Contig Data
morexGenes
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Map Locations of contig_61636 (3210 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_61636

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72432 1 587 bp MLOC_72432.1 Available Available LOC_Os01g09720.1, FRAME:-2, EVALUE:1e-27, 13101.m01038 protein dof zinc finger domain containing protein, putative





CDS Structure of MLOC_72432






Contig Sequence (3210 bp)

>contig_61636 3210 assembly3_WGSMorex_rbca.fasta
GCCGCCGACGGGCACGTTGCGGAGCGCGCCCCCGCGGGTCCAGTAGCGGCGGCAGCCCTT
GCAGAAGTGGCGCGGCTGCGAGAGGTTGTAGTTGTTGTAGTAGCAGAACTTGGTGTCGGT
GGACTCGCAGCGCGGGCACGGCCACTGCGCCACCCTCTCCGGCTCCCCGACCCTCCTCGC
CCCGCCGGACGCCGCCGTGGGCGCCAACGCCCTGACCACCATCTCCTCCCCCTCCAGCTG
ATCCATGGCCGTAATGCAAACCATCGCTCCAAGAACGAAACCTGAACGACCTAATCAATC
GAGCTCTCGCTTGCTGGTAAGCTTGCAGGACGATCGAAGCCGCGGGACGGTTTGCCAATA
TGTAGCGGGGGGAGCAGGAAGAAGACAATGGAAGTGGTGGCCGGGTGGGGTGGCAGGGCG
AGCTGACAGGCAGAGGTCAGGGAGGAGGGGCAGTTTGAATAGGAGTAGGGGTTTGAGACT
TCTATTCCGGGGAAACGGACAAGGGCGCAGCAGCGGCGAGGGAAAAAGGCTGTGCTTTGT
CCCGGACGGCCGGTCCGTTGCTCGCCCTGCCGTGCCGACCGCCGGTGCTCACCCGCTCAG
AGAGACTCCAGTCAAAGACGAGAGAGGTGGCACTACTGCCATCTGGTTGCTGCTGCTGCT
GCTGCATGCAGCGGCTGGGCATCTTGCTGCAGCCCTGACCTATGTATCTGACCCTCCCTG
CGCCGTTTGATTCCCTCCCCTATCTATCTCTCTCTCTCTCTCTATCCTCTCTTCTGCGTG
GTTTGCTATGGCCTATGGGGACCGTGCATTGCCAAGCAGCCCGTAGGAGTATGCAGGACA
AATTAACGTTGAGCATTCCAGCACATACACGAAACATCTGGTTACTCCTTTTGTATGGTT
ATTTTTAACTCTACTCTTGTCTTCTTTAAAAAAAAAAATCCTCCCGGCGATGTATACGCT
TGTGTAAATTGCACATTCATGAATCTGCATGGTGAGTTTTTCTTCTTGACTGTTGGTGAA
CTTTCGTTGCAGCAGCACGGAGCGATGAATCTAGACCGATGTTGATTTGTACATGGGGCT
AGATCGGTGCTACTCGTAGCTGTAACTGTGTAGTAGCAACGCTAGCTCTGTTGACTATCA
AGAGTGGTGCAATGCAACGGTCTGCGTCAAACCGGTCAGGTCAGGTGAGTCACACGCTGC
GAAAATGCGCGACGCCTCCTCATGTTTTTTGCCGTCATAAAAAAGGAATCGAATAAGCAA
GGCTAGCTACGCACAGTAGGTTTTTATTATTTCCACACATCAGTCTATTCGATTTTATGC
CCCTGAAAAGTCGTGATTTTGATCGGTGAGCAGTTTCCTGGAGATGGTACGTATGACGAT
