morexGenes - Barley RNA-seq Database

Contig contig_61591

Source Contig contig_61591

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_61591 (6955 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_61591

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_72410	7	696 bp	MLOC_72410.1	Available	Available	LOC_Os03g61810.1, FRAME:+3, EVALUE:2e-79, 13103.m06812 protein tRNA-specific adenosine deaminase, putative, expressed
MLOC_72411	1	246 bp	AK368118	Not available	Available	None
MLOC_72409	1	128 bp	MLOC_72409.1	Available	Available	None

CDS Structure of MLOC_72410

CDS Structure of MLOC_72411

CDS Structure of MLOC_72409

Contig Sequence (6955 bp)

>contig_61591 6955 assembly3_WGSMorex_rbca.fasta
CGACCACCACCGACCACGTCCAAAAACCCTAAATCCTGCACGAAACGAAATCTCCTGATC
GGTCAGCCCTAAGATCCACCACGCCGCGAAGCCCCAACCCCAGCCCGATCCCTCCCCTCG
ACCTAGCTCATGGCTCCCAAACCCAGAGAGCACGAGAAAATTACCGAATCTGAACGGAGA
TTCAGCGCCGGAGCCGCCTCTGCTCCGATCCGGGGCGATGGGGCCGACGCGCTCGTGCCA
GGACGAGAGAGGGGGCGGTAGGGAGCGCCGTCAGGCATGGGAGATCGGGGATGGTGCGCT
CGAGGAGGATCCCGTGGGGAGGCGCAAAGAGACGGCGGTTTGGGCCGAGAGAGACGGCGA
GGGGCGGGGGCGAGTTGCGACCTGTGAGCGACACGGGGGCGAGCGCCGAGCGGCAGGGGC
GAGCGGGAGCGGTTCCGTGCGTATCGATAGCGAGTGGGGGGTTTCGTCATTAGCGATGGT
ATTAGCGGGGGTTTCGTTAGCGAGCGATTTGTTTCATTAACAGTGAAATTAAACCGTTGA
TGATACAATTAAACGGTTGAGATCGCGAGTTGGATCTGCCTTCTCGTGCTTTTATTAGTA
GAGAAAAGGAAATGAGGGGTTGCTCGTTCTTGACGACATTGTTGGCCCTTGAGGCATGGA
GACTTGAAGCTCCACGCTCCATTCTTTGATGGACGTTGCGTCTGAGCGTCCATCTGAAAT
ATACTCAAAGTCCACGTGCATACATATTGTGCTCGACATTCTAGAAAAACTCTGAATATT
TTCATTTCCTCTCACTACATGCGTCAATATCCAACCAATCAGACGAACCGACGCATTGCA
TTGCTACATGAAAGGCATGCCCATCAACATAGCAAAAGAAAAAGAAAAATGGAAAAGAAG
GATCACAGCCTCCAACCTCTGCATCAATCAATACATGCGGTCATTTTATTAAACAACTAA
CAGAACAATGTTTTGGGTTCACAAGTAGCAAACAAAGTTGGAAAATAAATAAGTTTCAAA
ACAGATAGAAACTGCCACATCCGGCGAGATCAAAAAAATAGACTACGATGCCTATACACC
TAGTCTATTATTAGCTCGCCATCCAAACCGGCTGAAGATAGCCCGTGCGACTGTCTCTCA
CCGGTTGCACCCAATAGCCATAAACTTCCTGGATTCCGCATGGTTGAGTAACGACTACGT
