Contig Data
morexGenes
Links



Map Locations of contig_6173 (4474 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_6173

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72476 14 3514 bp MLOC_72476.1 Available Available LOC_Os01g66820.1, FRAME:-1, EVALUE:1e-84, 13101.m07231 protein inactive receptor kinase At1g27190 precursor, putative, expressed





CDS Structure of MLOC_72476






Contig Sequence (4474 bp)

>contig_6173 4474 assembly3_WGSMorex_rbca.fasta
TGAACCACAAAGCCCTTGGTTACCAGAAAATTTCGAAGCCGGGAAGGTCTCTAACAGAGT
AGGAATGGGCCCTGATGACAAGTTGCCCGCCACATTGAACGTGCTTAACCGAGTAAGCCG
ATTGAATTGCGGTGGAATTTGACCGCTGAATTGGTTATTCTGGAGGTTGAGGAGATTCAG
ATATGTCATGTCTGAGATACTCTGTGGGATTGATCCCGAAAAACTATTGTACGAAAGATC
CAGAGATGTCAGGGGCTGCACAAGCTGTAACAAGTCGGGAGGGATTGGTCCTGAAAAATT
GTTTTATGACAGGTCCAGGCCGGTCATGCTTGTACAATCTTGACGACCCTGAGGAAATGG
GCCTTCGAGTCCTAGGTTGCCGAGACGCAGAGAGAGGACCCTGTTCTCGTCGGGGTGCCA
GCATTCAACACCGGTAAAGCGGCATATGTAACCGTTGGTGACATTTTCAAAGTTTCAAGA
GGATTTGAGTACGCCCAAGGGATCAATCACTGATTGTTGTACAGACCTCAGGCACTGGAT
ATCTTGTTCAAAACCAGAACACGACGATGAGCTGCTCATGAGAAGAAACAAAAGGATGAA
CTTGGTATCATCAGCCATCGCAAAAGGGGAGAGAAACATAGAGCTGCTCTGCTGGGCCAA
AAGCTGCAACTTGTTCCAAATGTCACCTGATCAAAAGTTGTGTAAGAATACTTGACAAAA
AGAAGAGATAGTTTGCTAAGACATGAAGACACCACAAAGCAGACTCCAGAAGAAGCAAAT
AAGTCACATGTACTCGCTTTGTTGATTTCATGCAATACTTCATACACAAGAATAGGTGCT
TCAGAAAACTCACCAGTTGATTGATCCAAAGCAGAAGCCACGACCTGCAATGGTTGAAGG
GGCATAGCTCTTAAAGGGGCAACCCCTCCGCTGGAGCACAGACTTCTTCAGCTAATTAAT
TCCTCAGGTCCTACTGAATGGGAGAGTAGCTAGCACAGGGAGATTGACCAGCTCACTGTC
CCACTCTAAGCAAGTAAGCAGTCAATGAAACTCAACACCAAAGAGAAAATAGTGGTAGGA
CTTTCTGTGATGATGCCTCGCGTCGTTCATTTATGAGGCTAGAAAAACTAAGGCATATGA
GACAGACAGCTACAACTTTGTCAAGAGTAAAGACAGTGATCCTGGTCCTCGTAGGCACTT
GGATTAATTCAGGATCAAACCGCGACTTGTTGATTATAGAATTAAAAACACTTTATATTG
GGCAAAGCATGGACAAGATCAGATAAACGCACATCAACACGAGAGGTTTCACATTTTTTA
TTATTTATTTGGATCATGAGATATTTGTAATATTCAACAGAATGTAGACGTACTTCACAC
TTGTGACCACACACACGACTTGTTTTCCCACATATTTACCACTGAATAGACCAACAAAGG
AAGCTGGCGCATTCTCTAGCCCAGTGCTCATGTACAAACACGAAAGGTGTAGGGCTGGAG
CCTCCCACAGAACAAGAACTTGTGCGGAAAGTAGAAGGCCACCACGAACCCAAAGATGAA
CCCAGCGGACGCCCCGATGATGGACGCATCGTTGATCCTGTGCAGTAGCTTCCGAATCCG
GACAAACATCTCACGAATCCAGATAAACCTGACGTGTATCCGCACCCTGAACCTCTTCTT
GCACTTCTTGCCCAGCGGGGCCCCGCAGAGCCCCGGGTTGCCCGTGAAGTTGCCAGCCGG
GAAGCCCTGCAGAGAGTCCGGGACAGGACCCGTCAGCGAGTTATCGGCGACATCGAACGA
AATGAGCCGTGAAAGGTTGATCGCCGGAATCCCGCCAGTGAACTGGTTGTGTTGAAGAAC
GAGGACATTGAGGTACGTCATGTTCATGATGCTTGCAGGGATTCCACCTGAGAAGCTGTT
GTTCGAGAGGTCCAGAAAGCTTACATAGGGCATCTGCTCGGAGATGCGCTCCGGCAGAGG