TGACGAGACAACCTAGCCTAGGATTGAAACGGTGGGTCACATGTTGCTAGCTGCTTCAGA
ATCAGACGTGTTCTCCACAGCCAGTCTAGACACGGAACGGACCGATCGGCCATCGCCATT
GCCTCATCGGTGCAAGACCTGCATCTGCATGCAGGCTCCGCAGATGGGATATGGATTGAA
GGCACAGCTGAAGGAAGGCGCTTCATGACCCCGTCGACACGCCAACAAATGGTCAAATCT
AAGTCCGATTGATGGAGGGAGTAGAGTAGGAGGCGTGTCGCAGCGGCAGGCCGGCAACGC
AACGCAACGCAGGGGCGAGCAAAACCCAGCAGGCACAGCCCGGCTGGCTGACAGCGTGGG
GACCCTGTGCAGGTACGTTACGTAGGACGTGATCAGTGCAGCTGTGCAGGGCGAGGACGG
GCAGCAGGCCAGCAGCAGGAGCTGGGCGGTGTGCGGAGGTGTCAGGCGGAGGCGGGGTTT
GTTTTGGACTGGGCAATGGCAACGGGCCGGCTGCAGCATGCACTGTTTGTCCCCTTGCGT
GCAACTGCGGTGCGGTACCGCTGCCCGCGCCTGCCACCGCCGCAGGAGGCCGACCCGAGC
ATGCACGACGAACGGCCTCCTCCTCTTCCCTTGCTTGCACTTGCAGGCCCGGATGGGTAC
CTCTCGGTCTCGGAGCATCTACAGTCGACCGGACAAGCAAACAATCTGTGGTCGAGTGAG
AATTTAATATTTTAAGGGAAATTTTAGGTGTAACGTTTTCCGACGGACAACCGGCCTAGC
TCGTTCGTCTCTGTACGCAAAGCGGGTCTTAAACGTTGTGTGGGCCGGCCATATTTGCAT
TTTTGCTTCATTGCATAAATCAACGTTGATTTTTTTTGCTATAATTGATATCACGCCGTG
CTATAACCAGTATTTCCAAATTAATACATAGGCTACGATGATGTTGGGATGAGGACGAAC
GTTTGTTGTCATGTATTTTTCCTGCATTGGTTTTGTTTTGCTGAAATCAGCAACCATTTT
TGCTATAATCGTAAGATTTTTTGCTTCAATCATGCTAATTTTTGCTACAACCGGCATAGC
AATTTGCTAGTACCGGCGCCTTGTTCTGCTACAAGACATAGGAGGCGTCGATTTTTTTTG
ACAACCATGATAGCTTTTGCTATAATCGGCACTTCGTTTTGCTAAAACGCATCTACAGTT
CGAGGACGACGACGCTGCTTCGACCAACACTTCCCTACTACAAGCATCGCTTGTGTTGCT
ATAATTTGCATCTCATTATTTTTGACATGGAAATGTCTCTATTCCATTAAACAACAGACG
CAGCGGCATCGGTGGCCACCAAATCACGTACAAAAGTAGGAGCTCCACCCGGCCATACGA
CCTGATGGTATATTCTAGGGCATATTGTAGGCTTTGTACCAATNNAGTTGATGCATTATT
TGGAGAAGAGGAACAATGGACATCAACAAATGCAGAGGAGAATGCAGCAAGTTTAGAGGA
GAATGAAGCAACTGAAGTAGCAGCTTGGTATGTGTGCAGCCTTTCCTTTTTTTGCATTTG
TTCTATTTTTATCAATGACTAAGCTTATTTCTGTTTGACCCAGCTCTAGGATAATTAGAG
GCACACGACAGAAAAGACCTAGAGAGGAAGAAACTTTGGTTGAACCATCATCTGATGCAG
AATTTGAAACCATGGCTTATGTAGGTTTTGAAGCTATAAGAGAGGAGGAAGTTATTTTAT
CTGAAGTTTCTTTAAGGATTAGTGAACCCACAGATGACCGTCAACTGGTCATCACTTCCA
AGTGAGTCAAAGCTCAACAAAATCGCCACC