Contig Data
morexGenes
Links



Map Locations of contig_61423 (5878 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_61423

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72310 2 731 bp MLOC_72310.2 Available Available None
MLOC_72312 1 908 bp AK365434 Available Available None
MLOC_72311 3 763 bp AK365434 Not available Available None
MLOC_72313 1 561 bp MLOC_72313.1 Available Available None





CDS Structure of MLOC_72310






CDS Structure of MLOC_72312






CDS Structure of MLOC_72311






CDS Structure of MLOC_72313






Contig Sequence (5878 bp)

>contig_61423 5878 assembly3_WGSMorex_rbca.fasta
CTTTTACATAGTTAGTCCTGTTGAATTAGAAAAGGAGCAACCAGGGGTTGGTTATGCATG
TCAATTTACAATTCTAGTTACCAGTGTAGTATGTGTAGTGGGGACTAGGGACTAGAAATC
ATTTTTCTAGTGAGTGGAATTCAAACAACGTCGTAAGGGCTCTGGGAAAGAACTTTAGTC
TCCCAGCCTCCGAGCATGACCAAGGTGAACAGAAAGAGTGAACTATACAACTCCATTTCT
GGTAAATGACAAGCACATATGGTTATCTCATTTCACCAGATTTTCTCCTTAGCAGTGAAT
GTTGAGGAATAACACAGGAAGAGTTGGTATTCCGAAGCTAGTAGTTTGCTGTTCTCATGC
AATGAATCTGTAAAGTGAAAATCCAACACGTCAGTTCATTTAGTCTCATAGTTCTAAATC
TCATAGTTATTGACTTGAAAGATGAGTAACTTATATATTTACTTGTATCTTCAAACTTCA
CAACTTAGTTTTTTTCTTTCTATAAACATCACAACTTGTTTTTTTTCTTCATATAAACAA
ATAATTGTTTGAATACTGTTGAAATCTAACTATTATTTGCTTAAATACCGGTCAGGTGGG
CCATCCCATTCTTATGACAGAGTGCGAGTGCAATCCATCCTTTTCTCGAGCACGAATGTC
TGAACTTCTTTTCGAGACATATGGTGTGCCATCCGTTGGTAATGTCTTTTTTGATCTTTA
TGTGCCATTGTTATGACTTATGAACCACATCTGTTAGTATAGTAGTGCAGTAGCACAGTC
GACAGAAACATAAGTAATAATGTTTTCTTTAACTATTTGAATTTCAGCTTTTGGTATCGA
TGATGTATTTAGTTACAAGTACAATCAGAAGCTTGGAAACTGTGGAGAAGATGGGTTGGC
TATTTCGTGTGAATTTGGAACATGCCACGTTGTTCCAGTAAGTTTTTTTCAAGATACGGT
TTCCTCCAACTGTGTGCAACATACAAGTCATTTCATGTCTCTCCTTTTGTCAGATACCAT
TAAATGAGTACAATTACATCTGTTTAGGAGCAAATACCATTGACTGTGTTTGAATTATAA
GTTTCTAATTGGATAAACAGAAACATTTTACAGTAGATCATATGTTGAATAAAAAGAAAC
AGATGCTACCATTGTGTTGCTTTCCAGGCATGTACTGTCCCCTTTTCTGCTCCCAGCTCC
ACAACTTCAGTCAAAAAGATGCATTTGCCTATTGGGTTACTGTGCAGAGCTTGAGCCAAC
AATATTATTCTGGCAACTCTCTCCATGAGGATCTGCACAACAAATTCATTGTTTGGACCG
AATGTGCTGTATATTAGTTTGGCTTGTTGACTATTTCAGAGACCATGTTCAAGAAAAAGT
CTCAGCAACTTGCATTTATCTATCTGTATATTTCAAATTAAGTTGTTGATCTGTGGACTA
AAAGCCATGCTGGATCTGTTTTCAGTTCTTAAAAGGGCAGCCTGTGCTGGGGGCATGCTG
CCGAACAAATGTTGGTGGATCTCACATTACTGATTTCCTGAGGCAGCTCCTCTCTCTTAA
