Contig Data
morexGenes
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Map Locations of contig_61817 (4629 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_61817

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72520 3 322 bp AK248862.1 Not available Available None
MLOC_72521 1 544 bp None Available Available None





CDS Structure of MLOC_72520






CDS Structure of MLOC_72521






Contig Sequence (4629 bp)

>contig_61817 4629 assembly3_WGSMorex_rbca.fasta
GGTAGAACCCTAGCCTCTACCAGTGGAGCACCTGCAGACGCGGACCACATGTTTTCCAGT
GCATTACTGCTAGGTTTGTGTGGAGTTGTTTGAATGAGATGTTTAACACGTGGTGGCCTG
GTAATAGAGGAGAGCTTATTAGCTTCACTGAGGGGAGGGGATAGTTTTAGGATTATCTGG
ATAGTTCTTTCTGTCCAATTTTGGGCGCTTCGGAAAATAAGAAATAAGATGATCTTTGGG
AGGAAGTTTACTATTCATCCTTCTGACTACTTGTTTGCTTCGATAATTCACCTGTAGAAG
TGGATGCCATTGTGGAAGGGGACGACACAGGAGGAGATCAAGAAGACAGTGTTGTGTATT
CAGGCGCAGATTACCAGGCTGAAGCAGGAATCAGCACCTCACCAGGACCCAAGCGGCGCA
TGATAGATGTGATCTGAAGTGGTTTTCAAGCCCTGTTCTAATGCTTCTGCTAGTGTTTTT
GTCTCCATAAGCTGGTAACCCCAGCCCTTTACCTTTTCTGTTGGATTGTAAGATTTTGAA
CCTTTGGTCTTCTATAGACCAGGCATCATAATTGAGATGTCTTTTGTCTAAAAAGAAACT
GCCATCCAGGTCACTGCATGCACAAATAGCCGAATAGGTACACAACCCCACAATGGCCTG
CGTCTATCATGGGCCAGGGCAATAACTACAGTACACATTCTCTTTCCTCCCACGCATGAT
TTAGTTTCCTTGTATACCAACAACGGTCAAAGCAGTGCTTCTCTTCTTCCTCACAGCGGC
ATGGCGACCTATGCAGCATCTGAGCAGGGACATGGCGGATGAGGCTTTGGATCATGTGTG
CCCTCCTGACAATGGGTACAGTGTGGGACGTTTGCTGCTTCCCAAGACACTGGTGAAAAA
TGCAGGTGCACAATTTGTACATATATCTAAAAGGACCAGCAAAATCCTGTGATTTGTAGT
TATGTCACTCCCAAACCATGTGATAATTTACATACATCGGTGGTCATTTCAACTATTATT
GAACATTTTGAACACTGAGATCTTGTTTTATTAAACAGTTAAGCATACTAATGATCTGGC
TTGCCTAAACATAAGACAGATATCACTTCAGTTTTAAACATTTGGCACAGGGCACACTGT
AAAAAGCCAGCCACGAAAGTTACTCGTACCAAAAAATTAAGACAGTAAACAATATTATAA
CTTAAATTCCTGAACGTTCAGTCCAAGTTCTACTAGATGATGATGGCTGATGAGTATTTC
TATAGAGCTGAAGCAAGGAATAGATGAACTGATGACATATGCAAAACAGTAGCATATCTT
CAGAATCCCATGATAAATACATATTCAACAACACGTGCACAATCAGACAGCAAAGTAAAA
ATTATTCATATAATTGTATTTCAAGCAGCATGCATGAGGGAACACTAACCATCCAGGGCT
TGGTTGAGTGAACTGAAGTCCATAAAAGTTCTGGACGCTTTGTTTGGAGATGGCTGCATG
AGAACAATGGTGTGCCTTCCAGCCTGCGATAATGTCACAAATAAGATCTTTTATTTTCGA
TGAAGGGAGATTTTGTTGACTCAAAACGCCTCATCATCCAGGCAATAAAGCAGAAAGAGT
TCACAGCTGGACTCTGCGTCGTCAAGTGCACACAGCCCATACATAAGATCTGGGAGGCTA
AACTTTGTATAGAAAAATAATGGTAGTCAGTTTTGAAACGGCCTAAGCATAATTGTTGTC
CAGGCACTCAGAACAGCTGGGAACGGATGTACACTAACAAGGGTTTATAGACTGAACATC
ATGGCAGGTGCCACTTCATTATTTATCTTCCGCCAGTTGTCAGATAGAAGTTATTTCCAG
ATTATCATTGTCGCACTACTTTGAAAGAGCACTGTTAATTGCTTCCAAGTAACATATATG
CACCTTTGGGCCTTGCGACCGGCAAAGCCACCCAGAGTCCTCCTAATCAAACTGAACAAA
AATTGCCAAGCACCACGGCGAGCACACTGAGGTTCGACAAAGATATGGGAGACCAGAATA
CTAGATAACCATTCAGCAAGGTACCAAACTCTCCAAAAGAAAAAAATATGAACTGCGACA