ATGAATCCAAGTTGTAGCTCAGTAAATAACCTGTAAAAATTTATGGATGCTTTTGCCATT
AAAAATCAGATCGTTTCTAGTGTTTCATATAGGCCAATATAGCGCACTTATTACAATCCC
GATATGATTCGTTATAGTTCCCTCTACTCCATTGAGCCACATCTCAAATAGTGTATTAAT
GCTCGTTGGTTGATTAATATTGCGTCATAAAAAATTTGCCAGAGGACAATGAAGAAAGAG
GTGTTTAATTGTTTCATTTGATCACAATAGTAACATTTAGGACTGCCTATCCATCTTTAT
TTTATCAAATTATCTTTTGTTAATACAAACCCCTTGTATATAAACCACATGAAAAATTAA
TTCTGAACGTCACCTTAATCTTCCAAATATGTAAAGATCTCGAAATGGGCCCGGATTTAA
TTAGATCCATGTACATCGATTTCACCGAAAATCTACCATTCATAGCTAATTTCCAGTGGA
TGGAATCTACCTGGTCCGAGATTTGAACATCCATCAAACGTCTGATCAAGTGCATCCACG
CATTCCATCGTTCTCCCACTACAGCTTCCCTGAATTGGATATTGAGAGGTATTGACTGAA
ATAATGTAGCAACGTAATTTTTCTTACGTTGTGCAATATTATATAGGGTAGGATATTGTA
AAGCTAGCGTCGTATTCCCCAGCAATGTGTCCTCCCAGAATCTGGTCATGGTTCCATTGA
CAACTAAAAACTTCACCCTCTGGAAAAACCTTCACCATCATTAACCCCTTCCAAAAAGAA
GAGTCATTAGGCCGAGCAGTAACCTGAGCCAAAGACTTAGAATGTAGGTATTTATTCCTC
AAAATTTGTATCCACATCCCTTCGGTCTCAGTAGACAACCTGTATAGCCATTTGCTAAGC
AGGCATCTATTTTTAACTTCTGAATTCTCAATGCCTAGGCCCCCTTGGTCTTTGGGTCTG
CAAATAATATCCCACTTTGCTAATCTATATTTCTTCTTAGTCTCATCGCATTGCCAGAAG
AAACAAGGTCGATAAAAATCTAATCTTTTTCGTACACCCACCCATACTTCAAAAAAGATA
GAAGAAACATCGACAGGCTTGACAACACCGAGTTTATCAACACCAACCTTCCTCCATAGG
ACATCTGCTTGCCCTTCCAGCAGCTTAGTCACATAGCATAAGAAATAGTGAAGGATAAAG
AGGAATATCAAAGATTGTACTAGCAATCATCAACGTGCAATGTACGTGATATTAGGTAGG
ATACTAAAGACACGTTGATTACGTGAGTAGAGTTGACATTGACATTAGGTAAGATACAGA
AACATGTTGAGTTCCCAGCATTGGAGAGATCTAGGTCGTTGGCTTGAGATGGGTGATGGT
GAGGATTAGTTGGCTTGAGGCACTTTGTGTCATTTATATCGACAGATGTAGATGTAGATA
TATGGTAGTGGCATGTCCCTATCAAAATTGATTTATGATAGAACCAATAACAAAATATTT
AGACCAACTGTAGCGGAGTCTTCATAATATTGATCACCATCCACCATATGGAGATCGCTT
CATAATAATTGTACTCTCCAATTTTTTCTTACATGTAGGTCCTTTTTGTCATTTACTACA
AATTTCTTCCCTAATTATCCACGTAGGTCTTTTAAGTAGAGTATTTGAGATAACCAAATG
TGCAGGACACAAAGAAGTTGTTGGCTATTGAAGAGGCCAGAGGGTTCTCGAGAATGCTCA
GACCAATTGATTGCAATCATTGGCAGTGAAAGAACTTTCCCAAAGGTTTGCGAGTAATGC
ATCAAGGTCACACCACAGAGGTCACCATCATACTAGAAGCGGTGGCATCACATGGCTTAT
GGATTTGACATGCTTTCTTTGAAATGTCGGGTTCCCACAACGACATCAACATGCTTCAAC
