Map Locations of contig_61451 (7244 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_61451

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72334 2 2432 bp AK376662 Available Available None





CDS Structure of MLOC_72334






Contig Sequence (7244 bp)

>contig_61451 7244 assembly3_WGSMorex_rbca.fasta
ATCGACAGCCTGCCCCTCATCGTCCCCGACAACCTCCTGCTGGTCTATTATGACTACCTG
CATCTGATGGAAATTTGCATTTTTAACTTTAACATAGATGTTTAATAAAATCGGATATAA
AAACTGGTGCACAATGACATATGAATCGGTTATGTTTTTTTTACCCGATGCAACGCACGG
GCATTTGTGCTAGTACAACTAATATGACTACTATTAAACCCGTCATATTTGTCTAATTTG
TTTTACTACTATTACAACAACCCATGTGTGTATGCGATAGAAAACTTGTCCAGGAGGGAG
AAACACAATTACACAAGGTCAATTAATCAGCCTATAGGAGCAGCAAATTAACAGTTTGGA
CAGTTCTATACAATTACGAAGTGTTTCGGAACAAAAAGTTATTTTATCGTCGAAAGCAAA
AAAAAATGAAGCACGGACCTTTTTCAGGTACGTTCATCATATCAAGTTTTAACGCGCAAA
TAACTGTTACTCTTGAACATGTTGGGTTTCATAAAATGTAGGCACTCATAGGCGCAGATA
ATATTATTCGTAATCAACCTACCACGCACGAAAACAGGTTGCTCCTCAGAGATAATATCT
GATAAAACCAGCTTTAGTCTATTTGCCACCACCTTCAATGCAATCTTGTATAAAACGTTA
CAAAGACTGATAGGCCTGAACTGTGTAAGTAGAGTGGGGGACGTCACCTTTAGGATAAGA
ACAAGTAGGTATCGTTGATGCATTCCGGGCTCTCCACCCGTGTGACAATCCTTAAAACAA
TCTTAGTGACGTCGTCCCCACACACATCCTAGTATTTTTGATAAAAAATGGGTAGGGAAG
CCATTAGGACCCACGCTTTTGTTGCACTCATTTCAAACAGGGCCACCCTGACCTTCTCGT
GTGTATATGGAGCACAAAAGCTAGTGTTGATGGTTGGGGTGATCCCGCATGGGACATGTT
TCAGGATCGTATCCACTCCTTTTACTCCCTCGGAAGAGTAAATTTCATTGTAAAAAGAGT
TAGCCATAGCCCTCATCTCACCCGGATCCTCTGTCAAGACACCCATAATATTTTGCAATG
CGCGTATCATGTTCTTCTTCCTTCTAATACTAGCTCGTAGATGGAAAGTTTTAGTGTTCT
TATTATCAGAGGACAACCATTCAATCTTGCCCTTTGCCTCCACATAATCTCCTCACGGTT
GTATAGTTCCACCAGCCTCTCATTTATTTTCAACTCTGCATGGGAGGGGGCTGTGCGAAG
AGGATCTTCGTGTAGCTCGTCCAGTTTCTGCTTCATTTCCTTGATTTCACGACAAACACT
TCCAAAATACTCTTTGTTCCACTTGATGAAACCCTTTGAGACCCTCGTTAGTTTTGTTAT
GCAACTCATGGATGTTGGTACATGGGTCCCGAGCTGTCCACTCTGAGAGTACCATCGCTC
TAAATTCATCATGTTTATCTGACATCGCCTCATACCGGAAGGGTTGCCTTCCATTGCTAA
ATTGATTACGCCCCAGATCGAGGAGAATAGGACCATGGTTGGATGTAGCCGCTCAGTGGT
