Contig Data
morexGenes
Links



Map Locations of contig_61784 (4760 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_61784

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72499 3 1521 bp AK367337 Available Available None





CDS Structure of MLOC_72499






Contig Sequence (4760 bp)

>contig_61784 4760 assembly3_WGSMorex_rbca.fasta
GTAATGTGATCATCTATAAGGCTCGACTTGTTGCTAAGGGTTATCGACCAGTTCAAGGGA
TTGACTACAATGAGACCTTCTCACCCATAGTGATGCTGAAGTCAGTCCTAATCATGTTAG
CAATTGACGCATTTTATGATTATGAAATCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATTGTATATGATACAACCGAAAGGTTCTGTCAATCCTAGCA
TTGCTAACAAGGTATGCAAGCTCGAGCGCTCCATCTATGGGCTAGTGCAAGCATGTCAGA
GTTGGAATATTCACTTTGATGAGGTGATCAAAGCGTTTGGGTTTGTATAGACACTACAAG
AAACATGCTTCCTTACGACCTGCAATATTTGTCACCGAATGGTCGTTGGTTTCCATTTGC
GACCTTTTAATGACCAAAAAGAGAAGGTCAAAAGCTGAGGGTCTCTAATGAACTATAATG
ACCTTTCTGCTAGAATCGTCATAGAATTTTATGACCAAACAAAAGGTCGCTGGTTCTACA
ACCAGTCATTTTGGTCGTTGGTTGTTTACCTAGGCCACGTCGGATCCAACGTGTCAATCT
GACGTGGCAAAGTTACGAACAATTAGATTGGTCGATGGTAAGATTCAGCCCGGTCCAACT
TGGTGTTTTACATGGGCCGAGCCCAACAATTCGGCCTTTTTACATTTTTTCTATTAATTT
TGGTTAGCTACATGGGCCAGGCCCAACATTTTAGCCTTTTTAATTTTGGGATGTGGCCTT
TTACTTTCTATTGATTTTCTGTTTTGGACATTTTATTTTTGTACTGGTCCCACATGTCAT
GCTGATCTCAAAATTAGTCCCACACGCGAGAAATTTCAAATTTTGTCAAATAAATATCAT
AACTTGGCCCCCCTTGTGAAGTTTCCATTTCATAGGTATTCAAATCACATTCACAATCAA
TATTTCAAATAGGCTAGGGAGCAAATAAATTTGTCCAAACCAACATTAATTTTGTCTATT
ACAATCTTTACACTACACCACAACCCAAATATGCCTACTACTGCCTACTATTACAATACA
TATGCTACTCTTTGTTGATACACTTCACAGCTTCACACTTGGCTTCGTAATTCACCTGTG
CAAAAAATAAGAATAACATGTACAGGACATCAAACATTAGACAATGATGGATCCAAGTAA
ACGGGTTCCTGGTCGGTCACATATCAAATCTGACATACCGTTTTCTATCCATGTAACCAT
TAAGAGTCTACTTGTACTCCCTCAGCTAGAAATATTGCATCTGCAATCACAAACACAATT
TAAGATTAATGAAAACTGCAATCAGGTAGAAAACAAAATGAACGAAAACTACAATCAGGT
AGAAAACAGAATTAATGATCCAACTAATTTTGGTATAAGATATGTAGAAGAAATATTCAT
CAGATTATATACTTTATGATCAATAATTACATGAGTAAAATGGATAGCCAAAAGGGTTAA
TCCGTATGTGCAAATCTATACTTTTTTTGCTTTACGGAACCAAAACTGGTCCAGAAAAAG
AGATATATTCAGTAAGCTACAGCAGGCACCGACTGGTCTCGAACGATAACAAAAATAGGA
ATACAAACTTTGGTAGGAGTACTAGCATAAATTCATGCCCTTCTTTCTTCTGTATTAATT
TAGGGACCAAATAATGTTGCGAAACTCATGTTCTTTTCGAGATATTATTCAGTCAGCAAA
ATACTAATACTAGTACTGTAGTGCTAGGATATAATAACACAGTAAAATTCTCATGTTCAG
TTTAAATAAGGCCCAATCTACAGAAAACTAGGTATTGCAGCAGCAAACTATTGCAGAGTT
CATCGCCATGAGATTACTACAACAACAAACTATACTCAAAGAAAATGGAACCAAATAATT
ATTATTACTATCAACTTAAAAGGAAGCTCAACTTATATCCATGATTTCCTCTTGTGAAGC
AAGCATCAAACAACACAATAGCAATGAAATTGTACATCCAAATAGAACAAGACGTGATGT
GTTCTTGTGTTAAGAACAATTGCAAGTATTTTGTGCACATCACATCAGATCTGCATGGGT
ACAAACACGGGGTGGAGCTCACCATGTGTGAGGGTAGTAGAGATATGTTGATCACCCATG
AGGAATCCTCCACCTACAGGAGCAGCTTGTCCGCGTCATAGCAAACTGCACGCAAAACAA