GATCTCCATTGTTTAGGAGGCTTTGCAATGGGGAATCACCGTCGTGCAATTGCACCGTCA
ACGGTCAAGGCTATAATATGGGATAGTATCTTGTTAATGGCATATATCCTCAGTGGATTG
CATTTGTAAAGACTATATCCGAACCACATGGCAACAAACAAAATCATTTCGCAACAATGC
AGGAAGCAGCTAGGAAGGATGTGGAGAGGGGCATTCAGAGTGTTGCAAGCGGTTGGGGAA
TTGTCAGTGGGGCTCGAGTGATGTGGGAATCAAAAACTTTATGACAGCTGATAACATGTT
GTGTTATTTTAGACAATAGGATCGTCGAGGATGAGGGTGATGGTGTAACTCAAGCCAATG
ATTTTAAAGCTCGTGGAGAACAAGTGGAAATACCGTAAGATCAAGATGCAGATCGGCTTA
TCAACTTTTTGCGGATGCGTCAGAATCTTCAAGATCATTAGGTGCACGCGCAACTACTCA
ATGATCTGGTGGAGCATATGTGGATCCACAATGAAAATCAAAGAGACGATTGATCACTCC
TTATGTTCAGCACCAACATTTGGTATTTACGTGTGACATTAGTTTGTGTGATCGACGTGT
GTGTTTCTGCATGGATTTAAAAGTCTGAATATAAGATATGTGAATGCGGGAGTGAAATAT
GAGGGATCGTCCAGATTCGCTCCCGACACGTCTGCGGACGTATAGGCGAAGGATTTGCCC
AGTCTGGCTGTAGATGCTCTTAGGAGCTTGCATAGTCAAACCCAAAAAGATTGTTTTATC
ATGCGGCTGGATAATCGATAAAATCTTGAAAGTCCTATTCTACTCCCGAGTTCAAATGCT
CCCCCGTCAACAATAAAATCAAAAATATAGAAAAAAATTCAAAAAAATCTAATATTTTTT
GGTAAACTTCAACGATCTAGAAAGTATTTAAAAGTAGCATTTTTGAAGCATCATTTTTTT
ACACGACTTTCACAAATGTTATTTCGAGCTGGAATTTTACAATCATACAAAACATTTGTC
AAAGTTTATCAAAAAAAATTCAAGACTTTTTGAATTTTATAATTTTAGTATTTATGAGGA
AGCATATGAGCTCGGGAGAAGAAAAGAAACTCCATGTCGATGAAATCTACACGTCGTTGG
TGTGAGAATCTATCTGTACTGCTGTACTAGCGCTGATGTGGACCGGTGCTTCGTCAGCCG
AGCGACGACCAAACACCAGTCCCGCAGGGTCTCCCCTTTCCTTTCCTCCCCCCGTTAATT
CCCACGGACGGACGGGCAAGACCCACAGTAGGCATCTCGTCGCTCACTCCGCCGCCGCCG
CCGCTCCGCTCCTCCTCCTACCTCGCCAATCGCCATGGAGGAAGCCAAGGGTACGCTCTG
CCGCCGTGCATCAGTTATTACCTCGCGGGTCAGATTGTTCGGTGCCCTGCTCAGTTCAGC
GCTGCAAGTTCAACTGTCCAAGGGGCCGGATTTGGAATTAGAAGCGTAACAAGTCACGGC
CGGTCCTGCGTTTCTTAAATCTGCGTTTGTGAAATTAGAGCAGAGGAGGCGGCCATGTAC
GAGGACTGAAAAAACTTGTCTGTGTTGCTGAGTGCGGTCAGTCTTCCATTGTCCCGTCCT
GCAACAATCTTTCCGAGTTCATGGGGATCTTGTTTGTTTACCTGTGCTAATTTCTCTCTA
CATCCCTTAAGTTGTACTACTGCCTAGGTGCTTTATTTCATTTTATTTTATTATTATTAT
TCTACCTTTTAACATCTTTGTTAATTGGAGAAACGCCCTTTCTTAAAGAAAAGACTGACT
TGCTTATGCTTTGCTTCTTTGAGCAGCTGCACATGATAGGGAGCACAAGTTCTTGTCGAT
AGCGGTGGAAGAAGCCTACCGAGCAGTCGACCGCGGCCATGGACGCCCATTTGGCGCAGT
