Map Locations of contig_61751 (9042 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_61751

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72488 4 1922 bp AK252673.1 Available Available None
MLOC_72487 1 960 bp AK252673.1 Not available Available None





CDS Structure of MLOC_72488






CDS Structure of MLOC_72487






Contig Sequence (9042 bp)

>contig_61751 9042 assembly3_WGSMorex_rbca.fasta
GACTAGGGGTATTATCTCTACGAAGAGCCCTGAACCTGTGTACATCGTGCGTTCCGTGCG
TGTACCAACCTCGTTCCCAACGTCCACCTTTGTCCCTTCGGTTCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTGTTGTGAGTATTCACCGACAGGCACGAACAAGCATAACTGTCTCAAC
TCTACGGCATGAAGGGTAGAACATGCAAAATAAAGGGTTCACATTAAACACAAAAGGAAT
GAAGGTAGAGAAAAACATACCCTCATTCTCCTTTCCAAAGTAAGTCTTGAAGTAAGATCA
TCCAACTTCTTCTCAAGTTTATCTTCACCTCCCGGAGTGCACCAGCTTCATTTGTGGTCT
CAAGAAGCAATCATAGAATAAGAATACTTTTGATGGACACCAATAAAACAAAGAGCTTAC
ACAAGCCCGGGGATAACAAACAATAACGTCATAGAAGAAATCAGAGATAACATTAGAGAG
ATGTTTGTCATGAACTAAATACAGGTTTATCTTGTGAATTTTGCATAATAAAGTTCTTTC
TATACACACACTTATGGTGACATCTTTGGAGAAACAAAAGAATGCAATGTAACATTCTGA
TTAGTGGCAGTTACTCTGTCTTGATGTAATTGATATGTCTAACTCTTTTGTAGTAACCAA
TTCACCCTCGTACTCAGCTAAAAATAGTATATATTTACTCATCTTTGAAAACAAAACAAG
CATATGGTCATAGGAGAATGTTTGTTCTTGCCATGTTTTGGAAGCTGTATAATCAAACCA
AAATGAATTTAAAATATATTATTAGAATTTGGTCTTTTTTGCTCTGAGAACTTTGGTTCT
GTACATAAATAAGATTTACACCAAGTTGCATGTTTGTTATTTTAAAAAAGAACTAATATA
TGTTTACCAAAATCTTTTTATCTGCTTGAAAATCAAGGATATCCCTGTAGGTGGAACACT
TATCAATGATGTCCTCTCTAATTCAGGGCTGAGAAACTCGAAAACATGTGCAACAATATA
AATCAAATTCAGGTTGGAGACCAAAGTATCTTACAATCTAGGTATTAGGACTTCAATCAC
CACATGTTCTGTGAACTCGTTAACCTGACCCCATGAACCTGAATGATAAGAAAGTTACCT
CAATACTTTGATGCTAGATTGAAGAAAGATATGCAAATGCTGTCAAGAAACCTCATAGTG
CAAAATAAATCACCAAAATTTACTATGCACAACCATTCACATATACAACCTGCAGAACAT
GAGGGGAATATAAGAAGAGAGGTCAAACACAAGTTTACCTTAGGTGATGAAGGATCCTAG
GCACTACACCGACGCCGCGCTATGCAGGGGCATCCACGTCTCCTCACCTGCCGCCATCGA
CCTGCAAGTAATCTCGACGTAATTAACATCCGTATTAATGGGCTCAATTTGCATAGAAAT
ATATGTATACATATTTCAAATGCAAAGAATATTTCAGAGTGTTTTTTATCAAGTTCCAGA