GCTGCAAGCAAGGAGACAGAAAGAGAGTCATCCAATCGGCATTAACAAAAGCATTATCCA
ACCAACCGCACCTTGTTTATGTTCCATCTGCGACCTTTTTCTCCCAAGTCCAGAATCAAC
CTGTATAACCAATATCAAGCAACATGTAGACATCAACGGCCTCTTGGAAAGCTTGCATTT
GGGCATTGTTGCGTGTACCAATCCCCTGATGCCCATGCACATCTAGGGTAAAGTGCTCAA
AGTGCTAATATTCTTCAGAACGGTCCAAGTCTGATGGCTTAGGTGGGTGTGGGCCTCACC
GTAGACACATGTAAATATCCATTTATCAAAACCAGCTTCCTCAATGGACACATTCAGATG
ATAGCAAGAGTAACCCAAAATATCAACCTTTATTTCATTTTTCGAGAAGATCCCTAGACC
AACACTTCTACCTTGACTATCAACAACGAAAGAATTATCATACCCCAAAGTATTGGCTAA
AGCTTCTACCCTAGAAAATAGTAGGGGTTGACTTCGTCGCTAATTCGCAAAATTCTTGAA
TTGTCGCGACATTTCCCACTCCGCGACAGTTCCATCATAAAGCACTCATTGGGCCGGGCG
GTGCTCCTCGAAGGAGCCCGCCAAATTTTTCACTATGTTGTTCTGCCCTAGCTTCTCATC
TTCCCCAATTATGGCCCTTTTGAATCTCTGACAGGTGGTGGGCTAACACCGCCACCGCCT
CCTTGAATAACAACTAGTTCATCGCCCCTTGGCTGAGTGAGTTGCTTGCCATGATGAGTT
TCAGAGATAGCCCTGAGAGCAGGCCTCTCCGTTCTCTTACTATCTGGATCTTCCATTTTC
ATGCCCTTTGGACCCGTATCCTCATCTTCCTTATAGGTCTCATGATCATAACCATCTTCT
TTACCACCTCGATCACCCCTGGCTCGGCCTCCCCTTCTACCTCCCCGGCGCCCACGGGAA
CCTCCTTGACCTTGATCGTGACGCATGGCCCAAGAAGCTTGGGGATCCTTGAAAACTAAG
GCAGTTTTTGAGTGAATCCCGTTACCATGTTCTTTAAACACATGACCCAGGTGCCCACAA
ACTACGCACCAATCTAGAAGTCGCTCGTATTTCACCCTGTAGATTTGTCTCTTCGAGTCT
CTGATTAAAGATATTGCATTCTTCAACGGTTTGTGGGCATTGATTTTGACCCACGCACGG
TAAAATTTCCCATGAAATCAAAGGACGTATGCTCTGAGAACAGAACTTCTTCCACCTTTG
AGGCTAAGGCGGGTACCAGGTGTGCATATAGGCTCGGGACATTATGTATCTGGATCCATA
TGTCCAAGCTATCTAGCTTAACCTTAGATGGATGAGTTACTCCATCATATGGATTATGAC
TGCATTACCACGGAAGTTCCAAGGTCCTTCCTGCATGACTCGCTCCCAATCGCCAAGGCA
ATGGAATTGAAGTGTGTACAGACTCTCCTCCGGCGGCTTGAAGTTGATCGGCTGCTCAAG
GCTCCATGCAGCACACATTTTTTTGAAAAAACTATCCCTGGCTGTATGGATTATCAATGT
GAACTCGCGCCACCCCAAGCCATCGAGCAGCATCCTGCGGCACCTTGGAATCGTCCACCA
CCACGCCGTCCATGTTGCCTTCCTGGAGACCAAGCTCCGTCATCAGCTTCTCAATCTCAG
ATGCGAACGAAGAGCCGCCCGCCACAGCCATAGTTCAGAAAAACCTAACCCGATCTCTCG
CGACCGGGTATATGAAGGTAGGAAAACCTAACCTAGCTCGACCCCAACCAAGAAGCTCGA
AACCGAGACGGAATCGAAGCCCTCGTCCAGTCGGAGGAAAGAGATAAAGCTTCCGACTCA
TCGACGACGGGATCGTCGTCGAGAGGACGCTAAAGGAAAGAAAAAAAAGAACATCCTAGT