CGTGGTCCGCAACGACAAAGTGGTGGTCAGTTGCCATAACATGGTTGTGAAGAACACCGA
TGCAACCGCCCATGCCGAAGTAACTGCAATAAGAGAGGTGATTGAGGTGCTCTGTGGACA
GAGGCTATGCTCACCAGCTACTTGGTGCTCTGCTTACTGTCTACTCCCTCCGTTCCTAAA
TANNAGTCTTTTTAGAGATTTCATTAAAAGACTACATACAGAGCAAAATGAATGAATCTA
TATTCTAAAGCATGTCTATATACATCCGTATGTAGTCTTTTTAGTGAAACCTCTTAAAAG
ANNNNNNTTTAGAAACGGAGGGAGTACATTTTTGGTTACTCAGTATGTTCTTGTACTTCA
TTTCCAATGTTTGGTCGTTTGTATCAAAATAACCGGTGTCTTGCTCTCACTCTAGGCTTG
CAAGAAGCTCGGCAAGACCGACTTGTCGGACTGCGAAATGTATGCTTCCTGCGAACCTTG
CCCGATGTGTTTTGGCGCTGTCCGTCTGTCCCGGATCAAGGTTCGCCCCTTGCTCCAGCA
TTCTTCGTCTGGTAGAATGTATATTGCTTAATTTGTTGATCGACAATCAATTAATCATGG
TGAATGCTGCAATGCAGAGGCTTGTGTATGGAGCCACGGCAGAAGCTGCTATTGCCATGG
GAAGCTGCTACCAGAATGCTAACCTGGAGATAAAGCGAGCAGATGGGAACGAAGCCCTGC
TTGCTGAACAAGTGTTTGAGAACACCAAGGGGAAATTTCAAATGTACTAACAGTGTGTAG
ATATAGACGGCATTGATGCGAGTTCACATCACGGAGGTCTTTGATGCTTGGAAACAATAA
TGCAATTGTCAAAAGATATGCCATTGCTGATGAACTACAAACTGTCAAATAGCATATATA
ACATGTGATTATGGTCTGATCTTACTTAATTCTCAGGTACAACTTGAGGATACTTACTAA
CATGAACATGTACAAAAAAAATCAGATCTACAGCTATTCTGTTTTGCATGAAAACTGTCA
AACACGCTTTGGGAGCGTGGAGTTTTTATTCCCATATTCTAGTGTAGCCTCTACCTAGAT
AATTCAGTTTGCGTCATGATTTGTGTTATCCTTATTTGTTTCTTCCAAACAAGAGAACAT
TTGACCTTGAAACTTTGCAGATCAACTAAACACAAGTGTCACTTATTGTATAAAATGTTT
CCGATTTTTTTATAACACATAAATTTTTCAATTTTTGAATGAATTCGATCATTTTAGAAA
AAAACATGCTGCACCAAAAAAATCCGAAAATCTTTCTAAACATGATAGTAATTGTGTGAT
GTTGATCTACGAAGTTTCGAGTTCTAATGTTCTTTTATTTGGACCATAAATTTCCCTTGG
ATACTAACATGAGCATGTAAAAGAAATCAGAATTATTGAAATTTGTTTGATATTGTTTTG
AATTTACGGTTCACCCCATGAGGATATGCTCATCAGAGCTAATACATCGGACCGGGTAGG
GAGTCTCACAACGATGAGCCAGGCGCCCGCGGTTCCCAAGGAGGGGACGGGGTAGGCCGA
CAGTGATGGGCCATGTACCCCCTCCCCGTGGTGCGAGAGGATGCCTTGCTCATGTTGATG
GAGGAAGAGTTGCTCCGTTGTGTCAAGCTCGTGCGCCATCAAGGCCTCCTCAGCATGAAG
AGCGAAGGTTGTAGGACAACAACAACGAGCGAGAGCCCCCCCCTTTCCCGAGGTTGCGTT
GATAGCGTCCGTCACACCGAGCGTGCTTGTCGTGAAGGCCTTCCCCGCCACCAATGGCGT
TTGTGCCGCCTATCAGGTTCCAATTTTGTCCGAAACAAACATGAGAGAGAGAGAGAGAGA
GAGAGATGGGGAAGAGGGAGGGAGGGAGAGAGAGAGGGGGAGGGGGTGAGAAGGA