Contig Data
morexGenes
Links



Map Locations of contig_62015 (4966 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_62015

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72631 2 1770 bp MLOC_72631.2 Available Available LOC_Os08g34050.1, FRAME:-1, EVALUE:2e-180, 13108.m03558 protein phosphofructokinase, putative





CDS Structure of MLOC_72631






Contig Sequence (4966 bp)

>contig_62015 4966 assembly3_WGSMorex_rbca.fasta
GGAAGGGCCTGCTCTGTATACCATATGGAATAATATGATGCGTCGTACCTCTCCAGTAGG
AGGGCCGAAAGATATATATAGAGATGTAGTCGGTTAGGAGACTAACCAACTAGAGATATA
CATGAGAGAGATAGAGATAGGAAGTTAAATACAAGATGTTACAACACACAATATCCCTAC
AATATCTCATGTCTAACAATGACCTGATCCTGACGACCCACAGGGCCAAGCAGAAGTATC
TCCAGAGAGTCACGGATTCAACAAAATCTCTAATCCCATGCATACAACCTTATCTCCTCT
CAGCTTTAACTACCCTATGTAAATACTATTCATACTAACCCCCTAATTATTGAACTTCTG
TACTAACCATACTAACTTTATTATATATAAAAATCACAGTAGGACGTTTTCCTAGTGCTT
TGGAGTAAGAAATAAAGGACTGACAAGAAATATAAAGATATAAGAACCTCATCATGGATA
GCATTTGCTCCTGCATGGGTACCATTTCCACCAAGTACAAAAAGCATATCAATTCTTCTG
GCCTAAAAAACCAGATAATCATTAATAATTTTCTGAAAAAACATATGATTATTAAAAAAA
TATAGGAATAACCAATACAGAATAAAACTGTTGCAATTCAGATTGCATACCTGTATACTA
TCTACAATTTCACTAGTTTTAGGTCCTCCACGGGAGACTCCAAGAAAACTTCCACCAGCA
AGATTAATATTCTCCACTAGATTACGTGAAAGCTGGATGGTGTTACCAAAATGAAATCTG
AGAACGTAATAAGCAGTAACTGTTTTGCTGATTTCTGAGAGGATTATTCTTACTGGCATT
TCTTTTAGACCTTTTTCATAAAATCCACGAAAACCAAATGGAATTCCGACAATATTCTTA
ACCCCATATGTCTCCAGGGTGAATACAACCTGCAATACACGTCATACCCCAAAATACATG
TCATATATTCAACATTACCCAAAAAATTGCACTCGAGTCTATTATATTATTTGCTTGCCA
GAATATTGGATAGGGTAAATGCTCCGTTCGAAAGGATCAACAAAACCACAAAACATATCT
ATGAAAAACTGCATGGACTGATAAAAAGGATGCAAGGACATTTCAAATGATAACGCTCAT
ATTTCTGTTCGACGATCAGGGGACACGTAAAAGTTCTGTAGCAATCTCATGCACTGATGA
AATTTGCCCTACTTTTATTTTGCAGTTTACATTAGACAAATGCACGTGCGTGTGACACCT
TGTGCATGAAACTCAATGAATTTGTTGTTTTTTATATTATTTGTAGCTAATTAGAGAAAT
CATAGGATAAGCAGAGCTTCATAGCCCCAATGATAATTTCAGAGCTGACTAATCTTACTT
AAGTTGAAGTTCACAATGGGTACCATGGGCATGTACCAAAAGTTAGGTAGACATGCCAGC
AAAATAAAATTGTTTGAACAATGCTAAAAGAAAAGGACCTGTCTGATGACATCATTCAAA
CCAGGGCAGAGGCCTCCACAAGTAACTATAGCAGCTTTTACTTCATTTGGCTCATAGTAT
ATATCCTTACGAGGCCCTGCACGATGCACCCTGCATAAAGCTATTTGTCACTGCCTGACT
CTTCAAGATTCTCAAGTGTTAAATCTAACAAACAAGTAGAAGTTCCGCCATTGTAGAAAA
CAAAAGGGCAGAAGTTGATGTGACATAACACATAACACGTGAAGAAAGATGGCATCCGTG
TGGCACATAAAGAAATAGTACTCATATTGTGAATTTAATACTTTTTGTATCCTAGAAGAT
ATCATACCATTGCTCCACCCAGCTACAGTCAGGATCAATGCACTCTGCTCCAGCAGAAGT
TGGCGAGGAATACTTTATGACCTAAAGTAGCATTGCTATGTTAAGTTCACAGCATAGTGG
GAACAAGAATAAAGCTGCCTTTTGCGAGCTACGTGCTTCTTTAGGTGCTAATAAATGCAG
TGATGCCGTGCATCATAGAAGTTAGCTGCTGAGAAAGCATATACTCCATCACAAAATAGA
TGTTTAAAGTGCATGCAGCAAAAACTTTGAACTCTCATGACTAAGATACAAAGAAGTACT
TAAATTCACCATACGAGAATAGCAGTAGTAGATTTGACATACAGAATATTTGCATAATAA
TATTCATTGTAACTTTAAATACCATATTATTATAAAAGTTAACATCAAAGCGTGCAATGA
TGCTTGCCGATTGCCAATGTCTAAAAAACTACCACAACATATCTTCATATCTTCTGTATA