GTGTTTTTAATCAACTTTCAGAGTGCTTTTCCTCAAGGCATAAGTGAAAGCTTTGGATAG
TATACTATAACAATTAAATAATACAAATCTGATAGTTAAAGAAATATATAACATCCAACC
ATCCATTTGGAAAAGACCAAAGCAGTAGTACACATATGGGCAGGCAACAAATATAATGTT
TCCAAAAGCATTCACTAAATATACACATTACTCACCATTCGGCATGGATGGTGAGCTATC
TCAAAAACAATAAATATACACATTACAATTATGCTTCAAATAATGTGCAGGTAGGGAATA
TAATGTTTTCAAAAGTCTCTACTATGATCAGGAACTTGCGCTCAATTCTGTAGAGGAAGG
CTCGCTCCATCAATCGGCCATGAACACCACCGGCCATCGGGATGCTCTGAGCTGCGGAGG
AGAAACGAGCAATTGAGAGAAACGAAATTTATAAGAAAGTGTCTCAACTGTGTCTGCCGT
TGCTTGCCTGAATAAATCACATGGTCGTAAAATTTGGGTGTCTCACACCTAGTGTATGGC
TGAAAAGCTCGAACCTTTCTATGGAAACTTGGCCACCCAGATTTAGTTGAGATGACAAGA
ATTTGCATGCACTCACAAAGCTGGGATTAATATATGATTTTGACACGTCCACCTTACCAA
AAGATCGGTAGTATAAGCTTACCAAAATCTAGTACTTGGTTTTTTTTACCAAAATCTACA
CGTCGATATATAACCATCTATCGGAGAGAAAATTTGTTTCCGATATTACATGCTCATGCG
TGTTTCAATCGTTGGATGGCGACTTACATCCTTTCAATGCAGGAGTTGGACAAAATTCAT
CTGGCTGAGATCACATCCTCTTAATGATGTTCTACAAGAGTACAACATCGACATTTTGGT
CAAGGCCACAAGAATATGCTGCAACAGATTGGCATTAACCATCAATCAAGCACCTTGCTG
AACAAGCCAAGTTAGTCGCACGTCAACAGCTCCATGCTGACAGAGAAGACAATAGCGCAT
GCACGCATCCAAACCAAACAACTCTGAAACTCTTGCCAACCGGCATGGATACTACAGGAC
ACCCCAATCAAATACACACCAGAGAGGAGGAAGGAGGAGGGGATGAACTCACCATGATAG
AGCGGAGGAAGCCGACGCGCATGTGCACCCCATGCCCATCGAGCGCAGGAGCGCCATCCA
GGAGCACAACCGTGGTAAAGGACGGAGAGGAGCCGCGCCGGCGACGAAAGTGACGCCGCG
CTCAAAACCCTAGTCCCGCACACTCATGGAGACGCTGTGTCTTATTGATGGATGCATTGT
TGCGTCACTCGCTCCGGGCGTGCCAGACTTGTGTAGGGGTGCCACACCTTTCCCATGTGG
TTCCCATGCATGCCAAAGTTGTCGTCGCGTGCTGGCACTTCTTCGCCCTCTACTTGTTCC
TTCGCATCGTCGTGCGTGTTGCTAGTGGTGGAGGATGGTTATCTGAACTGGCGTAACATG
CAACCGGACGCTTAGGACCCATCCATACAACTGCGCGCTGGAACCCTTGTGAGGGAGGTG
GGATTAGGGAGGAGGGTTTGTGAGGAGGGAGACGAGGTGGGAGAGATCGATGGGGCTCTC
TTTCGATCGATGGGAAATTTTCAGGAGAGATGAGACGTGAGACGTGTTTTTTTTAGGGGT
GAGACGTGGTGTGATGACAGTTTTTCTTTCTGGAGGAAGTGGGCCGTCTTTTTGTTTGGT
GGAAACCCACGTGGGAGGGGAGCACATACGACGGGAGGGGGATCGAACGAGGTTGATCCA
TCACGACGACAGATCCCCTTTAATAGTAGAAAAATGGGTTTCAAAATGTTTCACTTAAAC
