| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_62020
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_72638 |
2 |
773 bp |
MLOC_72638.2 |
Available |
Available |
LOC_Os03g51200.1, FRAME:-2, EVALUE:2e-53, 13103.m05566 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
CDS Structure of MLOC_72638
Contig Sequence (6199 bp)
>contig_62020 6199 assembly3_WGSMorex_rbca.fasta
CCTTCCCCCAAGGTTTCACCGAGGGCATGTGGATTCACCTGCCCTCCGCTTGGCGCTCCG
AAGGTCGATGGCTGGCAGGGGAATCCCGACGCCTCCACAACGGTTAGTAGTTTAGGTCAT
GATTTTTTAGTCTTCATAGGTGTGGCGTTCGGCGGATGGCGATGCTTCTTCTTCTTCAAA
TTTGTCTTCTAAGCTTCAATCCCCCTTTAGTATGTTCTTTTGGATGTAGTCGACTAAACT
CCTACATAGATTATGGTCATCTTCTTGGGACCGTGAGGTTAGAGTTTCTCGTCATGTATG
ATTTGGTGTGTGGTGTTTCAGATATATGCAATTGTTCAACAACAACAACAACAACAGCCG
TGATTTCAGGACGTTAGTACTTAGGAGCACATGCACGAAACCTTTCCGACTGTCATCGAG
AAGGCCAAGCCGTTTCCTATAGGGGAACGGCGCGTCGACGGCTCGTTGTGACGATAATAA
TGATCGTTCGGTGGTCTTGGAATCTTGATGTAATTTTTATTATGTTTGAGATATTTTCTA
CTTTGATAAACTTCTATAATAGATGATTCTTTCCGTGGGAAATTTCTTTGGAAGATACTA
CTTTTTTCGGGTGGGTCGAGATGTATATTTTTTAACATAATACAGATGAAAGCACTCGTA
TACACGTGCATACATTCATTTTTATGGACACACATATGCACGACCTACCTTATGATCATC
TCCGTAAGACTGAGCCGACACATCATTAATTTTTTTAAAATAAATACATAAATAAATGCG
AACACCGAGATCCATACCTTAATGAGATGAAGGTATCACGGTCTCTTTAACCATCCAACC
ACATGTTGATTGGTCGGTCGAGATGTACATTTCCTTGGCGATCCTTTCCTAGATTGCAAA
CGGATTCCAAAGGAGTCCCCATTCGTGTACGTTCCCCTCAAAAATTTCTGCGTTGCAAAC
TGGATCACTACAAACCGAAGCACTGCACAAAGTTTTAAAAAGAAAATCAAAGGACTAGAC
CCATGACACGCACTCTTCTGCATGCGTAAATGGCGGGTGTGCGTTCCCTCACGCCCTTCC
CTTGATTTGCTCACGTCAACCGTACGAACCGGGTCAAAGCTGAAGCCATAGCGCGCCGCC
CGCTCAAACCTCCTCGTCCACCTCCGATCCATTCGCCACCTCCTTCGGCCCTTCCCTTCC
ATCGCACCGAACCACCCTTCCCGCACGTCGACGACGCCAGCCTCCTCATCAACCTCCTCT
TGTCCGCCCCGCTGCCGACGACGATGTCCTCCGACGCGCCACAGACGATCCAGAGCCCCA
AGGCCGCCGTCGACTCGCTCGCCGCCATCCTGGGCCGCGCGCTCCCGGACTCCCTCGCCG
CGGCCGACGACCCCGCGTCCGCGCTCCTCCACGACGACGGCGTCGCCCGCGCCGTCACGG
GGCGCCTCCGCGGCGCTGGCTCGGGGGCCGGCCACGACGCGCTCTGCGGCTGGCTCTACG
GCGCCTTCCAGTCCGGCCTCCCGGTGCTGCAGCTCGCGGTGCTGCGCTTCGTGCCGACCC
TCGCCGGCGTGTACATGTCCCGTTCCGTCTCCCGCAAGCCGCTCGCCGGGTTCGAGGCCG
TGCTCCTCACGCTGTACGCGCACGCCGTGGCGCAGCGGGGCGCCGGGGAGGCCGAGACCG
TAGCGCTGCCCAACATGGCCAACCCCAGCGTGTACCACGAGGCGGTCAAGCCCGCGGCCG
CGGCGCCCAAGCCGGCCAAGGCCGCCGACCCCGACGTCGCCGAGCTCTCCCCGGCGCTGG
