Contig Data
morexGenes
Links



Map Locations of contig_61917 (8855 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_61917

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72579 2 1443 bp MLOC_72579.1 Available Available LOC_Os03g22490.4, FRAME:+2, EVALUE:9e-41, 13103.m02708 protein heavy metal-associated domain containing protein, expressed





CDS Structure of MLOC_72579






Contig Sequence (8855 bp)

>contig_61917 8855 assembly3_WGSMorex_rbca.fasta
CAGCGCCGCCGCCCCGCACGTGTTCATCTGTCGTGTGGTTCGTGGCGCGTGCGTGACGGC
GGCGGGTGGGGACGGAAGCCGGCCGCCCGGCGGGCGCCGGGCCAGCGGGCCCGGTCGAAT
CCCGCCAGTCAGCCCGACACGCGTCGGCCAGGCGGACCGGCTATCGCTAGCCGGTCCGGG
GGAAGGAGGCAGGCGGTCCCAAATGTTTTAAAGACGGCTAATCTCCACTTTTAGTATACC
TAGGGATAATATCCTCGTCATTCATACTTAATGTAATGCATTGTGTTCCTTTCACTAAGA
AAAAGACTGGATTTGTAAGTCCGGTGTAAATGCTCTAACATGCATCCAATCCGAACACGG
GCGAAGGACCCGGTAGGTCGAGGCTGAGCGTCTGCCCTATCTTGATTATGCGCAAATCTT
GTATACTTGTACATGTTACGTCGATTTGTACGTATGCATTTAGATACAGCCGCATGCATC
GATGAAAGAAAGAAAAAACAAGGAAAAGTAGGACATGGTCATATGGGTTGGGTTCATCCC
AACACAACCCCAAAAACCAAGGCCAAGCACAGGAGCATCCACCCAGCGATCCATGCCGAG
CACACGACTATACTCCCTCCGTTCCTAAATTATAATTAGACTTTTTAAAATTTTTATTAT
AGACTGTTTATGAATGTATATAGACATTGTTTAAAATGTAGATTCATTTATTTTATTTGA
TATATAGTCTATAGCACAATCTTTAAAAGGTGTTATATTTAGGAATGGAGGGAGAAAAAA
CTCGTCCTCCGCCACTGGATCCGAGTGCGGGCGGAGCCACCGGCACGCCTTCTTTGACGA
CGCCTGGTACGTACGAACGGAACGCCGCCGGGTGTGTTAACAAACTAACAATACGCCCCC
AGCAGCAAAGCATCCGGCCCATATGTCAGTGTCCTATGTGGTCGTACTCCGCCCCCGCAT
CCACCTATAAAGTTGAGCACCGCATCTGCTGCCTCCCCTGCCTGAGTTCGCAACGTCTTG
AGAGCCACAGACTCGAGCGCCTGCTTCCCAAGCGAGACAAGGTGATCAGTCCCCAGGGCG
CACTCCCATCCCATCCCATGGCGTCGGGACAACCGGCCGTGCAGGTACACCATTTTGCCC
CGTTACGAATACGAACCAACCCCTATGCTCTTCTTCTCGATGAATTGAATTCAGTTGCTC
ATGTGGTAACATTTTTTGGGATCTGCAGACCTTCGTGCTGAGGGTGACCATTCACTGCCA
TGGCTGCAAGAAGAAGGTCCGGAAGGTGCTCAAGAGCATCGAAGGTAGCGTCACTCTCCT
TCTCCTGGCGCCAATTTTGCGTTGCGTTTTCGTGTGGCTTTCGGCTTATAATTAACCAAG