GGAGTAGCAATCCATCTCACCTAGCTTAATGACGCTTTAACGCCGTGAAATGTTAAATAT
CAAATTAACATCTGAGTCTTCGGGTAAAATTTTCATAGGGAGTACTTACCTTCATAAGCG
CTCGGTCATCATTGCTCACGTAACCATTCCACATATCCTTAGGTGTACTATCTTCATCAC
CAGTAGGAGTTCTACCAGAGTGATAATAGATGGCATTGGATAAGAAATGCTGCATAGCTA
TTAGCTTACAGGAAGGCTGGCTAATTAATTAAAAGATGACAAAGAAGTGAGGGCGCAGAA
AACCTCTGTTTCGTAAGTGAGAATGTAGTTGGCCTTGGTTTCAAGTCATATATATCTGTA
ATTCGTGGCAGATTAAAACGATTATCCCAGTCTTCCTGAAACTTCTGCTTCCAAGATGGA
TCATTAAAATCTAATTCCACTTTTGTGGAAGTAGCTTTAACACGCAGTGAAGCAGGCCTT
TTTGTCTTCTTGCTTTTGCATTCTTTGGCATTTGAATGAGAATATCCATATAAAAATAGA
TCTCTTGTTGAATGCAGCCATTGTTGCTGTGCGTTACAAAAACCACCGCTTGTTTTTACA
GCAACAGCCATTCAAGAGGACCCCAAACAAGACCTGAAGATGAAATTCTAGTTTCAGTCT
TCAAACAGTGAATGAAAAGATTATAAACAAACCAAACAGCTGGCTGAAAAAGAAGACTTC
CCATCTAATGCCGCAAAATAATAAGTAATAACCAGCTCTATGGGGTGGCATCATGGGCAA
GAGCCTTATTCATTCACAGTTCAAGAACAGCGTCAAGCTCGGTCGCCATCCCCACCGCCA
GCTCACTCACACACATCATCAATGAGTGTCGGCATGTACAGCTGGTGTATACTTGCATTC
AGTGTTTCGTGAAACCCAACAGATATACTGCATAACTAAGCTGTGCTCTGCTCATACAAC
AGTCCTGACATGTATGCCTCTCAGTATCCTTGAGATAACTAAACCATAAAACCGTGAATC
TCTGGCCCGGTATGAGAACCAAATTCAGACACTCCAGAGAGCTGAGTTGTCTAGCAGGTG
ATCATGATTTCAGAATTCTCTCGTGCAGAGTCACAAATAAAATTCCGAATCATGATCACC
ATCAAGTAACAATCCCCTGCAGCAGAACACCACAAGTTCAGGGACGTGCCCTGCTCACGT
GGGCACTGCTTATCGGTAAACTCGGTCGAACGGAAACCCTGAACACTCCTCGTACAAAAC
GCATCGGAATTATCCAGTCAGGCTATCATTGGATCAGATCTCTGATCCATCGCCGGAAGA
TACAGCAAAAAAAAATAAAAAAAATCACTGGATGTTAGTGCCTCGAACGAAGCTAGGTGA
AGAAGCATCACCCGGACGCTTAATGCGGCAGATAGCTGAACTGCCACTGGAACAAGGTCA
GCTTACAGCGCTAGCGTTTCCTGAACCGAAATCCTAGCAGGCTTGAGCTTAATAACCAAC
CGAATCGAGACCTCGCTTGTCCCTACATCCCAGCAATAGATCGAGCAGGCGAGCAAGCAC
GGCCGAGGTCGGGGATCTTAGCGGGGGAAGCGAAGCCTGCTACCGGCCGCCGCCGCTGGG
AGTCGCCGGGGGCGGTGGTTTGGGTTGGGCCGTAGCCGTACGCGGGTTCAGCAATGCGGG
CGGGGGTGGGGGTTGGGGGGAGGAGACGAGCGCGCACCTGCCCTGCTCCGATTCCGCGGA
AATGGCGAGACGAGGAGGGGAGGGGAGGGGAAGCCGCTGGCCTGGGTGTGCTCTCCGCCG
CTGGCTGTCGTCGGCCCCTCGCTAGATTTGGTGGCTCACTCTGCTTGCTTCGGCTCGGGC
GCGGCGGAGACGATGGAGTACGCCCTCGAGGGAGGAGGAAAAAAAACGATGGAGTACAAC
GACCCCCACTAATCACCCAATCATTGATGACTGGCTTTGTGAATATCCAATTTGCATATT
TGAATCCGTTATTAACCCCCATGATTCACCCTTTTGATAAATTTTACTCAATGTCGAGGA
AATCCTCAATTTGTGCCCCTGTTGACTGACTTGGTGCTACATTTTACCCCTAAGCCGATT
TTTACTCGATACGGTTTTTTTATTTAGTGCTGGTTTTAAGTCTTTTTTTCATGGTTGAAC
CGGGGTTTTTTTTCTACACCAGACCACATCAGGTCGTTCGCCCACCTGGTCGTGTCGCAC
ATGGTCAATCCAATTTCCTTATTTAGCTTCTTTTTTCCGTGCCTCGTCGACCAATCCTCC
CACTCCCTCCTCCCCCGCCCCACCCCTCATCCTTGCCTTTCTCATGATACCTTTTCTTTC
TCAGCGGTGTAGCAGTTGAGGTTACCATATCGATGGAACGCTCGACCGAGCAATGGACCG
AACACGCGCATTCGTCGTTCAGACGATATCCTCCATCTCGTTTATCTTCATGACCATATA
CTGGCTCTGCTCTGCCTCCATGTCCTAGGCCATGCTCCGTCTCTAGATCTTAAGTGGTCG
GATGAGTTGATCTATCTTCATGTAGAGGAAAGTATGGTGTTTTGTGGATCTAGTAGTGCT
CGTTAGAAGGGTTTGTTTTGGATATAGTGTTGGAAATATGCCCTNNNNNNNNNNNNNNNT
AGTTATTATTATATTTTCTTGTTTAAGATAATTGTTTATTATCCAT