Contig Data
morexGenes
Links



Map Locations of contig_61499 (4791 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_61499

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72359 1 339 bp MLOC_72359.1 Available Available LOC_Os07g44170.1, FRAME:+3, EVALUE:1e-25, 13107.m04646 protein pentatricopeptide repeat domain containing protein, putative
MLOC_72360 1 730 bp AK250721.1 Not available Available None





CDS Structure of MLOC_72359






CDS Structure of MLOC_72360






Contig Sequence (4791 bp)

>contig_61499 4791 assembly3_WGSMorex_rbca.fasta
CAGGGTTAAAACCAAATTCCAATACCATGGCAAGTATACTTCCGAGTCTTTCTGGCCTGA
AATTGTTCAGGCATGGAAAAGAGGTCCATGGCTTCTCCTTAAGATATGGACTTGACCAGA
GCAAGTTTCTAGGGAGCGCATTTATTGACTTCTACAGTAGACAAGGATTCCTAAGGGAGG
CAGCAACTGTATTTGAGCTCATTCCAAAGAAAGATTTGGTTATATGGAATTCAGTGGTTG
CAGGTATGGCATGAATGGGGATACAGATTCTGCACTGTGTGCATTTAGGGCGCTACAGAA
AGCAGGATTTAAACCTGATCATGGTTCTGGAGCTTGTTCGCCACAGACGCGGCAAATAGA
TCACGCGATACATAGACCAGGCATCTAAATGTTGTTTCTCTGCTCGCAAGGCTCAGCATA
CTACAAAGCATGCCTGTGCTTAAATCTCTTCATCTGTTGCTGTCATACAGCAGCGACAAT
GTTTCCATCAAAGAGTGCCAAAAGCGGAAAGAATAAAGTGGATTATGTAAAGCATTCAGA
TTTCTCTTCTGATTCAAGGTACGAATACATGCACAAGGATAGTCAATCGGTGGAATTGTT
AATCCTGGTCTGAATGCCACAGTACGTAGTTTGTTTTCTGTTCTGCAGTGGTATATGTTG
TGGTCGGGGTGAGCTGGGTGGCTGGGTTGATGGTGGTTTTAGCATATGGGTCGGTTGATG
CCCTACACAAACTGAACTAGCCAAGACCTGCCTGTAAACTGGTACTGCTAAAAGCAACGC
CACTTCTTTCTCTCAGTCCTGCAGGCAAGGCATCTACCCCTAAGACTTTTGGGTTAGAGA
ACACGTGAACAGAAATGTGGAAGCACATGTTAGTTTAGTCTTAACTGAAATCTTAACTGA
ATTTTGAAATGAATTTTTAACAGAAGTCTTAACTGAATTATTAACTGAATGTTTAGTTTA
GTCTGAGCATTAGTAGTACATATGCTGCTGCTGTTTGCAGTATTAAAAAACTGAATTTTT
AACTGAATTCTTAACTCTGTTGATGCAGTGTGTGATTCATTGTTGGGAAAAACTGTAGAC
ACATTCAGGTGTTTCCCCCCTGTTGACGGTGGCTGAATAATTAGGCAGAACCGGAGGGAG
CTACATGCAAAGTGTCACGAGCTGGCCCGCCCTGTCCAGTTGGCGCGTTGCTATTGGCCG
GTGGTGAGTTTGGACTGGGTTTGCACATTGCCTGCAAGTTCTGGGAGCGGGTAGGGTCAT
TTTTCAACTTTTAGGACTCAACCATCACATTCGGTGCAAGTTCTAGGACCCCTGGTCCTG
TTACCTAACTTGCCTAAAAATTCAGTTAATAAGGAATATGACTGGGAAATGCACAAGTAG
ACGACAGTAAAAAAGTGTATTGATGAACATGTAACAACTGTTCATATTACAAGTTAGAAT
GGCATTTTTCTAGGAAATAAACGCCATCAAAAAGGATGGGAATAGTCAAATGATGTGATC
TTCCAAACTAGAATCTTCACCATAAATCGAACATGAGATCTTTTCAGTGCCTAGTGACTA
CTCCCATAATAGCAGACCAAATCACATAGTGCGGGGCCGAAAAGGTGCAATAGACACAAT
TTTTAGGAGTCATGATCTCATACCTCCATCAGATTCATTTGACTGGTTTGATGTTTGTGA
CTGCCGCTTTCGCTTTACTCTGCATGTCAGGAGTGCGTCAATGGTATGCCTTTCATCTGG
TATACAGCTGCCAAAAGAAAATTAAGTTGGCCATAATGAGTGTAGTGAATTGATATGAGA
ACAGTGTCGCTATTATACTGATAATACACCAGAATACAAAAAACTGTGGACAACAAATTC
AAAGTCTTCTGTTTAAAGCACAAACCTTGAAGCTAGAACAGGTTTTGGATTGCCACACAA
TTCTTTCAAAGAAGAAAGGAGGCGTGACTGAGACATGTATAAAGCTGCATCGAGGCCAGG
AACATAGAGAAGGACAACTTTTGTGATAAGAGGCTTGTTCTGAACACCAAAGAAAACATA
GTTTTAGAGCTAAGCACAGGTAGGGATTCTAAAGCAGCAAATAGAACTCACGGAAGTCAC
