Contig Data
morexGenes
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Map Locations of contig_61250 (4722 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_61250

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72217 4 2046 bp MLOC_72217.2 Available Available LOC_Os04g33530.1, FRAME:-1, EVALUE:0.0, 13104.m03245 protein Ser/Thr protein phosphatase family protein, putative, expressed





CDS Structure of MLOC_72217






Contig Sequence (4722 bp)

>contig_61250 4722 assembly3_WGSMorex_rbca.fasta
TCATTGATCAACTGGCCAGCCAACTACAGGCTTGCTAGGGNNNNNNNNNNNNCTATGTAC
CCACACATGTATCTATGTTTTCATNNNNNNNAATTATAGTATGGATAATAAATGATTTTC
TTTAAACAGGAAATATAATNNNNNNNNNNNNNNNNNNNNNCTAGGGCATATTTCCAACAC
GTCGAGCATTTTTCTACGGGGAGAATCTCACCAGAGCTGGGAGCACAACCGACGCCTCCC
ATGTTACAACCGGTGTTCCTGAAAGCTACCACAGGCACCGCAAAAAAGCTTCAACCAACG
ACATCAAATGCTGGAACCGGCCAGCGTCATAGCAAAAAGCTACAACTGGCTTCCAAAAAA
AGCTTCAACTGGCGTCCCAAAAAGCTTCAATGACGACGACATATGCCAGGGCTGGTTACT
GTCAATACCGAAAATGATGCAACCGCATTGCAAAAAGCTACAAGCGAAGTTACAAAAAAC
TCCAATCACAACAATGGATGCTGGAGCTGGTCACTACCATGGAAAAAACTGCAAGGAACG
ATGCAGAAAGTTACAACCCGCATCGCAAAAAGCTTCAAGCAGCAATAACGGAAATCATGG
CCGAACGTTGATGAAAGCTGCAAGCGGCCAAAAAAAAAGCTTCAGCCGGCGAACGAGGGA
GCTTCATCCACGTCTAGGAGATGCTGAAAGCGGTCTTCGGGGATGCTACAACCGTGACAT
GAAGAAGCTGGAACCAGCTTGTGTTGATGCTACAACCATGGTCAGTATTGCTGAAGCGGT
TGCAGAGATGCTTCAACCATGGATGGTCTTTGCTGGATGGCGAGCGTTGCAGGAGGGAGA
AAGGAAGGAGGAAGACGCCGGAAAAAGGGACGGCGTGCATCAACGGTGAGCCAATGAGCG
GCGCGACGGGAGCTGGAAGTGGGAGGTCGGGCGGGGGGCGACTAGCAAGCAGGCGCTGCG
GAAGAGGAAGAAGACGCCGCGAGGAAAGGAGACTCGTGCGCGAGTCGCAAAGTTAATAGC
ACAGTTACGCACGTCCGGATCGTGCGGCTGCCAGGCGGCCAGCCGAAAGTTTTGGGTCGA
CGCGCCTGCGCAGAGTACTCGCCTTTTAAGATGTCCATCACTGTTGCGCTGGCTTTTGCA
TTTCACTCCATATTGGTAAGTATACAAGATAAAGAAAACTACTTCTGCTTCCTTGTGAGA
TATTTTACCACGCATGCTTCGGTCTACGTCAAAACAGCCACGCGCGTCCTCGCTTCTGCG
CATCCCCGAATTGGAAGATCTTGAGAACAGAAGTTAGGGCCCGTAAACCTGACAATGTAG
CAAGCCTACAATTCATCGCTCCAAGAACCAGGGAAGGGTTGGGTCCGCCGGCACGCGCCG
TTGGCGGCCAGGCTCTCCAGCCAGAGCTCGTCGCGGACGATGGAGTCAGCGTCGTCGTTG
CGGTGCCATGCCCAGCGCGCCGCGGTCGCGTTCACCACGCTCAGCCGGCCATGCCCAAAG
CTCGCCTCCCTCATCAACGAGAGCCGAGCCAACTTATGATTCTTCTGAAAACTGCGTGCG
GCGACCACACAAACAGGACAGAAAGGATTCAGATATGGAACGAATCAATTTAGTTGATTA
AATAAAGCCTACGCGTCGTTTGCAACTTTACTCGAATGCAAGCCCTTCTCTGTTCCCGCC
GTCGCCGATTGTGATGTGCACCGGCCCGCACGGGTTCGCCTCGTTGTCATAGACCCTTGT
CTGCAACAATTAACATGTGCACATCGGTCTCAAATTTTCACGCGCAAGCAGATAAAGTCT
GGAGGCAAACAACAACTCACGAAGCGTTCGTAGGCGTGGACGTGGCCGGAGAAGACGACG
TCGACGCGGGCCTCGTAGAGTAGGCGCTCCATCGCCTTCCTCATGGCCTCCCCCTCGCCG
GCGTGCGCCGCGTTGGTGTTGTACCACGGGGCGTGCAGCAGCACGACGAGCCACGGAGTC
GCGCGCCGGTCGACCCGGGCGAGGTCGCGCGCCAGCCACCCGTACTGCTCCGAGGTGGAG
TTGAAGGCGGCGTACGAGCCTAGCATGACGACGTGGACGGCGCCCCCGGCCGCGTCCAAG