ACGCAGTCATCAGAATAAGAGGAGATGCAGAAACTGAAGCTGGATGTTGCATTGCCGAAT
GCTAAATCAACATTCCACAATCAACAAAAACTGAAATTGGATCAAAATTAATGTTTGATG
CTGCTAAATCAATAGTCCGAAACTGAAGCTTTTTCTATATATAAATGGTTGCTGCAAACA
TGCAAATACTAGGAGTGCTACTTGTCTACTGAGTTAAATGCATGGTATTCTTCTTATTCT
TATTAAAGCTAAGAAGCACTCGTGAATCAGGCAAGCAACATCATAGCAGTAAAGCAACTA
GCATCATCAGTAGATGGATTGAACGTGGCAACCCCAACCAAACTTAACTCAGTTGATATT
TATGTCAGCCCAACCAAAACGAAAAAAATTCCCTCTTTATTTAGAACAAGTATATTAACA
TTCTCCGAAACAAAGAATCACAAGAGTCTAAATTGCAGGTTGTAGGTATAGATGAACTCT
ACTTGACAGAGTGCAATATTTTACAACACACAACATTGAATACTCAACCTATTCCACCCT
CGTAATTTATAATAGGCATATTAACATTCTACCAAACAAAGAAGCACAAGAGACTAAATT
GCAGGCTGCAGGTAGAGATGAACTCTACTTGACAAACTGCAATATTTGACAGTACGCAGC
ACTGAATACTGGCACTATTCCTCCCTCATAATTTAGAATAGGCATATTCACATTCTTCCC
AACAAATAAGCGCAGGAGACTAAATTGCAGGTTGCTATTCTATTGGACAGACTGAAAATA
TTTGACAATGCAATAATAGAGCTAGGCTAAAATAGGGTAGTGAAATATGATAAATAAATT
ATAGAAGAAAATAGTGTAATCCTCGGTTCTGTCAGGTAATAATAATCTAGAGCAAGGTGT
CATGGTTATGATCAGCTAGACCTAGGCAGTTGCGTCCGGTGCGGCCGGACAGGGCCCTTA
CGGTGTGAGTTACGATGTACATTCCATTGGAATCGATAGCTGCAATCAAAAAGCAGCAGA
AGCCAACCAAATTTATGGAGTAACATATACCTGCGTTAAGCTCTAGGAAACACATGTGTT
ATGAAATCTGCAAGAATTTGTGAAACACTACTGTTCTAAGAAACGCAAATTTCGTTTGGG
TGCCGCTCTATTATCTTTCGGTGTTGGAGCAAAAGATGACGCTACACAAATTCTGAGTAC
TTTTGTTCTTTCAGCGAGGAAGAAAGTGTAATGGCGGGAATTGGTGGGAAGTACCTGAAG
GGCGGTGGATAGGCCGGCCACTCCGGCACGAACTGCTCGAGCGGGTAGCAGTGCAGTCGG
AGGTAGTCGCGCCAGTTGTGGACGGTCTCCTTGCGCATGTTGAAGCTGGTGGATAGCCGC
ATCTTCTTGGCGGGGTCGTCGGAGTAGAGCTTCGCCTTCTCCTCCAGCGAGAGGCGGAAG
AAGTCGTGCGCCACCTGCAGCCTGTGGTTGAGCACCTGGCGATCAGAAACCACGCACTGT
GAGCGAAAGCAGAGCAACGCCATTTGTGTCGAAAACAGAGCACCATGCAAGTGGGACAGA
ATGGGAATCAGAACCAGGAAGAAGCCATGGGAGGTGCAGGCGGCGCCAATCTGGGAGACA
ACGGCGGTGCGGTCGGGGTCGGTGAGGTAGATGACGGGGATGTCGGCATCGGGCATGACC
TCGTCGAGGCGCGACCGCTCCGCCTCCGAGCGGACTTAGATGTCGGGAAGCATGTGGTGC
ACGGCCGTGGAGATGAGTTGCTCCGCCATGCCGGTGGAAGAATGGGGGAGGGAGAGAGAT
GGAGAGGAGAGGAATGGGTGGGGGCGGCGGTGGTTGGTCGGAGACGGAGGCGGGGCGGAT
CAGATCTGGACACTTGGAGAGACGATACGAGCGGATGAGATCTTGATCGGTCTGGGTGGG
TAGGGTTTGCGTTTTTTTCTTTTTTCCCTGCCACGTCATCGATATGGGAGAAGGAGGTAT
AGCCAATAGGGAATCAACAAACAAAATTGTGTTTGTTTACCCTAATATTTTTGATAAAAT
AAACATGTTAATATTCATCAAAAATTCTCAAATATTTTCCACACCTTCTAGAAAATATGA
ATTAATACCATGTCAATTTTTTTATTGTTTAGACCTTATTTACATTTTCAAAAAAAATAA
ATATTCAATATTTCAATTTTTTAGTGCCCAAAATGAGTTTTTTTAAGGACCTACCATATA
TTTATTGAAAAATTGGACCAAATCATATTTCTAAATTACTAGGACTTATTTAATGTACAA
TTATCACAATGGTTGGGTGTGAAAAGCTTTTATCCACCTCTCGTGAAAAAGACAAATTTT
CATCGAATAAGCTTGAACCGGGTCAAATTTGAACTGCTGCCGTATTATAGTTTGCTCTTT
ATTTTTTCAAAAAACATTTCTAGGTACATAAGTATCTATTTAATCAGAGAAACACCAAAA
GTTTTTCAAGATTCAACCACTAGCTAGGAATGGTTATACCCACCTTTTTGACCGCATTTT
GCAATGAGTATGAAAACTTG