TGGTTGTCGTTTTGGTTGGGATGTTCAGGCGTGCACGACGTGAAGGTGGATGCCCAGCAG
CACAAGGTGATGGTGACGGGCACCGTGGACGCCGAGACGCTCGTCAAGAGGCTGCACAAG
TCAGGCAAACAGGCCCTGCCATGGCAACACACGCCTGCCAAGAATCCCGAGCCTGCGCCG
TCGCCGTCAACCCCAACCGATGCCCCCGCGCCGGCCGAGGACGGCAGCAACGATGCTGCT
GTGGCCGACAAGAAGCCGGCGGTGCCTGCCAAGGAGCCGCAGACCAGCAGCTCGGACAAG
AAGCCGGAGCAGGAGACGTCCCCGGAGAAGAAGCCTGAGATGGACAAGGAAGCAGAACCT
GAGAAGAAGGCTGAGAAAGAGGAGGCGAAACCAAGCGACGAGTCAAAGAAAGCCGGCGGC
GAGGGCGCGGCGGCCGAGCCCAAGGCAAAGGGCACCGAGCCCGCGGAAACCACAAAGGAA
GCCGGCAATAACGAGGGCGAGGGGAAGAAGAAACAGAGCAAGCCCAAGGACGCGGACAGG
TCCCTACCCCCAGCGCCAGCGCATGTGCCGAGGCACCCGCACCACGAATTCAATCCTTAC
AACGCGCCGCAGCCGGTGATGAGCTACAACATGGCGCAGCCGAGAGCCAGCGTGTCCCAC
TACGCGCCGCAGCCGGAGCAGGGCTACTCGCAGCCGCAGGCCGGCTACTCGTCCATGACG
CAGCACTCACCGGCGCAGCAGGCCTACTCCCAGCACGCGCAGCCAATGCAGCAATGGTCG
CCATCATACCTATACATGCCGTACCCGCACGCGTCGCCGGAGTCCTACTACCAAGACTAC
TACAGCCCGCCCGGGACGAACGCGTCGCCGCCGCCCCCGCCGCCGCTCCACGACTCGTAC
AGCCTATTCGACGACGAGAACCCCAACTCGTGCAGCGTCATGTGACCAAGGAGGGAGGCG
GGGCTTGGTAATCGTAACAGAGACCTCTCTGGTTCTAGCTAGAGTGTCTTGATAATCTCT
TCGATTGGGAGGTCAAAGCTCTCTCTTGTCTAATCCTTTTTTCTTCTCTTCTTCCTCTTT
AATTTCTTCTTTTGTTATTGCTACTATTTCTGTTCTAAATAGAGCATGTAATTGTAATGG
GATACGCCTTTACATGTAGTACTAGCATCAATGAAATATCTTGTTCCCTACTACCACTGG
CATTTTGTATAAGCTAAAACATGAGAGAAACGGATTATATGTAATACAGCTAAAAAATCT
TCTCTAGAGAAATTAACTAATTACTATTCGCTTTGTTCCTAAATACTCCCTCCGTCCGGA
ATTACTTATCATATAAATGGATGTATTCCGGACGAAGGGAGTATAAAACTTTTAAAAAAA
AATTACACTAAAAGACTATATATACAAAAGAAAATAAATGAATCTACTACATCCTAGCGT
AATCTTTAAAAGGTCGGGGTATTAGAAAGGTCGTCCTTTGTGCTCCAATCCAATCATGCA
TGTCTAGAGGATATCCTTGTTGATTCTTCTGCCCAGCTCGTGGGCGCCTCTGACCAACCG
CTTAAAAAATACAGCCACCATTGGAGGAGTTTGACAGAGGTAAAAGAAAAAAAATTACTG
CTCTACCGGTATATGATTTCTCATCAGTTGAAGGATGGGCTAATTGAAACTGCCAACTTT
TTTCTTTTCTTTTGCGGGATGAAACTGCCAACTCTTACAATGATACCAAATGGGACCTCA
CCGGAGATAACTCATCTAGTTGCCTCTCCCCGGACAATAATTTTGATCGATAAGGCCCAA
TCACCTTTGCTTTTTGCCACCGATGATGTTAGCACGATAATGGTCTTATTAGTGTGATAG