GAGGGCGCGCTACGACTGACATCTCACATGCAAATCGAAGCTACTCCGAGTTTACAGACC
GAACATCATGGCAGGTGCCACTTTATCATTTGTATATCTCCCACCAGTTGTCAGATAGAA
GTTATTTCCATATTATCATTGCCCCACTGCTTTGAAAGAAAGAGTGAGCCCTAAAGAATT
GCTTACAAGTAACATATATGCGCCTTGGGGCCTTGCGGCCGGCAAAGCCACCCAGAGCCT
TCCTAATCGAATTGAACAAAAGTTGCCAAGCACACTCAGATAGTCAGGTTCAACCACAGG
ACACAGGACACTAGAATACTTAGATAACCATCCAATAAGGTATCATGCACACCAAACAGA
GATGAGATGAATCGAAGTTCCTACAAAAGCAAGCAAGCAAGCCACGGTTGACATCTCACA
TCACATGCAAATCCAAGCTACTCAGAGCGTATATACATACAGAAGACACTTCGGGGTGGA
ATGGATGCGCGCTAAACAGGGGTCCACAGAACGAACACCAACGCCCATTAATTAGGCCAA
TACCACATCACCGGTTAGCCTCCACATGTTCGCCAAAGGCAGTTTTTACTTCCAGGATCA
ATCGGTTTTCACATCTCAATTTGCAGCGACATTGGAAAGAGTAAGCACCGCTGATCGCTT
CTAAAAAGGACATAAACGAGCCATTGGACTTTGCCCAAATGCCAAAACCAACACGAGCGC
TTCTAGCCAGGGGAATTAATCAACGCCCCCAAAGGCAGGAGGAGGAAATGGAGAAGAAAA
TTCCCCACAAGAGCTAGCGAGCCGCGACGCGAGGCAGAGGACGCCAACAGAGGAAACCGG
AATAATGTAGCAGTCGGTGGGTTAGATCGCCGTACCATACTCTCGGCGCAGAAGCAGAAG
CAGATGCAGAAGCAGGGGTCCCCCGCGCAGGCGAGCGTCGGGCCGAAGAACCCTAGAAGA
AGAGACCAGCGGCCGCGCCTTTCCTGTGAGAAACGAGAGAGGAGCGGGGTGGAGCCGAGG
AGAAATACCGCTCGCCGGTAGAATGGAATACAGTGAAGACGAGACCGAAAGAAAGAAAAA
ATGTTACCGGAACGGCGGAGGCGGAGGCCGATGGTGTGGAGGCTTGCCAAAAAAAATTGC
AGGTCCAGAGAGTGAGAGGTCCTTTGGAACAAAAAATGAAATCCTTTCACAAACGAAAAC
GTTTCGTCTAAATTGTTGCCACCCGCCGCACACGACCGCTGCGACCCGCTGAATAGTCAT
GCATCATTTTTTCGTCTAAATTGTTGCCACCAACGTCATATTTGTTATAACTGTTTTTTT
TACATTTGTTCAGTAAAAAAGTTGCATATACGTTTGGTTGCAACTCCAGATCGTCGGATT
TTTCGTTACAATCGGTGTTTTTTACTTTTGTTATAACCGTGTTAATTTTTGCTACAACCG
GCATCATTTTTTGCTGCAACCGTTTACTAAAAAAGTTACATACACGTTCACGTAGATATT
TGTTACNNNNNNNNTTTGACTTTTGCTACCATGCACCATCAGCTTTGTTTTTTGCTACGA
TCGCATAGATATTATTATTTTTGCTAAAAAATTTGTTTTTATTGCAACCGTTGAAAAAAT
TGCTACATCGCGTCGAAATTTTGCTGCATCAGAGAAAAAATGTTGCATGAAGATCTAACG
GTGCGGACACACGGCAGTTGGCGGATCAGACGCGCCGGCGCAGAGCACTGACCTTTCAAA
AACATAGGGGAAGCCCGATCGAAATAAATCCTTCCAAACTACCCCAAAAAGGAAGAGATC
CATTTTCGCCGGGTACCATCTCAAAATGCCAAAATGTCTCATATATTTAGAAAACAGAGG
GTGTGCTTTTTCTCAACTAGATTTTTGAATTCATGTCATCTTTAAGATTCAATGGTCAAA
CCTTCATCATGCTTAACGTTAAATTCACCTTAATTATCAGCAACCAGCAAAACGAATCAA
TTCGCATGTGCTTGGCCATCAAACAGGTTCAATTTACGAGCAACAGACGTGTGGTTAATC
TAGGAAATGTATTATAAACACAGAAACAACAACTGGACTAATTTCACAATCAAACTCACA
CACATTCAACTTGGAAACATATTCAAAATATCTTCAAAGGGCATTCAAAAACACATATTC
AAAGAGCATCTAATGACCAATTACCAACACAAAAGAAAAACAAAATCAAACCATCAGAAC
CGAGAAATGAGGCTGACAGTAATAAGCCAAAATAATCTTAGATTCAGTTTTCGACTCCTA
CAATGCTGACACGATATATTGTAACCGACAGAATACTCCAAAACCACAGTACATTGTTAC
AAATTGTGTAAGAACTGAAAAGAAATAATAACATTGGAGGAGACACAAAAACATCCCATT
TGACAGAAGAAGAAAAAAAAAAGCCTTGTTCATTCCCAGGCTCCAGCAAGAGTTAGGCCG
CCGTCGCCGAGAGACCAAAATCCATGGCTTCTTCCTTTCCTCCAAACAATAATCAACACT
CATGTAACC