AGCCGCACGGCACCATGCGCGCCACGCGCCGCGCCCGCATCGTCGGCGCCGTGCTGGAGC
TCTACCACGCCAAGCTCGCGCTCATGCCGCTGTCCTCCAAGATGGACTTCTGCGAGTTCT
GCGTCGCGTGGTCGGGGAAGCACGGCAGCGACGAGAAGGCTCGGATCGCGTCAGCCCAGA
GCGGCGAGGAGAGGTGGCGGAGGGTGCCTATGCCGTGGGAGCTGTTCCAGCCGGCGCTGC
GGATTGTCGGGCATTGCCTGCTGGGCCCGACCAACTCGGACGAGCTGAGGACGCAGGCCA
CCCGGGCGGCGCAGTGCCTGTACCTGAGGGCCATGGAGACCATGGACGCGCGCGCCGTGC
TGGCCTGCAGGAGCGTCGTCAGGCTGTCGCAGATGGCGGAGGAGCCGATCCCGGAGCCGT
CCTTCTCCGGCGCCGTCGAGGCCAACATGGCAGAGCTGGAAGCCATGAGGGCCAACATCC
TTAGCGGCAAGAACTAACGGGTCGATCATCACTTCACGAGCAGCAAGCAAAGCTGATTCA
TTGCAGACAAAGCTGTTGATGTATAGCATTTTTGTATTCTTCTCATTTTGTTAATCAGAC
ATTTTGTTGAGTATGAAGAATCGATTGGTGAAACAAATTCCTCGTTCTGGCGACCGATCG
AGCGGCTACGTATGTTTGTGATTTCTTTAAAAATGGTTCATGATTTCTCGAATGGACATG
TCCTGCAGTTTTAGGTGCATCAAAAATTTGATGACCACTAGCACAGAAGACACCGTCACC
TGTAGATTTTGGATCTGCAACCTGCAGAATAATGTTAACAGATTTCTGAAAGAGGGACAG
AGACAATGCCAAGAACAGCATTGCCGATCCACTGGACTTTCAGCATTTTGCTGCTCTTCT
GTTTCCACTCACGAAGAGCAAAAGCGAGATGATATCTTCCACAACATGCAGTCATTTCAG
ACCAAGAGCAGAGGCAGATAAATCAGATTCTTGAAACTACACCCCACAGGGGAATTCATT
CATTCAGATGATCAAACCAAATAAAATTATCAATCAATCTTAAAAGAAAGCAACCAGCAA
GCAAGTTGATTAAGAAGCAGACAAGGATATATTCACGGGGGACTGATTCATGCATTGCAA
TTGCAGCCACAGCCATATATACATGGATATTATTTTTCTTTATTTCTTTGTTAATAAGAA
ATCACAACAATATCATTCTGAATGGTGAGTTCAGTTCTTCGCCGTGAAACGAATTACACC
AAGAGATAATTACCAAAACCTGACGACCACAAGAACAAAAGCAACACTGTCATGTGTACA
TGTTGGTTCTGCTTCTGCAACTGAAGAGTTATCTTGCAGATTTCTGAAAGAGGAACAGCG
CTTGATGCTGCTATATTTCCACAGGGCTAAGAGGAGCGGTTTTATTTCCACAGCGAGATG
ATCATTTCCTTCAGACGAAGAGCAGTCAGGTTCTTGTAACTAAAATTTCACAGGGAATTC
AATCATCCAAACAACCAAACATCATTTCGCATATAAGAAACCACATGTATATGTTTCCTC
TCTTCTACTGATCGACCGACTCATTCATTCAACCGCGAGCAGAGCTCAGAAGACACCCAA
GGTTTTTTCCATGACGAGATTCAGACTCCCAAAACACACCCCAACCCAACCAAAAACTTC
AGATGAACATCGTCGTCAGCCAGACATGAGTGACAGGGCAGCCCCTCCTTTAGCCTTGTA
GCAGCGCGCGCTCAGAACTCCTGGGAGATGGACCCGATCTCCCCCTTGGCCCCGGCCTTC
TTGGGCAGCAGCACCTGGTTGATGTTGGGCATCACGCCGCCGTTGGCGATCGTCACCGAG
CCCAGCAGCTTGCTCAGCTCCTCGTCGTTGCGCACCGCCAGCTGGATGTGCCGCGGCACG
ATCCGGGTCTTCTTGTTGTCCCGCGCCGCGTTCCCCGCCAGCTCCAGCACCTGCGTGTCC
ATCGGGCGACGGCGGAAACCATCAAATCAAACACCAATCCGATTCGAATCACGGATGGCG
AACGATCGGGCCAGATCGATCGGAGAACGCGGCGCAGACTGACGGAGAAAAAAAAGGGAA
GGGGGATCTCGAGGGCGGTGGGTTACCTCGGCGGCGAGGTACTCGAGGACGGCGGAGAGG
TAGACGGGGGCGCCGGCGCCGACGCGCTCGGCGTACTTGCCGGCCTTGAGGTAGCGCGCG