CTCAGCAGTCGAACTTGTTTAAACCGGTGCTTGAGGTGAGGCCAAGTTGGCCGGTTTGTT
TGAAGGCCTTTTGATATAGGTCATCACTTATACCGAATGGTACCCGGCCGGTTTGTTTGA
AGGCTTTTGAATATAAGCAAGTGGGTTGTGCTTGTCCACATGTTGATGATTTACCACTGC
ATGCTCATCTCAGCTTTGGGTGATCATGTACTGTATGATTTAAATATAATAGTAATAAGA
TACTTCTTCGTTTCAAAATAAGTGATTCAGTTATATACTAACTTTGTATCATAGCTAGTA
TAAAACTGAGTCAATTATTATAAAACAGAAAGTTATTATGTTCACTAGGCTAATCCTATT
TCATTATTGTGGCTTCCGGGGAACAATGGAAAAGTGGTGGACCAATCATGCTTTGTTTAG
TTGTTAAGTTAGCCGCTGGGCACGGATTAGGACAATGCATGGAGGTAGTAGGGCAGTCTC
CACTGGTGGGATTCAATCGGTGTGCTTAGGTAGATCAGATCAGGGCAAGGCAGGGCATGT
GCTGGTTGGTTTGTTTGTTTGTTTTGTGTCAATGAGTCAGACGGATAGCACGCTGGCTGG
CTTGGCTGCGAGTGGTGTGTGTATGTTGGCCATGTGTAACCATTGTATTTTACTATTTCT
TTTTTATTTTATTTTAGACTAGACAGCGGAAATTGCTTTTGGAGCTCGGCCTTCATGAAG
GCCTTTAAATTTGAAATTCAAATTTTATGAAAATTCATATTTTTACATTTTAAAAAATTC
TAAAAAAAAATACAGGAATAAGTGAAGGTGTAACACACATGTGTGTAAATTTTTAGAAAA
TAATACGTTAAAATGAGGGTTGTACAAAAAAGACAAATCCGAGGCTTTTCTACACATGAC
ACTATTCACCGTTTCAGGTCATGATTTTGTTTTTTTTGTGCAGATCGTATTTCAAGGTAT
TTCATCCTAAAATTTTACACACGTACACATAACATCCTTTTTCACTTACATATTTTTTTC
AAATTTTTTTAAAACCGAAAAATTTGAATTTTGAATTATTCACAAATTCCGGCCACCATG
AAGCTCGTCCTCCAAACGTCCGTTCTCACTAGACATCAACTATAAAGTGGATAGTGCTAT
TCAATTCAACGTAAACACAGTGGGTGTTTAATCGCTGTTCTAGCTTGCCTTGTTTTGGTA
ATGGTAGGTGTTTTGATTTCTTTTCCTCCTTGAACGATGCCTACCTTAGGGCATCTTCAA
CGGTAATTTGATAATATTGATCTGGATCATGTATCAGCGATACGACAATCGCTTGAGTTT
TTGGGAGGCTCAAGCGAACGCTATAACTCGGGACTCTTTACTACTAACAATAATATATAA
TAAACAATATATGTATATATGAGATGTATCAAATATCATTTCCTATGCATTCAAAAGCAA
TACTCATCTCAAATTACATATGTATACATAAATTTCATATAGCATTTTGGGATGCATCAT
TAGCAATCTCGCTAGTAATTGTAATTGCAGGATACATGCCTTTTACTAGGTGACATGAGG
TTCTTAAATTTAAGGAAAAATTTGTAATTCAAAACTAGTTGGAATCTACAAAAATACTAA
ATCAATTAATAAAATCTTACCGATTGTAAAGTCGAATTGACAAATTACAAATGCATAAAG
CTCAATAATATGTCACTTAACAGTGTCCAGTTAGCCGATTGTCATCAATGTTGTGTTGCA
ATAAGGAAATAGCAAAATTGTTAATGAAAACTCAGTCCTGACCTGTAACTATTGAGAAAT
CACTAAGGCATAGGCTTGTAGGCTACCATCTCTGGTGGACTCGTTTGTGCTACGTGAACA
