Contig Data
morexGenes
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Map Locations of contig_62034 (3904 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_62034

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72643 2 1254 bp MLOC_72643.1 Available Available LOC_Os07g43980.1, FRAME:-1, EVALUE:3e-133, 13107.m04623 protein DEAD-box ATP-dependent RNA helicase, putative, expressed





CDS Structure of MLOC_72643






Contig Sequence (3904 bp)

>contig_62034 3904 assembly3_WGSMorex_rbca.fasta
GAGGTGGGACTAAACCAGACCAGCGCCTACGTCCCATTCCCACCCATCCTTCCTTCTGCT
GCAGCCGTCGCAGGCTTCACGCGAAAGGCCACAGGAGTTGGTTGTGTTGGGTTTGGGCCT
TGCATGCAGGAGGTCGGCCCATGGACTGACGCCGCCCGTCGCCCGCACTGTGCGAGCCGT
TCGCCAATTCGCCGCCGCTGCTACTCCGATCTGTCTGCTAGGAATCGGATCATAGGCGCC
TTTTTTCGCCCTTTTTGTCTTTCATTGAAACTACAGGCTACAGATTGCACATCAAACAAC
ACTGACAAAGATCATAGGCGCCTTTTTTCACCCTTTTTGTCTTTCATTGAAACTACAGGC
TACATATTGCACATCAAACAACACTGACAAAGATAAAAGACGGACAATTTACCAAGGTTA
GACGGGACCACGACAGACTGCCACAACATCATCTGCTCAATTTTACGACTGCATGACTAG
ATATTGTGATATACAACATGAACTAGCTACTGGTACAAAATTTCGCATCTAGGACGGAAC
TGACTGCCCGATGTCTGCGACGGGGCACACTCCGTCCACAAAGCAAGTCGTAAAGCGTGA
GCCATCTCTAGCCAGGTTCACTTCACTCGTCGTGTTTGCGCTTTCTCGCCTGGTCTCTCT
TCTTCTGGTCTTTCCTGTCTTGGACCTTGTCTTCGTGGCCCTCGTCTGCCATCCTCATGT
TTGCAAGACGCCTCGCTTTGAATACCTTCAATGTTCAGTCAGCAGTAAAAATATAGTCGC
CACAAGAAATCTCTGTCATAAACTAGGGTACCACAATAGCTGTCCAGATGCAAGACTAAG
AAGACAAGCAAAGATTTGTGCATTCGGCCATATGCACAAATAAGAATCCAGCTATCACAC
CTTTGTAATATCTTTGGTGACTTCTTTGTCGTCGCACTCGTATGCACCAAATCGATTTCC
CACGTCATCTTCTATCTCATGTAAGAGACATATATCCCTCTGCATAGACATCCCAATCAG
CATGCAGGTTTTAGTAAGAAGTACACAGTTTTCATTGGGAATCAACAAGTTAACATAACG
CATGAAAACAAGAGTACTGTTTCATAAGGAAATTTGGTGAATTCCTACTGTATACATTTC
TGATTTGATCACTTGTCACATACATGTTCCCATATACAAGAGCCAACTGGTAGGTAAATT
TCTACTTTCAAAGAAGTGATTTCTGTGAGGTAAAATTCATAACTGGCAAAGAACGATTTC
TGCTAAACGTGCATCTTTGGAGGTTAGTTGCTTCTGCCATTGAAGTATTTCAAGTTACTT
AGAAGTAGTTTCAAATTTTCATAGTTTGTACGGAAAGCTCCTCCATATGTTTTTATCGGT
GCATATCAAATTGCAATCAGCTGGATCCGTTACCCATCAACGTTGACATGAGGAGAAGAC
TCATAAAGGTGGATTTTTCTTTCAAATACAAGAGGGCAACTGAATAATAGAACCATGGGA
AAACATCATCTAAACTCAGGCATTCAGCAAACCTGGGTCACAAAGCTTATTGAGAGCCCT
CTCCTGGTAGCTCTTGCAGTTCGCCCAACCCTATGGATATAATCACGTGGGAACCTAAAA
GAAGTAACCACAAGCATCAGTCAGGTATTCACATTCATCAAAATGTTTTAGCGACGAATA
