| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
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Predicted Genes from contig_61307
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_72248 |
1 |
416 bp |
AK250607.1 |
Not available |
Available |
None |
CDS Structure of MLOC_72248
Contig Sequence (4701 bp)
>contig_61307 4701 assembly3_WGSMorex_rbca.fasta
ACTTCAGCAAGATGGAGGCGGGAACTGATCAATTCAACCTTCTTACCGTTAGATGCTAAC
GTGATTCTCAACATTCCCCTCAGCACAAGACAATATGATGATTTTTGGGCCTGGTCGCAA
GAGAAGAAGGGAGAGTTCACCGTAAAGTCCTGTTATCGCATGCTCATTACAACCAAGCTT
CGACGGGAGGCCTGGCTCGAGGGACGCGGTGGCCCGACGGACAGCAACAGAGAGAAGAGA
TGTTGGGACACTCTGTGGAGGATTCAGGTTCCGTCAAAGATCAAGGTCTTCCTGTGGCGA
CTTGCACAAAGTTCTCTGCCCACAACGGATGTTCGTCATCATCGTCATATGGCAGCCTCC
CCATCCTGTGCGATATGTGGGGCAGAAGACTCTTGGCTCCACTCCCTTCTTACATGCACA
ATGGCACGGTGTGTTTGGGTGCTACACGATCAAGAGCTAGTCGAGCATATGCTAGCTACA
GCGGAACCGGACGTACGGTCGTGGCTTTTCAGTATGATATCGTCGATTTCATCGGAGGAG
TTGGTTAAGATCACGGTCACATTATGGGCTATATGGTTCGCCAGACGGAAATTGATCCAC
GAAGGAGAACATCAAAGCCCATGGGCAACACACTCCTTTGTCAACAGATTCATAGCCGAG
TTGGAAGTAACCAAGGCAAAATCACCTATATCACATGCAAGATCGGTGCAATCTAATGCT
CGCAGATGGATGCCGCCTCCCGCGGGATGGACGAAGGTAAATTTCGATGGTGCAGTATGC
AAACCCCCCCCATAGGCTCTTTTAGTGCAGTGTGCAGGGATGATCAAGGCATTTACCTGG
GTTCATCAGCTGTTGTTTTCCATGGATTAACGGACCGTCATGTTTTGGAAACATTAGTTT
GTCGCGAAGCCCAGTCTTTGGGAAGAGATCTTTTATTACAGAAGGTAGCAGTGGCGTCTG
ACTGTCTAAATATGGTTAAAGAAATCAACTCAGGATCCTGTGGGGTCACAACCTCTATCA
TCAAGGAAATCAAGGAAGGGACGAATGACTTTCAAGACATATCCTTTGCTCATGAAAGTA
GATTATCCAATATGGAAGCTCATCACTTAGCTAAACATGCTCTGCACACGGGAGAGGGAC
GCCATGTGTGGCTCCTCCAACCCTTTGACACTACTCTTATCCCTGTAATTCGCATTAGTG
ATCAATAAAGCAGTGTTTTACCCCTAAAAAAACCCCGAAACTATAACCCGTTTCTCTCCT
AGTGTCGCTTTGCACGTAGAGGATAGAGCAAGCCCCTGAAGGCATCCTACTAGGCGTTTT
TCCCACATCAAATCCATAAATTTAGGTTCTTTCTTTCTTGTGCCCAACATATGCCAACGA
ACGACCATATCACACGTGCCAGGAGATCCGAGGGCTACCCTCCGTCATTAAGTTATGTTT
AGTGGGGAAGGATATGACCTCACTTTTTATATTTTTGCACACAATTTGAAGGATGCATAT
GAACGGATTTTCCCTGTGCTCGCTGAACGGGTAGCAGATCAAGCCTGGTTTTCACATGAC
AAGCTAAGTTTGCATGCTCATGGTTTCTTGTGTGCACTAGATGGTCATGTATGTTTCTCG
TCCATTTTTCCCTACCATAAATGCTTGATGAACCCATCATTTTATGTCATAAAGTTTCAT
TTTAACAATTTTGTGTCATTATTTAGTATGCTCATCAACTTCTTTTATCTTGTTTACCCG
ACCTTTCACTTTTCAATATCATCTAAGGAACTCTATTTTTCAGTTTCATTTTAGCTAAAA
AAATATGCAGTGAATGTTGCAGCCATCATCGGGAGCTCCTACCTGCTGCTCGTTGCGGCA
AGAAAGAGCTGCCACGCACAGGGCTCGCTCCAACTGAGCCAACCCAGCAAATTTTTTGTT
TTCTGCTTATTTCCTTTATATTTTTCTTTTTTGGTTCGTTTTTTTTCTTTTATTTTCGTA
TTTGAAGCAAAAATATTTTTCAAATTTGAACATCACTTTATGAAAATCAGAACATTTTCT
TAATTTAACAAAAAAGGGGAAATCTTTCCTTTTTTCTGTTACTTTTTCATTTTATGTTTA
TTTCCCTTTTTTCGTTTGTTTTTTCTTTCCTTTTTCCTTTTATTTTTGTATATGAAGCAA