ACGAAAACTCCCGACTGCCACTAGGCATTCTTGTGGCCTGCTCGCTGTTGTTTGTCTGGT
CTGTTCCTAGCGGCCGCAACGGCTGCAGGTGCTACGATGAAGCAAGGTGATGGCCTTGCG
GTTACCGATAAGTCCATGCGGTTGGCAAAGGCATTGGCGTGGCGAGGTAATTGAAGGATT
AGCTAAAACAAAAGGTAATCAGATTAATCAGGCAAACCATCATTACGTCTCAAGAATCTA
AGAGCGTTGTGCGACTCTTACATGCCTTATGGAGGTGTGGATTGCTCGAATCATGGACGT
TCAGTTATGGTATCCACTAGCTATTTGGTCCCAACATATGACACACAACATTGCATTTTT
CTTCTGCTCTGACTAAATTCAGGCAATCAAGCTTAATATAAGTGAACATACCTAAGGGCC
CTCTGTTTCGAGGGCCCGGGGCGGTCACCCCCTGCCCCTCATCAGGACCGGACCTGCAAT
CGCTTTACGTTGCGTGGTTAAATGATGTAATTGATGTAGGACGTAATATTATTTCGTAGG
TTAAACATTTCAAAAAAAAATCGGAAAAAACCACCTGCACAACAAAATTGATAAAAAGAC
TATCTCTCAAACGAATTGTCAAAATAGACAATCCTTACTATGGCGGCACGCACGTCAGCC
GACACGTGGCGCTTGCCACCATGCGCGGAGGCGGCAGCACCTGTCGCCACGGCACGAGAC
GAAACTGTGTGGGACGCATGAGTCACAAACGGTATAGTTCAAGATCCGCAGCCAATAATG
CGAACTATGTGCGATACCGGACCAATCAAATAAGATTGAGAAAAAAACAAACATGTGCGA
TTTGTGCCATACAATCCTTCCATACGAACTATTTGTGATTAGCTAAAATAACTCAAACGG
TTATAGATATCCATATGTGTATGATAGAGGGACATAGTTCACTACCATAAACTATGTACG
ATGATACAACAGAACACAAACAATTCGGCATAACAAAATGTGTGCAATATACAACAAACA
GATGAGTAATCGGAATTGTGTGTGAACACCATAAATAACACAAATGATTGGTGCTAATAA
CCTATGTGTGTTGTGGGCAAACGCTTGCTGGTATAAAATTGTCAGCGATTGATGAAATCA
TCACCAACGAGTTTTATAGTTTAGTGTGTGTCTACTCTGATTTTCTCTGTCTGCACAACA
TCTATGATGTGCCTATAGAACAACAACATATGTAATTATAAGAACATGGTTGCATAAATA
AAAAAGAACATAATGACATTTCAAATATTGTGTCATAAATACGAGAAGTATTACAAGGTT
CAAATTCCAGCATTACAGGACCCAAATTCAAAGATTACAAGATACAAACTGATACTAGAA
ATCAAATCCAGTCTTCAGAATCCATGACATGAAATTGGGAGCGAGGCGGGTTGTGGGTGG
ATGTCAAAGGGCTTGATTCCCAGTGAGTCTGCGCTTGCGAGGTGGACTGCTCACGTGCGT
TCCATTGAGCCTGCGCCGCGGACTGCTCGCATGCGTTTCGTCTAATCAAACCTGCACCCA
CAACACCTCCTAGCCAAGAAAATAAGGGGGGTGAATGGAGACACGTAAATGGTTAGTCCA
ACGGAGATGTTTTTATTAATAATCGCTTTTGTGAACTTACCATTTCTTCCTCCTTTGTCT
CGTACTGTCACCACATTGCCGCCTGTGGAATCTAGTGCATGCTTAGGCACCGCACATGTG
TTTCTTTTGCCCATGTTCCTGCGTGGCGTGCTGGTTCTCGTGCAAGCTTTCCCATCGATT
TCCCGCCACAAGGGATGAGCATAAGAGTCGGTGTGCGACACACGGATGCACACCTGGTGC
AGCCTGGCCCATCTACCAAGCATAATAGCCACATCAAGTGTCGTCTCTATCATCAACCTC
