGGGCGCGGACGCCGCGATAGCTGGAGCTGCTCTGGGCGCGCGGCGGCA
TGGCGGCGACGGGGGAAAAGACGGTTGGGCGAAGAGAGAGGCGCCGGAGACGAGAAAGAA
GCTCGTGGGGCCGGCGGCCCAGATTAAGCGGCGGGGAACAGGGGCGACGAGGCAGAGAAA
GCAGCAAAGAGATAGCGGTTAGCGGGCTCCAATGCGCGGTTTTTATCGAGTGCGCGCAAC
ACCACACGACAAAGCTGCCCCACATGCTGCTTTTCCTCATGCGCAATATTTTTTACCGCG
TCAAACTTTTTCATCTCTGCTGGAGCGCGTCCATCGGATGCACGCCCGTGAAAAACGCGT
TTTCTCCTGCACGCACTGAATCTAACGCGTCTATTCGAGTTACCCTAAGATTGTCCAAGT
TTAAAACAAAATGAAGGGTGGATACAAGGGTAGAGAGGCTTTCAACGTCTAGATGGTGGA
CCAACCTTCAAAGTCTAACGGGTAAAATATTCTTGAGGACGAGGTGATTCACCTCGGACA
GGCGTAAAAATTTGCTTGCTGGTAGATGTGCTACAATGAAAAACATTGCGTTATTTATTT
GTGAAATAAGTTGCTAAAAAATATTTGTGAGATAAAGACATTTTTTTTTTGCTTCACCCA
TTAATTAAGGACAGTGAGACAATGTTTATCATGACCTCTCCGCTCCGGGTAAGATATCAC
TCAAATCATTTGATGTTCTTAAATGCTTGTCTCCCATCGCTCTTGATGTTCGCAACCATG
ATTGGAGGTGGTGCCGAAAGATCTGAGCATTTCGCTCGTTGGCAAATGGACCAATTGATA
AACATCATGATTCATGACGAACGGCGCACATCAACACACGCTTATAGCAAGATTCCGCAC
ATTACAGGGCCAAGAGAAGTCAAAAAAAAAAAAAACCCAACAACTTTTCGACCCTCATTA
CACCGACGAAAAATATATGCATGCTCTCCTCTCCTCGATCTTCAAGCGGTCGAGCCGCTC
CTCTTGAACGAGCCCAGCTGCGTTAGCGACTCCTTCACCACAGCCTCGTCGCGCAGCACG
ATCTTGTGGTAGAACGCCGCTATGGCGGCGCCGGTGAAGGGCCCGACCCAGAAGATCCAC
TGCAGCAAATCAACGAAACACTTAATGTCATCCGAACAAAAGCAATGGCTACAGGAATGG
TGCATGGACCTCAGAAGATCCACTGTACACGATCTTGATACATGGTGCATGCATGGCTCT
CACGTACGTGTTGCTTCCAGGTCTTGTGCTGGTTGTACAGGACGGCGGCGCCCAGGCTCC
TCGCCGGGTTGATGCCCGTGCCGGTGATCGGGATGGTCGCCAGGTGCACCACGAACACCG
ACAACCCGATCGGGAGCGCGGCCACCAGCTGCAGTTAACGACAGATCATATATACAGGTT
GAACAGATGCCGCCGGCCGTGATCACGACAAGCTAGCTGAGAGGAGAGAAGCGGAGACGC
GTGATCGACGTACGGGGACGAAGGCGTCGCGGGCGGTGCGCTTGGGGTCGGTGGCGGAGA
AGACGGTGTAGGCGAGGACGAAGGTGCCGAAGATCTCCGCGCCGAGGGCCGCGCCGAGGG
AGTACCCCCCGGCCACCGCGTTGGCGCCGCCGCCGAAGTCGTCGTACGGGTGCTTCATGA
TCCCCTTCACGATGCCCACGCCGACGACGGCGCCGAGGCACTGCGCCACCACGTACAGCA