GCCTGTGAAGTTGTTGCCTGACAGGTCAAGAGTGGTCATGGAGGTGCAAAGCTCGAGGCC
TCGAGGGAATGGACCTTCGAGTCCTAGGTTGCCGAGGCGCAAACTGAGAACCCTGTCATC
AAAAGGGTTCCAGCACACCACGCCAATGAAATCGCACATGGGACTGTCAGTAAAATTCCA
CGGGGATTCGTTTTCTGAGCCGGCTTCGAGTATACCGTTGGGATCAATCAACGACTGTTT
GAGGTCCTTCAAGCATTGGAGATCAGAATCACTGATTCCATGGCCAAAGTACGATGACGA
GCTGCTTAAGAGCAGCAGCCAGACGACCAGCTTCGTGTAACCATGCATCATAGAACCTGC
CGTCTGCCTTCCAGTGTCACCTGCTCCACAAAAATATGCACCATCAAGGATGTTCTGGCA
TATCCTTGTAATGTTTTGTATGAGGATATGCGATATAGTACTACTGTCTAGCACAAACCT
TTACAAAGACGTCCCTTCACAAAAACGCAGTGGCAAACAATAGAAAGAAAAAATCCGGCT
GTTTTGAGCTCGTCTGATCCGTACCTCACAGTTGCTCACCAATTATGCAGCAGAAAGCAG
AGACGGCACTGGTAGAAATATATGAACGAAACGTTTATGTCATCCCCTAACCTAAAGAGG
AACAGACGTGAACGAATATATGATCAGAACATGTGTAAGAACACTTAAAACTCTGCTTCA
AATAAGAACAAGAGATGAAAACATGGAGACGGTACAAAAGCAGGCTCCAAAAGGCAAATA
ATAAGCCATGTTTACTTGCTTTGTTGATCTCATGTACTCCATGCTAGTTCTTAGACAAGG
TAAGGTGTTTTGGAGAACTCACCAGTTGATGCAGCCAAAGTGGAGGGCACCACCTGTAGC
AATTGAACAGGCACAGCCCTTTTGAAACGGTGAATCTCTGCACTAGATGACATGTTTTTT
GTTCTGTTAACTTCCAAGTCTTGCAAATGGAAATGCTTGTCGCGGTCGGCCAGCCGGCAA
GAAGGTCAAAGTCATCAGGTTACACGCCAAGAAAAGTAGTATTGTATTAAAAAATCCTGG
TTTAGAGAGTTAATTACGTTAGGAATTCAATTATATGATGTAAGGCGAATTTCCACTTAA
AATAGGGGCAGAACTTTCTGCATTGATGTATCACATCATCAATTTATGAGGATAGAAAAA
CTAAGACATATGAGACAGACAACTAGACAGCTACTTCGTCAAGAGTAAAGACAATCCTTC
TCATGGTCCTAGTAGGCACTTGGATTGAGGATCAAACCATGGCTTGTTAATTATAGATTA
GAAGTAACTTAATATTGGGCAAAGCATGGGCAAGATCAGATAAATGCACACCAACACGAG
CGGTTCACAATCTTTATTATTATTTGAATCATGAGATATTCGTAATATTCATCAGAATGT
AGATGTACTTCACTCTTGTGACACGTACACGACTTGTTTGCCCACATTTTTACCACTGAA
TAGACCAACAAAGGCAGCTAGCGCATTCTCTAGCCCAATGCTCACGTCTTCCACATATGC
AATCTTGCCATCCTTGTAATGCTTGGTCATGTAATCGAGGAACTGTGGGAATAAGTTGAT
GTAATCACTCTGGATGAAGCCCTTCATACTGATCCGTTTCGGCACCAGGCAAAAGAGGTT
GTGGATCCCTGCAGGATCAGTCATGCCGTGCTGGGAGACCATCCCACATACTGCTATGCG
ACCATGCATCCGCATGTTAAGGAGTACAGCATCTAGCATTGGTCCGCCTACATTCTCGAA
GTAGATGTCGATACCTTCAGGAAAGTACCTATGTATGGAAAGATTGCAGAACAAAGATAA
GATCATTTTGGTGCTATTCTCCCCGTTTACTGAGTTCAATAGAATTACTAATTTCACAAA
AACGGTAAGCAGATGATGACAAAAAATATCTGCCAAATGAACAATATGTTTGATTTGAGG
GCCCACATCATCCTAGAATTCATCCGACCATCATTAGATCACTCATGACTTTTGGTAGGA
TTGTCATATCCCTTAGTTTGTAGTCGTCTCCATGTTAATAAGAGATGATATGTGTTAGGC
TTGGACTTAGGACCAGGTGGTTCATTCACCATCTGGTTCAATAATCCTAAATGGGAAAGT
GTGCCTCATAATTCAGGTAGGTTCATTCTGTTAACATGGCTTTCAGATGTCATGTTCATT
ATAACCTAGCTTGATCCGTCTATGGTTTATGCAAGTTACCGTTGTATCTTTTTTTAGGTG
TTCTGTTGTATCCTATTGAAGGAGAAGGTCTGACCTTTTTAGTGCTGCAGTCAAGTCAGG
CTCCTCTTTGTAATTAAAAGCTGCATCGAATCCAAACTTATCTTTTAGGAGTTCAACCTG
AAACAATGTTGTAGACCCTGAATGATACAGCTAAACAGTTAACGAATGACATACTACAAG
TTGGATGAGTACTTTCTCATTTGTTCCAGCACTT