ATGTTTCTTTTCTTTCCATTTTTAATAATAAAAACAACACATTTACCTGTTGTTTAAAAA
TGAGTAATGTAAGCTATTTGCTTGTACCGACGAGAATCACATGGATTTGCAAGGAACTGT
AATCCCTTTCCTCTGCCGAAAACACCTAATCAACTGGTTTGGAGTCAACTTTTTTTTTTT
TTTTTTGGAGACAAGGTTTGGAATCCACCACCTAAACTGCTAACCCTTGTGTTTTGATTC
TTTCGGCTTCCAAAACCAAATCCAAAGATACCAAACGGGTCTCTGTCATCGGCAGGCTAA
ATGGAAAACTCCCGGTCCCGGTGGGCCACGCGAAGGACCAAAGGCCGACGACCGTTCCAA
AACTCACCGCAACCAACCCTAGCCGGGAAAGCCCAAGAGCAACCACCACCCGCAGCGACT
CGTCAACGTGCGCGCGCCGGCCTCGCCCGGCTTCCAGCTCCAGGCCCATGTGGAACCTTC
GAGAACCACGAGACCCGCATAAATAGGCTCCCACCCCCACGGCCTCTCGTCCTCTCAAAA
CCCCTCCTAACCCTAGCCGCCTCCCGCACGCTTCTCCTCCTCTCCGCTCCGCTCCCCACC
TCGAGCAGCTCAGGGACGCAGCCATGGCGACGGAGACCGAGACCTTCGCCTTCCAGGCCG
AGATCAACCAGCTCCTCTCGCTCATCATCAACACCTTCTACTCCAACAAGGAGATCTTTC
TCCGCGAGCTCATCTCCAACTCCTCCGATGTAAGCGTTCCCCCGGATCCCCTTCTCCGTC
CTCTTTTTTTTTTTTTTTTGCGCCGTGATCCGCGAGCTCGAAACCATCCGAGCGCATGGT
AGATTTGAGACCACGCTAGGCTTTAGATATGCTGCCGAGAGCCAGATCCGTTGACCCGCG
GTTTGATTCGTCGCGTGCGAGATGCGTTACAGATCCGTGTTCCCGGGCTGACATGGTGTG
TATGCCGTTGTGGTTTTTCGCAGGCCTTGGACAAGATCAGGTTCGAGAGCCTCACGGACA
AGAGCAAGCTCGATGCGCAGCCCGAGCTCTTCATCCACATCATCCCCGACAAGGCGACCA
GCACGCTCACGATCGTCGACAGCGGCATTGGCATGACCAAGTCGGACCTCGTCAACAACC
TCGGGACCATCGCCAGGTCGGGCACCAAGGAGTTCATGGAGGCTCTTGCCGCCGGCGCCG
ACGTGTCCATGATTGGGCAGTTCGGTGTTGGGTTCTACTCCGCCTACCTTGTGGCCGAGA
GGGTCGTCGTCACCACCAAGCACAACGACGACGAGCAGTACGTGTGGGAGTCCCAGGCCG
GTGGCTCCTTCACCGTCACTCGTGATACGTCTGGGGAGCAGCTTGGCAGGGGTACCAAGA
TGGTCCTCTACCTCAAGGACGACCAGGTATGCTGTCCAAGCCTCATATGCTGTGATTGGC
TTACTCTTCATGTCTTGATGTGGTTCTGTGCGTATTGTAGCTCTTTTGGACGGTTGCTTA
TTTGTCTTGTCCCCGATCTGAACTGTAGCATGCTTTTGTGGCAGTAATGTCTGCACTGCA
TAAGCTAAACTCTGTTAGTTTCATGATCAACTTGGCTCTGCAGTCCCAAGCCAACTAAAC
TGTGATTGACCTGATGTTATTTTGTGCAACATATGAAGCTGTCCGTCTTGATGTGATTTT
GTGCTTAAAACGGTTGCTAGATAGGCTAATCTCGTTCTGAACTGTATTTCCTTGTGTCTA
GTTGTGCACTGCATGAGCTAGGTTTTGCATAAGTTTGACTTGTCTATTTAGGTGGACGTT
TGATGCTGATGTGATTAGTTGTGTATGCAGTTGTATCTGAAAGGCTTGCCTTGCTTAACC
AGCTTCCAGTTAGAATTCGAATAGTTTTGTAGTAATTTGATACCAGTAATTTTAGCTTTC