ATTACGTGTACATATCGATGCTTACTGCAAATCGGCATCTATAATTCACTTATTGTCATC
ACGAGTTGCCAGTAATTATTATTCTATGATTTTCACTAGGTTAAAAAATGCTGCAAATGT
TTTTGAGATACTCCCTCTGTAAACAAATGTAAGACGTTTTAGGTCACCAGGTCGACCTAA
AATGTGACCTAGTGACCTAAAACGTCTTACATTTGTTTACAGAGGGAATACTTTTGTAAT
TACTCCCTCTGTCGACTAATATAAGAGCGTTTAGGTCACTGTAGTGATCTAAACGATCTT
ATATTAGTTGACAGAGGGAATACAAAACAGGTTGTTCTCAGTCCAAAGTGCAGTTATGAA
AATTATGGAACAGAAAAACTTGGTTATTCTTCATTGATAATGACTAAAACAGTGGGGAAA
AAAAGAAAATCATGTTCTCCACAAAGTAAGAAGGGAAAGGGAACATGATTTACTTTAACA
AACACCCATGAAGGCGGCATGCCTTCACCAATAACCCAAGTTACTAGCCCCTGGACATCC
TGTGTTACAACCAAATGGTGTGTTAAAACAAAGAAAGAAAAGTCAGTGGTCAATTTGCAT
CGTGTTTTTGCTATGGAAGGACCTGCAAATTCAATGTGGAATCTGACGTGGCCTCCTTAA
AAATAACATCAGGTTTAGCCTGGATAGAATGCAGAAAAAAGAAAGAGACAAGAATTAGTT
CTGTAAGAAATAAGGCATAGCTTCGAGTAGCAAATGTATTAATCAGTAAAGTAAGCAGCA
CGAGAGTACTCTGACCAACTAACAAATAAGCAAATATCCACATGTCCAACTAGACACACA
TCTGTGATAAAATTGTTGAATATAACCAATACTTACATGCTTCTTCACCTAATAGTCCAT
TTATACCATGTAGACGTAATTCAAAAAGTTGATCACAGAGAAAACATAGAAGGTTTCTAG
TGTTCAGAGAAAACTCTGATAACAAAATAAACGACGTATTCATCGAATTCTAGGTGGGGC
GACTTCCTTTTATTTGATGGAAGAAACACTCTTCTGCCCAACAAGGAATTAGTCTAGGTT
TTTGCCTCACAGAAGTTCAGTGGAAAAATCCAATATCTCTGTCGCATTTGTACCATATAC
CTATAGGTAACCACATTTCAACCCTTTAAAAAATCTCTCCCAGAATATGGAGTGAGGCCT
CATACATATTTTGGCTCAGCTCCACTAGCAAAAGTCACCCACAAATGCCATCTTCACCAT
GAGTCACCATAAAATTAAATGATAAGTGTAATGTTGCAATGACACGACCCTCTATTCCAA
CAAACTAAAACTCCAAAACTTATTTTGGGGTTTCCTAGCAGCAGACTAACACAGCTCCAG
GTGGTTATAAACTTCCATGGTTCTGCCTCTCTGAAACAGTGAAGAGAAAAGGGCGGCAAT
AAAGCACGTACGTCGGGACCGAAGACGTCGTAGTACGTAGAGGCAGCGGGGGCGGCTCCG
TCGGAGGGCGTCGACATGTCGGGCGCCGCCGAGGGGGCGAATCTAGAAGTTCTGCCGGGT
GCGCACCTGCACGGCCAGAACTTGTGAAGGTCAGTGGGACTTAACTAATCGCTGGATGGG
GAAAAAATACTCATACCTCAAAACTCAACTGCGGACGGGGTGGAGACGGCAGGAACGCGA
TGTCCCGACGAGGAAGAACGGGAGCGGCGATGGCGGCAGCGCGCGTGAGAGGCCGTGGTG
GGTGGGGGCGAGGGGCATGAGGGGTGGGATTGAGGCGCCGGCGGTGACGCCGCTAAGGGA
CGGCACGGCGGCAGCTGTAGGGCTTGGTGGTAGAACAGGGGACAGGAATTTAGGGCGCGT
TTGGATCCCTATCGAGTTCGATCGTGGGCCTTCCTGGGCTGGGGAATTTGAGGATTTGCC
ACAGGTTTGTTTGTACTGGGCACCGCTAGGCATCATATTACATATGTTTGCTACCTATAT
CAGACTAGTAGAAGACCGTCCGATCAGATGCAGGTAAGTCATCCGATCAGATGGTCAGTA
ACCCACGAGATTTGTTGGGTTCGCTCATTAATAGGCCAGCATTAAATTTTTTTGGCAGCA
ACTAATATCTTGAAAAATAAAATTGTCCTTCCATTATTGCTTCTCCGTTGGAAAATAAAC
CATGCTTTCATAGTATTATTATTGAGTTTATGTCGAAAATAATATTTGATTCAAATATGT
TTCTGTCCGAATAATTTTTTTGCTTCCACCCAAAATAAGATTTGTTTCTATCTAACAAAA
ATTGCATCCAATATATTTGCTTCCAATGTGTTTCGGTCAAATACAAATTTTGCTTCCACC
CAAAACGTGATTTGTTTCTACTATCTAACAAAAAAATGCATCCAGTGTATTTGCTTCCAA
TGTGTTTCTGTCTTATAAAACAATTGCTTCCGCGCAAGATGAGATTTGTTTCTATCCAAC
AAAAAATTGCATCCAGTGTCAAGCTAATTTTTTTACAATGATGCAAAAGTTTATTCAAGT
CTACTCGAATCCAATGGCCCATATATTTGTTTCGGTTAAACATAAAAAATGCTACTTTTC
CATTTGATTATTACATATGTTTCCAAGGTAATGGAAATTACAATTCAGAGTGCGCCTTAT
CGAGTTCAAGCAACATCTTGCCCAACTTCTTTTTGGCTGCCTTCACTCCCC