AACATTTTTCGAGTTTGAAGGATTTAAAAAAAAATGTGAATAAGTTTGCAAGCACGAAGA
ATTTTTTCAAGCACAACTATTTTATGAACTTGGAAACAAAATTTTGAAAAGGAGAACAAT
TTTTGGAAAACCCAAACAAATTTGAAAGTTTGAACAAATTTTTAAAGCACAAATATTTTT
TAAATTTTGAAAACAAATTTTGAAACTGAGAACAATTTTGAGAAATCATGAACAAATTTG
GAAGCCCAAATAAGTTTTTAAAGCGTGAACATTTTTTAAATATTGAGAACAAACTTTTGA
AAAAGAGAAAAAATTTCAAAAACCCTGAACAAATTTCAAACGCGAACAAATATTTAAAGC
ACTAACTTTTTTTGAATTTTGAGACCAAATTTTGAAACAGAGAATAATTTAGAAAATCCT
AAACAAATTTGGAATGGCAAACAATTTCTTAAAGCCCGCACATTTTTTGAATCTTGAGAT
TTGTTTTTGAAAGTAGAACAATTCTGAAAAACTATAAACAAATTTGGAAGCGCAAACTAT
TTTGAAGATTTTTTGAAAACGGAGAACATATTTGAAAGAGTGAACAAATTTTTAAAGCAT
GAACATTTTTTAAATCTTGAAAAAACTTTAAAAATGAGAACAATTTTAAAAAAATCATAA
ACAATTTTGGAAGACCGAACATGTTTTTAACATTTTTAAATCAAGAATTTTATTTTAAAT
CGAGAACAAGTTTCAAACTTTTTCGAATTTCAAAAACAATTTGAAAAATCCATAACATTT
TTTGAAAACCAAAAACATTTTTCAAAAATCCAGATTTTTTTTGAAAATGCAAAAACATTT
TCCAGTTTGAAGGAAATATGGAACATGAATGAAGTTTTGAAAAAAGATAAAGTTTGGAAA
TATGGGATATTATTTAGAAGTAAGTTTTTTAAAAAATTGAAGAACATTTTTCACATTTTA
AGAACATTTTTAAAAAATCCAGAACATTTTTGAAAATGCAAAATGTTTTTTGAAACAAAA
ATAGAAAAGAAAACATAAAAACCGGTTCAAGAACCTTCTAGAAGTTTTCCAAAATCGAAA
AAAAACAGACTAAAAGCCTCTAGAAGTTCCCAAAACTAGGATCATCACCAAGGCTTGTGC
GTTTGCCGACCATTTACAGCAAAGAGCGACAAATAAGGAATTCCAGCAACATCAACAATT
CTAACTTGCTGATCAGGCCGTCGTGCAAGATCGGCTCATTGGGCCAGGCTACATCTCCCC
CTCCCCCATTTCTTTTCCTTGTATGGGTGGCCCAACCCAAGTCCAAAAGCCTTCTAAGAT
TTTCCGCCGAGCCCAAGCCCAACCCCATGCCTCTCATCACAGACACTACCTCCTCTACAT
AAAGTGCCGCCGTCAATCCTAGCGCCGTCGCCTCCTCTTCTACGTCCTTAACCCTAGATC
GCCTCTTAGGGCATCTCCAACAGTTTGTTGGTTAGCTTGTTGGTAAAATATGTCATGTCA
TCAGTCAACACCTTAACATACAACTACTTTAATGTGTTGTATCTAGTTTGCCCAATAAGA
TATNNNNNNATAAATAAGGTGCTCTCTCATTCTATTTTAAAGCTTGTGCAAGGGTGTTGG
TTAATTTACATATACAACCTTGCTCTCTTTCTTCATTTATTGTATGACGCTTCATTAAAA
ATCTTATGTGTCAAAATTACCAACAACTATCTTACAACCATTGAAGATGCCCTTAGAGGC
TAGAGCTGGCTCCCGAAAGAATCATAATGTTATTTTTAAGTCATCAAAGAAGGAGATGAG
CCTCACGCCCCAGGCCACGTCCCTGGCTGCCTGGGGCATATGTCCCCGCCCATGATTTTT
TGCACCTGGAGGCTAGAGCAGGCTCCTATATCGAACCTATTACTTTGTTTTTTTTTCTTT
TCTTCTTTTTGGTGCCCAGCAGGCTTCTTGGGCCGCCATGCTGCATCTTTCCCACACCTC
TTTTCCTTGCACGGGTAGCCCAGCCCAGCCCAAGGCGCAACAAACGAAAGAAGAAAGCCC
GGTAAGGTTTGACGCCCAGCCCATGCCTCCATTGCCTGGCATCTCTTGCAGCGAGCCTCC
TCTACGTAAAGCGCACCAATCTCCAAAACCTAAAACCTAGCAGCCTCCAGCTCCAGCGCC
GCCGCCGCCGCCGCCGCCTCCTCTGCCCTAGCTCGCAGCGCCTCCTCCCCACCCCACCCT
CCAGCCATGGCGACGGAGCTGGCCTACGCCCCGCCCATGAAGTCGGGCAAGCTCGGGTTC
GAGGGCACCCAGGAGGTGCAGCACCGGATCCGCATCACCCTCTCCTCCAAGTCCGTCAAG
AACCTCGAGAAGGGTGGGTGCCCGGTGGTGATCCCTTCCCTTCCCCTCCCCCCCGTTCGT
TCCGGCTTTGCGCGTCGCCGATCTGATGCGTTGTGTGGCTGCTTCGTTTGCTTGCAGTGT
GCTCCGATCTGGTGAAGGGCGCCAAGGAGAAGCAGCTCAAGGTCAAGGGCCCCGTCAGGA
TGCCCACCAAGGTGCTCAACA