CTGGACTCAAGCTCATTTCAGATCTGTGTTGGTTGTAGCATATGTAACCTGCTTAGGATA
AATGTGAGTTGTCCCATGCATTGTAACTATGATTGGTAGTATTAGTTTAGATTTGATGGT
GAAATTGTTGAATTGATGTGTTTTTTCTGTATCCTAATGCTCTCATATATAATGAATGCA
CAGATTAACTCATCCTTGTTGGTTGACCCTCTCTTTTAATTAGTAATGATTGAATGCCTT
ATATTGTGTTCATCTTCAGTAATTTATGGCTCTGGCCTCTTGCAATTAAACATTACATCT
GTTTGCATTGTATCACTTTTATGGAACTGTTAAAAGTAGTATTATGGATTTATGCATCTG
CATGGAATTTCTACCTGCTTTTTTGTAGTTTATTTTTAATTTGAGCATTGCAGGTTGCAG
CATGTTTGGTTGTTCTTTAAATCTTTCTTTTGTGTGTCTTTGTCTGCACTTGCTTTCTGT
ACATTGTCTGATTTGTTACAATTTTCTTCTAGATGGAATACCTTGAGGAGCGCCGCATCA
AGGATCTAGTTAAGAAGCACTCCGAGTTTATCAGCTACCCCATCTCCCTGTGGACTGAGA
AGACCACCGAGAAGGAAATTTCTGACGACGAAGACGAGGAGGAGAAGAAGGATACCGAGG
AGGGCAAGGTTGAGGATGTTGATGAGGAGAAGGAAGAGAAGGAAAAGAAGAAAAAGAAGA
TCAAGGAAGTCTCTCATGAGTGGAACTTGGTCAACAAGCAGAAGCCTATCTGGATGAGGA
AGCCAGAGGAGATCAACAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACCAATGACT
GGGAGGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTTGAGTTCAAGGCTG
TCCTGTTTGTTCCCAAGAGGGCCCCCTTCGACCTCTTCGACAACAAGAAGAAGGCCAACA
ACATCAAGCTGTATGTGCGCCGTGTCTTCATCATGGACAACTGTGATGAGTTGATCCCTG
AGTACCTGAGCTTTGTCAAGGGCATTGTTGATTCAGAGGACCTTCCCCTGAACATCTCCC
GTGAGACTCTCCAGCAGAACAAGATCCTCAAGGTCATCCGGAAGAACCTTGTCAAGAAGT
GCATTGAGCTCTTCTTTGAGATTGCTGAGAACAAGGAGGACTACAACAAGTTCTACGAGG
CCTTCTCCAAGAACCTCAAGCTTGGCATCCATGAGGACTCCCAGAACAGGACCAAGATTG
CTGAGCTTCTGAGGTACCACTCCACCAAGAGTGGTGATGAGCTGACGAGCCTCAAGGACT
ATGTAACCAGGATGAAGGAGGGTCAGAACGAGATCTACTACATCACTGGTGAGAGCAAGA
AGGCTGTGGAGAACTCTCCCTTCCTTGAGAAGCTGAAGAAGAAGGGCTATGAGGTCATCT
ACATGGTTGACGCCATTGATGAGTATGCCATTGGTCAGCTCAAGGAGTTTGAGGGCAAGA
AGCTTGTCTCTGCCACCAAGGAGGGTCTGAAGCTTGATGAGAGCGAGGACGAGAAGAAGA
AGCAGGAGGAACTCAAGGAGAAGTTCGAGGGGCTGTGCAAGGTCATCAAGGAGGTGCTGG
GCGACAAGGTGGAGAAGGTCATCGTCTCTGACCGTGTTGTGGACTCACCGTGCTGTCTGG
TGACTGGTGAGTATGGGTGGACCGCCAACATGGAGAGGATCATGAAGGCCCAGGCCTTGA
GGGACTCGAGCATGGCTGGCTACATGTCTAGCAAGAAGACCATGGAGATCAACCCTGAGA
ACGCCATCATGGACGAGCTCCGCAAGCGTGCCGACGCCGACAAGAACGACAAGTCGGTGA
