Contig Data
morexGenes
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Map Locations of contig_6149 (4246 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_6149

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72354 3 1143 bp AK377032 Available Available None
MLOC_72355 1 329 bp MLOC_72355.1 Available Available None





CDS Structure of MLOC_72354






CDS Structure of MLOC_72355






Contig Sequence (4246 bp)

>contig_6149 4246 assembly3_WGSMorex_rbca.fasta
AGAACTACGTGCATGCCCTATACACTCGGACGGGCATGCCCTATACACTCGGACGGAGGG
AGTACTAGCTCTAATACAAATTTATACTAAGCTTGAGACAGTTANTTTGGGACGGAGGGA
GTAGTTAATTATTTTGTTTCAAGATATCGTATCATGTGAAAAGAAAAGGCTCTTATTAAG
GTTTCCAAACCCTCGCAAAATTCTCAGAAACGTTGTACTGCTAAGGAATTGTGTGACGTG
CACCCATACAAATGGGATTTCAACAAGCCAATCTTGTGTTTTACCATTGAAAAACAATCC
GAAACACTGCAATCGCCAAGCTCCTTCGCTGATGAGTGTACCGGTTGTCAAGCAGGAACA
GCTACGCCTTCTTGCTTCTGGTATATTTTACTCCACTAGATTCCGATTTAATCTAATCTC
CACTTGATTTGTCCTCGGGCTCTTCGGACGGACCACCCTCCGTAACACCAACTTCCGCAG
GACGGAGCACGCGATCATGTAACATGTACCCCACCTGAAACCACAAAAATGTGCAGTGAG
TACTACTACTACTACCACCATATATGGAGTTAACGAGAGACTGGAAGGATACCCATACAA
CATTGTTGCCAAGATAGTGATATATTTAAAGCAGGGAAGATAGCAAAAATCAAAGAGCTA
AGCACCATTAACTACCACATGTAGTTTATTTTTTGAATTTTTATGTAATTAGACATTACT
CTCAGAAGTGATTCTCCTTCTAAATGCTCTTCCATGGAGATATAACACGATAATTCTTAC
TGTGTCAAAACAGCCAAAATATGTGGAGGGGGGCGGTACATGTGTCACATTCACGTATAA
TAAATCTGGATTTGAAAATTTTACAAAGCAAAGCCAGTAAATGGGCCAGGTGTATTCAAG
CATCCACTATTCTTTACGCTTGTTCTACAAATCAAAATATTCTGATTTGCTGTTTATTGT
TTATTCCATATATATACATTTTCCATCGAAGTTACCTATAACGCCCTGTTTGGATTGTCG
TTTTGCATCTAAATACGCTGGTAAGAAAAATACGGATGTTCATCCGCCATTTCACTTTTC
GTCTAGAAATAGCTGGGATCCCGTAAGTTACATCTGTATTTTTAATACACTTGTATATAA
TACCGTGGAGAAACGCTGAACCAAACACGGCCTAAGCATGACCATCTGTGTATTCACAAT
CTTTTTTTATTTTTATTGTGCTGTGCAGATATTAAGGGCTGCCTGGAGCTAGGCCACAAC
TGGCTTTTTTCGTTTTATGCTCTTTCTTACTTCGACATGGTTTATGAACGCGGCTACATA
TAAAGAAATGATTAAGATCGTATTTGCAAGAAAACATTTATTGACCCATTTACTAATATC
ACACATTTGATTCAGAAAAGTGGAGGAAAATCGTATGAATACAAATTTCCCTATGCTAAC
ATCACATCCTTTGAATTGAATTTCATAAAACATAAAGAAATTTTACCATCCACCCAAAAA
AAATACATTTCTATGAATGGCCAAAACAATTTTTTACAGTTCTTACTTCATTTTATCTCT
GCATGTGCTTTGACCTACAATGAATACAAAAGAGCATGTTTCTAGATGGTAGGACCAGTG
TGGCTGTACAAACATAAAATTATAAGACCATATGTCCGTAAAACAAGCCTAAAGAATACA
GAACTGCCAATCAACAAATTATAGATGAATACAGGAATAGATCAAACTCAAGAACTCTAA
GAACCGACATTGTTAGATTTAATAGGACAGGGACAAGCATATATATCAGAATCTTGATGA
TGATACATACCTTCACAACAGAAGCAACAGTTCCGGATGGTTTTGAAGGATCAGGAATTT