GAAAAGCAAGGCGAGCTCAAAGACTCAAACGACAATAAGACAGAGCCCAACCCATTAAGA
AAGCCCAGCAGATATAACATAGCCGTTGGCTGTAGAACCTACGAGACCGTTCTCTAGAGC
TTTAGACAGGGTCAAAGCATGGTCTTGCCAACTGCCGCGCGCCTATTGGCCACCCGCGTT
CACTCCGGCGCCTTCTTGATCGTTCTCGAAAATTCCCAGCATCCTAAATAAAACCCGCGC
CCCGCCCGTCCCTCCCTCCCCACCAGTTCCATCGCGACCGATTCCCAACTCGCAGCAAGC
AATCAAGCGATTTTTCTGAGATCTCGAGTTCTTATTACAGTAGCAAGTTTCCGATTTCGT
CTTCGAGCTCCTTTTCTGTTTCCCCCGTTCGAGCTTAGAGAGGAGGAGGAGGAGGAGAGG
GGAGAGATGGCCAAGGGAGGAGAGGGCCCGGCGATCGGCATCGACCTCGGCACCACCTAC
TCATGCGTCGGCGTGTGGCAGCACGACCGGGTGGAGATCATCGCCAACGACCAGGGCAAC
CGCACCACGCCCTCCTACGTCGGCTTCACCGACACCGAGCGCCTCATCGGCGACGCCGCC
AAGAACCAGGTCGCCATGAACCCCACCAACACCGTCTTCGGTACGTGCGCCGCTCCTCTT
TGGTTCTGAATCACCTCGTGTTCATGCCTGGCTTGCTACGGTTGGTACTGTGCTCGATCA
TGTGCGTGTATGTCTTTTATGTGATTATGCATCGCAATGCAGATCACTGTAGTCTGTTTT
CTGAATTTTGTTTGTCTAAATATGATTGTTTACTGAGCTTAACGCGTAGCGAAGGAACAA
ACTCGAGATGTGTCTAATCATTGGCGTCGTCCTGTTCTGCATTCTCATGTATTCGAAGAA
CTGACGGAAATATATGCAGTTAATCTGATCAAAGGTTTACTATATCCCATTAGTTCCAGT
AAGATTCTGTAAAAACTTTGCTGATTAAGGTTTCTGTGCTGAAAACTGCTCACGGGTCAA
CAATGGGACGCTAACTTTGGGTTAGCTGAACAATTTGTTTCTTATTTGGGACTTTTAAGC
AGTTCCTTGAACTTGCCAAAGCTCTGCTGTTGCTCTGCTTGCCTATTTTTTTTATGAGTT
TGAGCGTCAGTTATACAGTCGAACAGTACGACTGACAGTCATGCTCTATCTCTTGTCGCA
GATGCCAAGCGGTTGATTGGCAGGCGGTTCTCCGACCCGTCCGTGCAGAGCGACATGAAG
CTGTGGCCGTTCAAGGTCATCCCCGGCCCTGCTGACAAGCCGATGATCGTCGTGCAATAC
AAGGGCGAGGAGAAGCAGTTCGCCGCCGAGGAGATCTCCTCGATGGTGCTCATCAAGATG
AAGGAGATCGGTGAGGCCTACCTCGGCACCACCATCAAGAACGCCGTCGTCACGGTGCCG
GCCTATTTCAACGACTCGCAGCGCCAGGCCACCAAGGACGCCGGGGTCATTGCCGGCCTC
AATGTGATGCGCATCATCAACGAGCCCACTGCCGCCGCCATCGCCTACGGCCTTGACAAG
AAGGCCAGCAGCTCCGGCGAGAAGAACGTGCTCATCTTCGACCTTGGCGGCGGCACCTTC
GATGTGTCGCTGCTCACCATCGAGGAGGGCATCTTCGAAGTGAAGGCCACCGCCGGCGAC
ACCCACCTCGGCGGCGAGGACTTCGACAACCGCATGGTGAATCACTTCGTACAGGAGTTC
AAGCGCAAGCACAAGAAGGACATCAGCGGCAACCCTCGCGCCCTGCGCCGGCTGCGCACG
GCCTGCGAGCGCGCCAAGCGCACCCTGTCGTCCACCGCCCAGACCACCATCGAGATCGAC