ATATCCCTATCATGTGTATGTATGAGCACATTTTTCCGAAGTACTTTGTTTTATTTGTTT
CCCCTAATCCCTACCATTTCCATGTCTAACAGTAGCCATTTTACATTTGCATAGGGCAAA
CTTTTCATGGGAAAAGGCTGAAGAGCTGAAGAAGGAACATTGCTATATAGCTGCTGATTA
TATGTCAGAGTTGCAGATATTCAAAGTAAGATATTTGTATCTATTTCTTTGTTCGCTTGT
CAATTTTCAGAATTATCAAATTCCTATTCCCGATGTGTTTTCGTGTAGAAAGGACAGGCT
TTTCACTGCAGTTGCCTTTTCATTTTCTTGGAGTTTCTTTATAGAAGCATATTTATAGCA
ATTATATACTACATTGTTGCAACACCATGAATTGATCACTTCAATTTGCAGAATAACAAG
GAAGAAGCTGAAGAGAAGACTAGGTATTGGCAGCTACCATGGGTACCCCCACCCAGAGAT
GAACCGCCATCTGAGGAAGAGCTTGCGAGGAAGGCGGCTTATAAGGAAAAGGCTGGTCAA
CGTCTGCGAGACATGGCTGCTGCAAAGAAGTCTCAGAAGATAGCAGATCTGGAAGAAAAA
CTCTCTGGCCTGGAGGATTTGATGGATCACCTTGATGGAGCTGATGAACAAGAAGCAACG
TCTATTCTGGGTAGATCTGGATACCTTTCCCAGCAGGAAATCAAGTCTGATATTCTGAAA
GCAACACAATCTCTAAGAAAAGCGAAGGGGGAGTCCAATGGCAATGAGGAGAATGCAGAT
GCTTCAGGAGCTGATAAGTACCCACTTGTATCTGTCCCTGATGACATGTTGACACCAGAG
CAGGTATGTGTTTAGTTAAGCTATCGTCTATGACTTGTTATGTACTAGTCAACGTCTCAA
CGATGGGATTCATTAATGCGCTTTTGGGATCATCTTGCACCTTCGTAATGGTAGGATAAA
TGTAATCTCCCATGGTTAACAACTTACTCCCTCCATCCATATATATAGGGCCTAATGCAT
TTTTCGAGATTGCCTTTGAATATTGATAATATTAACAGTATATGAAATGTATAATGTAAA
AATTATATCATTGAAAGCTCCTTTCACATACGAACTTGAGGATATGCTTTGTGTAACTTG
CATGCCATATATTATTGCTCTAACATATGGTCAAAGTTAGCCTAAAAAACCGCATTAGGC
CCTATATATGGATAGAGGGAGTAACATCGTTCTGTGTCTGTGTTCCACTTTTGCTCTTTT
CCAGTTAAAGGAAAAGAAGAAACAGATACTACTTAAAACCACAACAGAGGGCAAGCTGCG
CGCCAAACAGAAGCGTGCCGAGGAGGCAGCATTGAGGGAGAAGCAAGAAGAAGAGAGGCG
CACGTAAGTGGCGACATTCCCAGTCTGTAATTTGTTACTCCCTCTGTTCACAAATATAAG
ATGTTTTGGATATTTCAATATGGACTACATGCGGACTGAAATGAGTGAACAAACACACTA
AAATGTGTCTATATACATCGATTCAGAAATGTGTCTATATACATTCTATATGGTAAAGTC
CTGTATGAAATCACATGCCATTGTGTCTTGTTGATGAAACAGTTACTAAAAGCCATTTTG
ACACTTCTTTTGTTCTTTTGAGACGTTCCATGTTCATCAAATTTTAAACTGTAATAGGAA
AGTACATTTCTGTATTTTTGTAACAGCAACTAGTTTTTTTTTGCCAATTTTGGAGGAAAA
ACCAGTGTTTATACCATAATAGCAAACTAGTAACCACATATTAAAAAAAGATTTAAGGAG
AAGAAACTCCCTAACTTTTCATCTAACTACTAGTTGGGAGACTCAAACCCAGGTGGGGTG
AGTGGAACCATGTCATTTTTCTCTAGGAGAGCTCCCCCTAGCAACCACATTTCGCTGAGC
TCAGAGCTGCATTGGCTTCAATGCATTAGAAGTTTCTTAAAGCTTTTGTTTCTGTAAGAG
AATATCACTAGAAAGGCTGAATCTTGTGTTAAAGATGCTCTTCCTCGAAATTGGTACGAC
TTCTAAACCTGTCTTAGAGATCAAAGTTACAGGCTGATAGGTTCTACAACCTGGTTGATA
TGGATAGTGTACTCCCAGATGTGCTTGAGGTTTTCTATTGTTTCTTCTGTAATATGTTGT