ATGCGGCCGACGGGGAACTGGAGGCCGGCCTTGGACGACCGCGACACCGACTTGGTCGCC
TTGGCCTTGCCGCGGCCGCCGGCGCCTGCTCCCGGGGAACTCATCGCCCTTCTGGAAGCT
TCTAAACCCTTTCGAGAGGTGGGGACGGGACGGGACTGGACTGGACTGGACTGGACTGGG
CTGGAGATTTGGTGGGGTGGGAGGAGAACCCGGGCGGCGCCTCGGGTTTTATAGCGTTAG
GGTTGGGGCGCGAGGCTCGCGGTGATTGGCTGCGACGGGGGAGGCGCGGATCGGTGACGT
CGGACGCCAGCTCGGGCAATAAATTCCTTCTTTTTTATTTCCTTGTTTATTTGTTTTCAG
AGGATTTTTTTTGTTTTGATTCGCCTTCTTTTTTTCAGGTAAAGAGAACTGGTTATATGG
AGGCTGTTTGTTGTATAGAATAATCTGAGGGTCAGGTACAATGAAAAGGAATGTGCCACG
TGCACGCAAGTAGACATGCATACATGCATGCATGCGACTAGTAGTGCAGATCACTCGTCC
TAACTTTATTTTGTTGTTTATAAGCTGCGGTATGGTCATTCTGAACTTTATACGGTGCTT
ATATTTCACTCATACGAAACTGATGGTGTCGATTTGGTGTTGCATATAGCTAATGTACGT
GGTATTGGTTTTTTCCACGGCATGGTTTGTTGTCTCGTGGAGTAAATTTTGTCCCCAGGT
GCTTCACGAAGAGGCTGGCCGTAAGATTCACCGCCTCACCGGCTGATGGCACGACCGCAC
ACAAAACTTCTTCACCGACAATGATGCTGTCGCTGATGTATCACGGATGACTCATTTCGC
GAGCAAGTGTGGCGACTCGGGAGACCAACAGGCGACACATACCCCGCCCACGTTCGTTAT
TAATGGCTGCCTAACCCCCACCCACTCTACCTGAGTGATCTTGGATTCACCGCCCCAGGC
TGCGGAGACCCAGCGGCTCGTCCTACCCTCTCGCCTCTCAACTGATGACGAGCTCGAGAT
GGAGAAGGCGAGCGCGCCGCCTATGACCTTCGACGCAGGTGGCGGCTTCAGTGCCGATTT
CGAAGGCGCCGCTGGAACCAGTGGAGCTGCATCTACCAATCGATTCGCACTCACCGGCGG
CAAGGGCGGAAATCCTCCAGGTGGTGCGCGGGAGGTTCCCGAATCAAGCCGCGTGGCCGG
AGATATGCGTCGAGGTCACCCGCAACAGCACATTCGTGGAGCGCTGCCGCTTTGCCGGCG
ACGATGGAGGGATGGATTTCGATCTGATCTTTTGGGCCACCCAAGAAGCGGAATTGGTCG
ATCCGATGCAAGCGGCGAGGTGGTGTCGCTTCAAGGCGTCCAGCCCTTCCAGGCTCAACA
TCACGCCGCCGTCTTTCGAGCAACTCGCCAACATCCCTCTGGATTTTCTACCTTCCGGGT
TTAGCCCCTTCCCCCCGCCTCCCCTGAGTGGGAGTTCCCGCGGGCGTGGACCTGGAGCAC
GCCGCGGGTATGCGCAGGGGGCTCGGGTGGGAGAACCTCCTCCATGGCCGGGGGATCGTG
GCGAGGTCCATCGGGATTGCATAAGGTATGTCGATCTACAAGGTTTAAGTATTCATTTCC
TGCTTGTGCAGTTGAGAACGTTTGTGTTGATGGAAATGGAGCATCGAGGATTTTCCCTCA
AGGCATCATTGATGTAGCTGATAGTGAGGCTTTGGATTCGGATGTTGGCCTTCTATCCAA
TGTCCGAACTCAGGCGATGGTTCAAGCCGACGGCGACCCTGCTTCTGTAGGGATGCCGAC
AGGGATTCTGATAAGGTTTGGCCTCCTTTGGGGCCCAATGTTCCATCGAGGCCGTTCATT
AGAGGGTTTGTGGTGGATAGGAAAGCGGGGAACCGAAAGGCGTATTCCATACCATGTGAC
AAAAGTGAGGAGGAGGTTGCGGAATTTTACAATCAGTTGTGCGTTATCCCCTCCCCTAGC
CACCGCCATACCAACCGTGCCCATCTTCCCCTCCTCCAAAACCTAGTTCCACCCTAGGTA
GCCACCTCTTCTGGATCAGGAAGTATCTGTTTAGATCTCGATGTTTTACTGCTGAAGTTG
TTACCCTGTGATTCATCCTGGCCGTTTTGACCCTATCCCAACCCAATTCCAAATTGAGTG
CGAGGGGATTGGACCTGGC