GAGTAGTAGAGCGCGGACGTCGACCCGCTCTCCTCGTGCGGCATGCGCCACCGCGTGGTG
TAGGCGAGGAACGGGTTGGGCGAGCCCGGGAGCGCCATCCCGGCCTCCACCTCGTGGTTC
CCCTCGGTGACCATCCACGGCCGCCGGCTCGCGTGCTTCTGCACGAACCGCCCGAACGTG
TCCCACAGCGGCTGCTGGGTGTCGGCGTAGGCGAGGTCGCCTGGCACCAGCAGCATGTCG
TAGTCCGTCTTGCTGACGTGGGCCAGCGTCGACGCCGTCCACTCGGTCTGCCCAAGGTCC
CCTGCGAGCGCGAGCTCGATGGGGAGAGCGGCGGTTGGGGTCTTGAGGGTGAACTCGTCG
CCGACCATGCCGCACCGGTAGTAGTACACCGTGTCGGGATCAAGAGGTCCGATCGTGACG
TGGTGGATCTTGCCGGAGGAGTAGAGGTAGTAGCGGTACGAGGAGTGCTCGCCGGTGGCC
GACGAGGTGTAGTTCCCGGAGGCCCTGCCGTACTCCACCACCGAGTGCCCGTGCTTGGCG
TCTGTGACCCATGAAACTCTCATATGGTTCGCCCCGACAACCGATAGATGGACCTGACAC
GCAGATGCCAATCAATTCACCGTAGCCGGGCCGGCATTGGTAAGTGCAATTTGATCGACG
TGCATACCTGTTGAGGGTGGGAGGCGGGTTTGTCGTGCTCCGTGAGGATGACACGGCCCG
GTGGAGGCCGGACATACTCGGCGGCGGACGAGACGATCAGCGTGCCGACCACCAGGAGTA
GTACGAAACGCGTCGTTATCCTGTTTGGCTCCATAGCCTGGACGTGGCACGAGTGGTATA
CAAGTCACCTGGGAGGATCAGCTCGACATCGTTGTGCATGGACCATATAGTGTGGGGGTG
GCATTGGCAGCGGCCGCCAGCGACGATGGCAATGGCCGGGCGGGTGGTGTCGATGGCGTC
AAGGAACGGGAACGTACGGTTTTCTGAAGCCTTTCGCTTGAAGCGTCCTAGGATAGACTG
GTGCTGAAACACCTGCAGCGCCCTTTGCTTGGCGGTGACTTCTCCGTGTGGCCCACCCAC
CTCTCGCTCGCTTTAAGCGTCTGCGTGGCGCGGAGCAGAGCAGCCGTGCACAGCAGGCAC
GTTATCTTTTACACTTTTTTACATGTTCTTTCAGATTCTTTTCCCAGCTAAATGTAGGGT
CTGAAAACAGGGTCTCGTCCCGTTTTTTACACATAAATGATTTAAATTGTAGTTGCTTGT
CTTGTGTGTCATTTGATTACGAATCACACATAAGACAAGCAACTAATATTTAAATGTAAG
TTGCCTGATATAATTTTTTGGATCAGTTGACTTTTTAATTGTTAATTTTTTTCACGGTCT
ATTTGTGTTTTAGGATTCATGTAGCCTGTTATTTGCTTCGGGCTGTTTGTTATTAGTCAA
TTTTGCTTTTGCTTGTTGAGTTCAAAGCCCAATAGCCTACTCTCTCAACCTCGTTTGTTT
CTTTCCTCTTCCTCATTCGTTTTGCGTTAGTATTAGTTGTCTTTAGTTGACGTCTGAAAA
TATAAGTCTTTAATGACACTTATTTTATATCATAAATTAATACCATACTATTTTCAATGC
TTTAATAGTAAGTATGTACTCTTCTTCCTTCTAGATTTCACTAGCGTATACTTAGTGTTG
TTGTTGCGAAATTGATGTTTCCAATTTTTAAAAAAACCAATCCTCATTATATTTTATAAG
GATAAAATATTTTTAGCCACTTGCTTCATTGTTAGTATTACAAGTTTACTTTGGCATATG
TGTAAGTTTCTGCTAGTATAATTATTTTTAAGATGTAGTTGATTGTGTGCCACTTTTTGT
GTGTGTTTATGCAGTTTGATAATGAGTATTTGTATTTTATATAATTATGTTCCTCGTGTT
AGTTGATTTCTTCAATCTGCAAATTAGCAATGTTGCTCCCAAATCAAAATTTCATGACCT
TTTTAAAACACCTCCTAATTAATTATGCAGTAGTGGAAGATTTTTAGCAACTAGCTACAT
TGGAACTAGTACAAGTTAATTGATGAATTCATGGTAGTTTACTAATATTATGATTATTAA
AAAAATTTGTAGTTGAATATGTATAATTTTACTTATCTGCCTATGCAATTCCTATTTTTT
CTTAAATTTTTTGCAAGTAATGCAAGTTAGGTGATCTTAGTTTGTAAGTTCGCTATTTTT
ATTTTAACTTTATTTTATATATTGTCTTCTTTTTTCTTTATTTTTTATTTTTCTAGTGAA
ATGGGATATATATTTGCATGTGAGGCCAATTCATGATTTTTTGTGTTTACACAAACTTGT
CTTCAGTTATAAGAACGCGGATTTGGTGAACATGGTTCCACGCGCACCTTTCATGAATAG
TAAATTCAAAAAAATGCTAGAAAAAAGGGAGTACATGTAATCTAAAGGAATGAAATCAGG
ATTTCGTGGGGAGCGACATTGTATGCCAGGTGGTGATGATGGATTCTCTCTCTCCCCCGC
TCTCCTCCTCCTTGGGAACCAAATCAGCGACGACATCAAATCCCCACGTCTACCTCCGCC
CAGCTATTGGATATTGACCGAGGACAAAGGGAATGACATACG