CACTCTTAACTACACAGGGAGAACCCAGAGTTATACTTTGATGAGCTCCGTGCCCGATAT
TTAGAACTTTCTGAGAAAGTCGATCAGAGGAAGCGACAAAAGGTTAACGGCAACAATAAT
TCATCTGGCGCCGTAGGCCGTGGCGAGCGTCTAAATGCCGTCCAGAAAGAAAGAATGCGG
CTGCTCACCACTGCTGCATTTGACCGAGGGAAAGGCGAGGACACTTTTGGAATGAGAGAT
GAAGATTGGTTGGTCTACAAAAAGATGAGCAAAGAGAGCGAGGAAGATGATGGAAAAGAT
GATGATGAATCAGAACTTGCTCGAATCGCGTCAAAAATCCAGGTAAGGCCCCACTCTCAA
GCTTTCCTATTCATGATGTCCATTTTCTCATGATATCCGCGTTTCTTTGGTGAAGTAAAA
AAACACAAACTAAAATTGTATCATATAACATGACGCTTCCCCGTGCAGGAGGTGGACCCT
ACGTTTGTGAACAAACATGACGCTGTTGAACCAGCTCCAGACCCTCATAAAATCCGGCCT
CTCACTGCAGAGGATTTCAAAATCGCCATCGGGATCGAGCGGTTCCGCTGCCCTGAAGTA
CTTTTCCAGCCAGGCATGATAGGACTCGACCAGGCTGGCATTGACGAGATGGTCAGCATC
TCCCTCAGGAGGTTAATGGAGGACGAGTCCGTCAAGGAGCGCCTCTGCCAGTCCATCCTC
GTCACGGGCGGCAGCTCCCTGTTTCCCGGGATGATCCCTCGGCTCGAATCGGGGATCCGG
CAGTTCCGGCCCTACCTCACGCCGCTGAAGCTGGTGAGAGCCGCCGACCCCATCCTGGAC
GCGTGGCGGGGCGCTGCGGCCTTTGCGGCTTCCAGCAAGTTTGGGAAGCAGACCTTCACA
TTGGCGGATTACAGAGAGCACGGCGAGAGCCTGTTCCATCGCTACAACATTGTCTACACG
CTGTAGCAGCCTTCTGTTGGTGTCTTCTCCGCTAGCGTATAGAGAAACTGACGCGTCTTG
CTTGTAAACAAAAGTTTTTTTTTTTTTTTGCTTGTGATCATGCATCTTGTGAAGATGACA
TATTTTTAACTCTTAGAAACACTGATACCGATCATTATTGTTTATTAGTCAGTATATTAA
TTGATATCCATAGTCCAAGCACTTTGTCAAAAGAAATGCATACTCTAATAGTCTAATTGT
CCTGCTTCCTATAATAGGATCCCTATCCACCGAAAATACACTTTGGTTCCTGGTCGTATA
TGCACCCTATATGATCTTTTTAATAATTAATTAAAAAGTTAAAATAATTCTAAAGTCTAG
TATATAAATTTTCATGGAAAAAAGTCAACATTGACTTTTGGGCAAAAAAGGCAAAAATTA
TTTGCTATTATAGATCACTATTCACACTATTTTGACATAAAATTTATCTTTTTTAAAAGG
AAGTCAAAGTATAATTTTCTTTTTGTGTAAATTTTTTTTACAAGTACAATGAAAGGTCAA
ATTTATTTTAAAAATATTTTCAGATATTTTTGACTTTTTGTTGAATTGTTACTTTATTTT
TGCATATAGGATGTATATACACCTAGTTTTCAAAAGTCAATGTCAACTGTCAATTTGGTA
GAGAATCTTTGAAAGATACTAGATTTTAGTAGTGATCAGTTCTTTTCTTTACTATCTTTT
TTTTTGCGACAAGTTCTTTTCTTTACTATCAACCATCCTTCTACTTCCTCCCTTTTTAAA
TATAAGTCTTTTTAGAGATTTCACTAGGGGTATATACACTAGTATAAAACGGGGCTATAG
TGCTGGTTGGTAAGGGTCTATAGTCCCGATTCTTCAACCGGGACTATTAACTTGGGACTA
AAGACCCCCCACGTTTAGTCCCGGTTTGCCACGAACGGGACCTACCACCGCTTGAAAAAG
TATTCGCAAAAAGGCCCAACGAAGTACAACCACTTAGAGAGAGGTACTACCGCCCTCAAG
CGGTACTACCGCCCACCCCGAGTGGTACTACCGCTCAGTGAGGGTACTACCGCTTGACAC
AAGCGATACTACCGCTCGCCACTGAAACAACCATAACTTTTGCATACGAGCTCCGAATCG
AGCAAACCCAATCTTGTTGGCAATCTTAAGAACATGCAGATATGAAAAAACCAATGAT