AGGACCTGGTGATGCTTCTCTTCGAGACCTCTCTGCTCACCTCGGGCTTCAGCCTTGAGG
ACCCCAACACCTTCGGCACCAGGATCCACCGCATGCTCAAGCTTGGCCTGAGCATTGATG
AGGACGATGAGGCGCCTGAGAACGACACCGACATGCCGCCCCTGGAGGATGATGCCGGTG
AGAGCAAGATGGAGGAGGTCGACTAAGCGCCAAGGCTGCCCGTCGTCGTATGTCCATGCC
CTGCACCGTCTAGTTGCTTTTATCTTAGTGTCGTCGTTGGATGGTTTTGGCACGTCTTAG
CTGTATCGGTTTTGTCTTTTGGCTGGCCAAACATTAAGCGCGGTTAGCTTATTTGTGGTA
CTCGTGGAACAGTTCGGTTATTGTTGGTTCTACTATATGTTAGCTATATTTCTTCTATAT
TCCCTGCTTATTGCTTTCATCTGCTTTTAGTATGTTTTCTCTTAAGCTTGTGAGGCCCCC
ACTTCTGGGTTCATTTTTCTAGGTCCATCAGTCCAGCTAAATGTTAATTTTCCTTATGGC
AGGGAAAAGATTCACAGTTAGTCACAGAATAGAATTTGTCTGCTGTATAATGTTTATTTA
CCTGGCAGTGTTTCGGTATATTTCCAGCTTTACACCGCCCTAGAATTAACACTGCCCTGT
TCGAAATAAAAGAAGAACATAGGAATTTAGAAAATAGGATATCTGTTGGAACTTTTCTCT
GCTATTGCTTTTATGCCTTCGCTTTTCGATTTGTATCAAATTCACATTAGCAGTGCAAAG
GAAAACTAGTAAAACTGCCATAATACAAACTGTTTTCTAACATTCTTTTTATACATATTT
TAGAGTGTAGATTCTTTTAGATTGCTCTGTATTCTTATATTTTGAAACGAAGTACAGCCA
AAGAAAAGAAAAAAGAAACTGCCACTTTTGGGGTAGTGCCCTCGGCTGGTTTGCAAGTAG
CACCGGTCGCGGCATGGACACGATGGTCGGAATGGAGGTCTAAAAGATGTCCAGCCGATT
GGCTAGTGTCTTTGGCTTGATGTCAAGTACATTCTCCCGTGTCTTTAAAATGATGATTGT
GCTTAATGTTGGTGGTAAAAACTCTTGTTTCGGCTTGTTTGGTTGGGCTCTGCAGCGACG
AACTTGCATCGTTACTTTTGTGTAGACATTGTCTTGTTTTGCTGATATGCTAGTGTTCTT
GCTGATGTTGGTTTCGGTAATTAAGATGAAAAATCCTTGTTCTGGCCAGCTAGACGTGAC
GACGATGGTGCAACCGTATCTTGAACTGGCCAACAGTGATTGCTTTTGCTCTCTACTCTT
CTTAATAAGAATGACCGGATGCATCCAGAAGCCCGGCGCAAAAACCTTCTTTTAAAAAAT
AGCTATTTGGCTTCTTGTGTTACAAGGTTTGTCGTCATGGACCTTATACATTCCCTTTAG
GAGAACTACTAGATAGTTGCAACACACAAGCCAGGTTTGCTCCCCGTCAAAACTTCACAC
CAGGTTGTCCAATAATGAACAAACGATCATCTAGATTACCTCCACAAAACAAGGTTCGCA
TAAAACCAAGATAGAAAATTGCCTAACTACGATACCATCATAAAGTTTCAAATAAGACTT
GACTTCAGATTGCACAGCACTAGTAAAAGTGTTCGTGCGTTGCAACGGGAGAAAAAGAAA
ACACGCTCTTAATCCAATAACCATGATTCAAGACCACGTCCATTAATTTAGGCTTCATAT
TTTTTATTTAGTTTTTAAAACACCTATCAAATTAAACATTTGGCTATTCATTTCATATGC
AGGTACTAATATGTACCCCTCTGTCACGAAATAAGTGACTCAAAAGACCACAAATCACAA
TTTCCGCTTGACCTATAGTAAGACCCAGATCACAAATGCAAA