CTTACTAAGTTATTATTATGAATATAAAGCTAGTACAAGATACCTTGGAATGTCATAGTT
GATAACAAGATCAACAGTTTGGATATCCAACCCACGACTAGCCACATCGGTAGCAATCAA
CACAGGGACCTGACCAGACTTAAAACGATGCAACGCTGAAAGCCTGTGTGACTGAGCCTT
GTGAGAGTGCAAAGAAACAGCAGGTCGACCAAGCTCTTGCAACACAAAGTCCAAATATTG
GCATGTCCTATGTGATAATATAAGTGACTTCAGCAACTTGTCATAAGAGCATTGAACTTT
AAACAGTTTACAAATTAAACGTAAAGAGTAACACAGCATTCCATTTCCATCAGACTGATC
TAACCAGCAGAATAATTCAGAGGGACTTCTGAATACAGGTATTAACAATTGCAGGAGTGG
GTAAAATGAAATACGCGTAGATGGGTGCATAACAGAGAAAAAAATTCCCGATTTGGCACT
CAAAACAAAACCAACAACATACTTCTGGTTTACGTAAATAAAAGGTTAATGAGAGGATCT
ATGCCCCTATGCAACCTATTACTAGGAACAACGAATAGTTATGGTACAGGGGAGCATACC
TGCAAGTAGAAACAAATACAATGGCTGAACGTATATTATCTTCCTTCATTTTTGACAGGA
GATACAGAAGATGGAGCTCTTTTCCATCCGGAGGTATATGGATATACTGTTGCTTTAAGT
TCTCAACCGTCTTGAACCCTTCGTATGCCTCAAAAAAATATGACTTGCTTCCCGAGAGCT
CGAGCAAAGATCGCAGATTATCCGACATTGTTGCAGAAAATAGAAATGTTTGCCGCTTCT
TTGGCAAACAATCAAATATCACCTTAAGGTCCTCCTCAAAATTGGAGTCTACAACTCTAT
CTGCCTCGTCCAACACAAGAAACTGCAAAGAAAAGACAGCATACCTTAGAAACCTGAAAC
TAGCAAGAGAGAAAATACTAAAAATTCAAGGATGCATGGATACGGCAAAAATATGGCATA
TTGGAGGTTAGATACGTCTGGATACGGGGATACCTCCAGATGCCCCAAGATACGTATCTG
CCGATTTTCTATTTTCCAAAAAGTAAAAAAAAAAAAAAAAGATAACAGTGGGATACACCC
CGATACCTGTGGGACACAGGAAAACCCTAACCCATCTATCCATACCGATGGCATGGCCCT
CCCTCTTTCTTGCCTTGTTCTGATCTATCCATACCGAGTGCCACGCGGCCACCACACACG
CAAGGAAGAGTGGCCTTCGCTATCTCCTCCCCTGATCTGAGCACCGCCCCAGCGGAGAAG
GAGAGCTAGGCAGAACCGCATCGACGTGGAAGAAGAGGGACAGCCTTTGGCCCTCCCTGT
CTGCATCTGTGCACCGCCACTGGTGCTCCCTCCCAACATCTGATCGCCCCCACTGGCACT
CCCTCCACTGCTTCCTCTCCCACATCTGGCTCCTCACTTGAGAAGAAAGGGCTAGCAACT
GCTCCACTGACAGACCTGAGTATCGCCTCCATCTCCTTCAGTTCCTTCCAGGCTCCGAAG
CGAGAGGCAATATTTTCTGGGCCATTATGAGTTGAGACTTCACCTTTCTAACCATTGCTT
GCTGAAGTTGGTCTTCTCATTGTCTAATATTGTATGGGTTTCACACTACTTTAGGATGTG
CCGGCAAATGATATAGGTAACAAGCCTTTGTGGAATCATGTGGATATCTTAGAAGGAGGT
GGACAAAATGTGTGATTCAGATGCAAGTATTGTACTCAAGAATATAAAAGTAGCCACAGA
AGAATTAAAGCACATTTGCTTAAGATGTCCGATAAGGGGATCAGATCGAGCCCAAATGTG
ATGTGCCCTACTCTTCAGCAGCTTCAAGTTGAAGTTTCAGTGGCTGAAGAAACCTAGGGT
AATGTTTACGGTGCATTTCCTTGGTAGCAAACTGTCCTGTTTTCATATATAATTATTGTT
GTTATATTATAAAATGTTTATTTCATATATAAAAATGTACCATGGTACCTGCACTATTCA
GAAAAAATGTTGTATTGCAGCATTGGTATCCGGGCAACCTAGCTAAGATTCTAGATGTTT
GAGATGCAGTTAATTGCTTACTGTGAGAACAAAGATCGCTCAAATAGGCATGCCGGTGAT
CACACATACTCCCTCCGTCCGGAAATACTTGTCCTAAAAATGGATATAATGGATGTATCT
ATAA