CCGAGCGCACCAGCGTCACCTTCCCGGCGATGAACAGCGCGAACGTCACTGCCGGGTTTA
TGTGCCCACCTGCATCAGGTGAACCGATAATTAATCGCCGCAACAACCTGCACATATCTG
TATCTTGTTACGGAGCGTGCCTGAGACGCCGCTGGTGGAGTAGACGAGGACGGAGACGGT
GGCGCCGAAGGACCAGGCGACGCCGAGGTAGCCGACGCCGGTGCACCGCTCGTCGGCGGC
GGAGGACTGGTTCCGGTATCCGATGACGGTGGCGATGCTGACGTAGAGGAGGATGAGGGA
GGCCGTGAACTCGCCGATGAGGGCGCGGTACAGGGACCACGTGCTCAGCTCGCTCGTGTC
CAGCGCCCGGACCGCCGGAGGGTCCCAGTACGGCACCCTCTGGACGATAATGTCTGTCAC
CTCTTCGTTGGCGGTGACCACCTCCTCCACCTCCTTTGCCGGCAAGATCGGCGACGGCAT
GGTCGAGTTGAGCCTCCAAGGCAAGGCAGAGGATTCTATCTGGCTTGGTTCCTGCTGGGT
GCTATGATTGTCCACGCCATGAGAGGAAGCTTAAATAGGGATCGTGGTCAAGTGTTCGTA
CAGCTGCGTGAGGGAGACTGTGCGCTTAGATACTTGGAGGAGGTTCTCTCCTTGGAATCC
ACTACGTGTCCGTGAGCTTCTAATGCACAGGTGATCAGATCGTTATGTTCCAGTTACCAA
ATTATGTCGACCGGATCTTCATCCAGTGTGCAATGGTACATTGCTCGATTTATTTTCTTT
TTATCCCTAAATACCTTATCCCCAATTTCAGATCTCCAACCTTCTCCCTAAGCCTAGGAT
AATTTCAAAATGGGTGACCGGTTAAGAAAAACTAGTGTTGGTCTATGAGGTCAATGTAGA
TCCTAGGTAGTACACGGCACGCGACAACCAGTGTGAGGGTGTTACAAAATGGTTGGGGCC
GATCCTCATGATTACACAGGTGTGTGCGGATCAGTGGCACAAATATGTACAAGATGCGTG
TGATCCATTATGGCACTTGAGATGGCACGTGTGTAGATGTTGGTTGGCACTAGCACTCAT
AGACATGTGATAAGGAGGAAAGTTTTTGTTGGGCCGCCGACGACGTCGGATCTTTAAGGG
GATATACTATAACATCAAAATTAATATGACTGATAGACTGTTCATATCTATAAGGAATCT
CTTCTTTTTCGAGATCTCATCCGCAAGAAACCTCAAGGTTAAGCGTTATTGATTTGGAGA
AATTTGAGGATGGGTGAAAGAATCAAAAGTTGATCCTCGATGCGCACGAGTGAGCACAAA
ACTACAAGAAATATTAGTGTTGGTATGTGGGTCTAGTCTAGATCCCAAATGGTATCGCCT
TATGTTGAGGAACGTCGCATGGGAAACAAAAAAATTCCCTACGCTAACCAAGATCAATAT
ATGGAGATCAACATCTACGAGAGGGAGGAGATCGGATCCACATACCCTTGTAGATCGCTA
AACGAAAGCGTATATAACGCGGTTCATGTAGTCGAACATCTTCGCGATCCAAATCGCAAT
TCGTCCCGCGATCTCATCACGGACTGTCCCGCGATCCCATCACGGTCGATCCCGATCTAG
TGCCGAACGAACGGCACCTCCGCGTTTAGCAGACGTACAACTCGAGGACGATCTCCACCT
CCTTGATCCAGC