GGAAAAGTGCAAAATGCTTATCAGGATCAAATTTCTCATTCATTGGATCAAACTTTTCGA
CTCCAAACTTCTTAAAAACCTGTTCAAAATTGAGGAAAATCTCAAATTAGGCAATATTAT
CACCCAAAGAGCAATGTGCAAAAGGAGAAGAAATAGTTAAAAAACACTCATGAAAAGTAG
GACAAAATTCAGGTACAGAAAAGCTACAATAGCAGGAACAAATCATATTCTGATGAATAA
CATGCACTACACAGAAAAAGTACCTCTCCAAGTTGCTTATCAGTCATGTCTACACCCTCC
AGTAGGGTTTTTAGTAACGGTACAGCTCCACTAGAATCTTCAGATGTATCTAATTTTGAG
AAGCTTTCCTTTACAACAGATGAAGCTCTAGCCAAATTGTCAGCAACATCTAACAAGCTC
TTGGAGAAGTTCTGCAAACACGATTAAGACACTGTAAGAAATAGCAAATTCAAAATAGCT
AATCAAAATGCTTAGAAATATCATCTATGCCATTAAAAGTTCAAACCAGAAATCAGATGT
AACAACATCACACCTGTACTGCATATTTTTTTGAGTTCTCAGATTCACGCTTTGTCCGGG
CAATGACATTTTCCATTTCTGCATAGCTGCGCAAAACCTTGTCCTTCATATCTTTGACCT
CTTCATCTTTCAAGGTCAATAATTCATCCTTCTCAAAAACTAGCTTCACTAGATCCTCCT
TTGACAGATCAAGGTCTTCTGTACCTGAACCAGAAAATGCAGGTCATTCAGTTCATCACC
TCCTGATAGACTGGGACTGAAGTCTTTCAAACCTACTTCCAGACGAACCACTGTCTTCCT
TTGAAGCTTCACCATTTGATTCATGTGCAGTACTTTCCTGGTCTTTGGCTTCGTGTACCT
CCTTATCATTTTGTTGAGGAGTAGAAGATGAAAAGCCAAACCTTTGAAAGATGTTGCTTG
AGTATCTCAAGGGCTGATTCAACATATATGGTACCTGCTTGTCAGAGAGTATATACAGCT
CGTATAAGTGAATAGATAGTAGAAACAGAAACAGCCCAAAGACAGAAGATTACTATTGGC
AATTCAGGTATTATCTAAACCAAATTAACAGTCTCCCGTTAAGTGTAAGTAATAAAGAGA
TCTTGTGACACAGACAGTTTAGGGGTCGATATGATAGATGTTAGTACTATGTGGAAGAAG
ACTTCAAGAAGTGAAAGTCGATCAATAAATTAAACATATGTAGATAGTCCAACATGAATT
CTGAGAACAAAACCATCACAACATGTGTAGTCTAAAGATTAGGATATAGACTAGCTGTAA
GAAAAAAGGATTTCGATGATTCATAATGAGAAGGAAGGAGAAACCAGGCTGATGCAGAGG
TTCATGCAGTGAAGGTCAGAGTAAACAGCCTGAAAGATGCTCTACCAAGATATAAGAACG
CCAGTATACATAGCCACATGCTGAGATCTCTGGCAGATGCTTGAGATCAGGGCAGATTAA
ATTTGTTTGTGGTAGATGCTGCATATTTACATCAGCCTAGTTTCTTATTCCCATCTTGCA
ACCACTGTTTTTCAGTCGAACGACTGGTCGTCGAGTCGTAACCGAAGGTCGACTCAAACA
TGTCAGACTCGAATAATTGGCAGAGTCAAGCGACACAATATGCAGATCATCATGTCCTTA
CAAGGAAGCACATCATATTACTGCAGGCATAAGTACAAGTAAATGATAAACTGGAATTCT
GGAATCTATATTTCCAAAAAAAAAAAAAAAAACTGCCCATTCCAATAGTAGGAAGTTAGT
CCCTTGCAGGAAAATCCCCAACTCTGTCGATATTCAAATAACAATTCTGACAACATCCAA
AACCCAAACATCCAAGGGTTTTATGGTCCAACACTAGGAAACACAACTCATAAACCATCG
TATCTAAAATCCCAAAACTGCCTACACTTGATTCCTCCGTCGAAACCTAGACTTAGCATG
ATGTTATGACGAATCCAAAATCAAACCTCCGTTTGAAGCAAAACCATAGACTCCACCAGC
CATCGCCAGGAGTAAATCCCTGAACTCCCCCGACCAGAAACCACGGACGAAGAATAATCT
ACCGCCGAAAACATCGAGCATGGACGGCACTCCTCCACATCCTAAAATCTCTACGAATCC
CCTACGAGATGCGACCCAAAAACACTCGAGGAACATCAAGGTTCAAACCAACCGGCCGTA
GAAAATCTCACCCTGGCGGGGCCGAAGGAAGAGACGAACGGGCGAGCGGCGGCCACCGCC
ACGCCGCCGAGCGGCCGCCCAGCAGCGGCGGCCCCCACCGCAGCGGCGCGTCCCGGCCGA
GCGCGTGCGCACGCGCCGGCACGGCGGGCCTCCCAGCACACGCGCA