CTCGATGACTAAAATGATCTGATGCAGGTGCAACGGCCCGTCGAGGCCAATGATATGCGC
GGCGATGCGTCGGGCAATGTTTTGTTGCGCGTCATCGCAAGGGTTGAGCAGACCCTTGTC
ATAGGGCACGACAGCGCCGCCGAGCAACATAGACGTCTTATTGCTGAGAGGGTGCAGCGC
GCCGTACAAGAAGATCATCGGTGGTGCTCCGTATAGCAAAACATGCACGTCCGTGACGGG
AGGAGATGGAGCGCCGCAAAACAAGACTGATGGAGGGCCGCAGAGTGAGAGGCACGACGC
GCGGTAGAGCAAGAGCGGTTCCATCCACGCTTGCCTGTTGTCCCACCCAACATGACGTTT
GCAGATGTGTCCATGACACGTTAGTACCATGATTTCTCGCCAAGAATGGGCAGCGGACAT
CTATGCCGTACATTGTAACAGCCCAAGACCGACGCTCCAGATGCCTTCCAAATATTTCGA
GTTCTTCCATGTGATTTATGTGGTTGTTGCATTTATCATCGCATCATTCTCATCATCTGC
ATAGAATTCAACACTCTGTTCCCGTCATTTTCTAAAAACTTGCATCCATTATTAGTTGCT
GGTTCTCCCAGTTGCCATCGTTGTGTGTTTCGTGACGAACCACACACGCACGCGCCCATG
GCATCGTTAAAATATTATTTTTAAAAGTGCATATAAAGTATTCTTAGAATGGGTCGAAAG
TTGGCGTGTGGTCCTAGTATAATGCGGGTAGACTGTTTGTCAAATTTCCTCGCATTCGGA
GTCCGTTTGATAACCGAACCGTTAAAATTATAGCGGCATTATATCTAGTTTATTATCGGA
CGTATTCAGTTTCCTATAACATCTGCGGGGCCAAAAACTTCCCTCTCTTCTCAGCCCACA
ACCACCTACACAACCCACTAAGGCCTACCCTAGCCTACCCCTCCGACCAGACTGTGATCG
TAGGGTCGAAAAACACCCCAAAAACCGCTAACCCTAATCCTTGTCTATAAATAGATGGGC
TCCCTACCAAAAATGGCCTTACTTCTCCCTCCAACTCATTTTCACGCCAAATCACTGCCC
CACCACCACTTGTCGCCACCAAATCAGGCGCACCGCCGCTCCTGGACACTCCCGAGCTGC
CACCTCACCCCTCTCCCTCTCCTTCCTCATCCAAAGCTCGCTGAGTCCTAGGCCAGGCCC
GCCCCGGGTCGAGCCGGGCCCGAACCGAGCCATCGCCTCTCACTCCTCCCGAGAGCGCTT
CACCATGACGCCACCCTCATCGCTGGATTTTGTGCCCCATCGCCAGCGACCACCATCCAC
AGCGTCGCTCTCCTCCACCTCGTGCCGCTCGGCCTCCTTGCATTGTCTCGCGCTGGCCGG
CCACCGGAGCCTCCTAGCTTGCACCTTGCGCCGCAAGGCACCTCGCCTCCGTCGCCATCT
CCATGCCATGTGGCTAGCTAGGATCTTGCCACCATCGCCGCCTCGTGCCCCGCAGCTGCT
GGAGCAAACGGATATGTTGGAAACATGCCCTAGAGGCANNNNNAAAATGGTTATTATTAT
ATTTCCTCGTTCGTGATAATTTTTTATTATCCATGTTATAATTGTAAGGATCAGAAACTC
AAGTATATGTGTGGATACATAGGCAACAAAATGTCCCTAGTAAGCCTCTACTAGACTAGC
TCGTTAATCAAAGACGGCTAAGGTTTCCTAGCCATAGACANNNNNNNNNNNNNNNNNNNN
NNNNNACATCATTAGGAGAATGATGTTATGGTCAAGACCCAAACCATAAGCATAACGTTT
GATCTTATCAAGTTTACTACTATTGCTTTCTGCAT