TCCCTATACGAGGGCGTCGACTTCTACTCGACCATCACCAGGGCTCGCTTCGAGGAGCTC
AACATGGACCTGTTCCGCAAGTGCATGGAGCCCGTGGAGAAATGCCTCCGCGACGCCAAG
ATGGACAAGAGCACCGTGCACGACGTCGTGCTCGTCGGCGGCTCCACCCGCATCCCCAAG
GTGCAGCAGCTGCTTCAGGACTTCTTCAACGGCAAGGAGCTGTGCAAGAGCATTAACCCC
GACGAGGCCGTGGCCTACGGCGCCGCAGTGCAGGCCGCCATCCTCAGCGGCGAGGGCAAC
GAGAAGGTGCAGGACCTGCTCCTGCTCGACGTCACGCCGCTGTCGCTCGGCCTGGAGACC
GCCGGCGGCGTGATGACGGTGCTCATCCCGCGGAACACCACCATCCCGACCAAGAAGGAG
CAGATCTTCTCCACCTACTCGGACAACCAGCCGGGGGTCCTGATCCAGGTGTTCGAGGGC
GAGCGCGCGCGGACCAAGGACAACAACCTGCTGGGCAAGTTCGAGCTGTCCGGCATCCCC
CCGGCTCCCCGCGGCGTGCCCCAGATCACCGTCTGCTTCGACATCGACGCCAACGGCATC
CTCAACGTGTCGGCCGAGGACAAGACCGCCGGGGTGAAGAACAAGATCACCATCACCAAC
GACAAGGGGCGGCTGAGCAAGGAGGACATCGAGAAGATGGTGCAAGAGGCGGAGCGGTAC
AAGGCGGAGGACGAGGAGCTGAAGAAGAAGGTGGAGGCCAAGAACGCGCTGGAGAACTAC
GCCTACAACATGAGGAACACAATCAAGGACGACAAGATCGCCTCCAAGCTCCCCGCCGAC
GACAAGAAGAAGATCGAGGACGCGATCGACGGCGCCATCAGCTGGCTCGACACCAACCAA
CTCGCGGAGGCGGACGAGTTCGAGGACAAGATGAAGGAGCTGGAGGGCGTCTGCAACCCC
ATCATCGCCAAGATGTACCAGGGCGCTGGCGTGGACATGGGTGGCATGGGCGGCGCCGCC
GGCATGGACGAGGATGCGCCGGCCGGTGGAAGCGGCGCGGGGCCCAAGATCGAGGAGGTC
GATTAAACTGGAAGAGGCGGTGGTGATTCTGGTAGCGGGACAGTCTGAAAGTCTGAAATG
TGGTGGGTTCGTGTTGTGAGTCGAGATGGAGAACTTTTGGGTCATTGATTGGATGTCAGT
GTTATGTAATCCTGAACTTGGGTCGATTTAAGTAGCCGGTATTGTACCGGTGTTTGCTTC
GGATCATGTTATCTTTCATGTTCGTTTTTTTATCTGTGCAGAACTAGCCACCGAACGCAC
GATCAAGATCAACTGACCTGACCATGAGTGCGAATATCTGATGCTCACTGCAAAATCTCA
TATGACCACCGAATACACTTCATGAAAACTTGTTTTCTTCAGAATAATATGAAGCCATTA
AAGAAACAAAAAAGTTGATGGAAGAACAGACGACCCGTTTATCATCAAGTGAACGAGAAA
AATAGATGGACGTGTTCTTCTTTTGTTCGTCTTTCCACAGGGGTGCTTTTGCTTGAATGC
AACTTTACTCGTTGACAAAGAAATTAGTTGGTCTCAACGACTTGAAACAGGGGATGCAAC
CCTTGCATTTCGTTCTCTATGGCACGCACTTCCTTGCTCGCCATGCCTTAGTCGTGACAT
AACATTGTAGACATATGTCTGGTTCATTGTCATATTTACGCCATTTTTTTTCCTACATGA
TTCACATATCATATACTCCCTCCGTTTTTAAATATAAGACCTTTTAGAGATTGTACTATA
AACTACATACAAATGTACATAGACATATTTTAGAGTATATCGTATAACCTCGTAATATGT
AAGCCAAAACAAGTTAATTACGTTTTACATATAAAAACTAATTT