Map Locations of contig_61216 (7644 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_61216

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72190 3 2071 bp AK248763.1 Available Available None





CDS Structure of MLOC_72190






Contig Sequence (7644 bp)

>contig_61216 7644 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGTTCTTTCTTCGGTTTTCACTAGTTCCTTCGCCTCTCTGCCTC
TCTACTTTCTTTCTTTCTTTCTTTCTATTCTTTCATACACATTCTACATTTTATCATATA
GTACATCAGGAACCTTTCTTAGACTTGTTTAACATTTTTGTAAATACATGATTAGCTTTT
TCAATATGTCTATTCTTTCATACACAATGCACATTTTTATACATATAAAACATTTTTGAT
ACATATTTAACATTTTCCAAACACATGATTAACATTTTTTTAAATGCAAAGATATTGTTG
ACCATTTTTCAAATGCGAATGAACTATTTTTCAAATACACATGGAACATTGGTTTGAATG
ATACATGACTTTCTTTAACTATGCGAACATTTTTATAAAACGTGAGTATTTTTCATAAAA
TGACACGATTTATTTTTTGAAACGTGTGAGCATTTTAATAAGTTTAATGTACATTTTTTT
AATGATATGGGACCATTTTCTTGAAATACACTAACATTCTTTTTACATTGTATAAACTTC
TTTTTTAATGTCACGTACACTTTTTTAAACGTGTGAGCATTTTTAAATACGACAAACATT
TTTTGTAAAAACTACTCTAACAAATTTTTACACTAAGCTAACATTTTTCAAATTCGCAAT
GTTTAAAATGTTAAAGTTTTGCGGTACATGCATTTATAATATTTCTTTCGAAAATATGAA
GAAAAGAAAATCTGATGGCGCTTCCTGGCAAATGTAGTTGTATGGTAGCTAACTAGCTAT
AATTTAATCTGATGGGTATGCAACTGTCCGTCCATGGGAATTGTGGAGCATGAGATCTTA
CTGAATCTGGCAGCCCTTGGTCTCTAGAGGGAAGAGGGCACAGGCAATTGCTGCAAGAAA
GAGTACAAGATCGAAGACAAACACAGCTTCTTTCTGATGACAGCTCTCTAACAATCCTAC
AGCTATGAGTGGGGCAATCATGCCACCTATCCGGCCGAGAGAAGTCGCGACTCCCACTCC
GGTGTTTCGACATGATGAAGGGTAGATCTGGACAAGAGTAATATGCAAGGAATAAGTCAG
TGTTTGCCGATTGTGTTCTACATTGCACATTTCTATGTATTTCTGAGTAGTGAGTACTAA
CCACTAAAAAAAAATATCGCACTATGGAACATTGCGTATAAAGAATTGTCTCGCTAAATT
AATCAGTGTATAATGTCTCGCTAATAGCACGTTATAGCGCTGTTATAACTGGCGCGCACT
ATAGCCGGCGGAGGGCCACGGGCAGTTAGGCCCAATAGCAGTTAGGGACTTGGTCCAACT
TATCGTTATTTTTATTAGCAGCTAGGAGATTATATAAACTCATATAAAGACTCATTTTGG
AGTTTGAAGATTAAGAAGTAGCAATCATTATTGCTCGGCTTCTGCCGAGACCCTAACCCT
AGCAGCCGTTGCAGCCGTCTTCCTCGCGCGACCACGGCGCAGCAGCACCGTCGCCCGCGT
CCCCAACCTTGCGAGCCAGCCTCCCACCCCTATAACCTACGTCAGCGCCCTAGTAGAGAC
CTGCTCCTATCAATCTGGTATCAGCCGTCTCTGGCACTATCATGTCCACCCAGCCGCAGC
CCGTCACCACCATGTCGTCGGCCCTCTCGGGGTCGATCGCCTCTGTCGCCGGGACATTGC
CCGGCTCCGCCCCCTTCGTCTTCATGCCGGAGGAGACGATGGCTACGCTCCAGGAGCTCG
GGCAGGCGGTTGCGGACATCCGCACCTTCCTCTCGGGACCTTATGCCCCGCAGCCGCCCG
GCTCCTTCGCCTACACTGCGGCGCCCCAGCAGCAGTTGTCGCCGCCGCCTCCACCAACCT
TCCCGGCCACCCCACAGTCCCAGGGAGCCCCGGCCGCCGGCTTGGGGCGTCCTCGGGCCC
GGGGATCCCCATCCACCAGGTCCGGTTTCCCCCGTCGTCGGCATGGCTCGCCGGGTCCCT
CAGGCCGGTCTACACAACGGCCTCGGTCCAACCGCATCTTCCACCGCCAGCGATGTTGCG
CCAGGCCGTGCAGTACGGCAGGCCCTCCGGCGCCACCGGCCCTACGACGGCGTGGACAGT
CCCTTCTTCCATGAGGGCTCTTTGATGCCCGCCAACTCGGCCTGTCGTCCTTGTGTTCAG
CGCCGAGTGCGCGCATCCGCCCGCCCTTCACGCCCAACAACCGCTGCGTTTCTTCAAGCT
GGAGTTCGCCACCTACGACGGCACCGTCACCCCCCTGAACTGGCTCAACCAATGCGAGCA
GTTTTTCCGGGGGCAACGCACGCTCACGTCCGACCGCACCTGGATCGCCTCATATCATCA
TGGGGAGCTGCTCAGACGTGGTACTACGCCCTCGAACAGGACGAGGGCGGCATGCCACCA
TGGGAGCGATTCCGCGAGCTGTGCCTCTCGCGCTTCGGCCTCCGGTCCGCGACAGCCGAC
TGGCGGAGCTGGGACGCCTGCCTTTCCTCTCGACGGTGCAAGACTTCGCTGACCGCTTTC
AAGCACTGGCGTGCCACGCCCCTGGCGTCTCGGGCCACCAGCGGGCTGAGCTCTTCGTGG
ATGGTCTGCCCGACCACATCCGCGTGGACACGGAGATGCGCGGGCCACAGGACCTGCAGA
CGGCCATGTACTACGCCCGCGCTTTCGAGCACCGCGGGGCGGCCATGCAGCAGGCGTCCA
CATCCCGGGCCGACACGTCCCCAAGCCCCCGCGGCACCCAACGCCGCGGCTGCGGCGCGC
CCATTCCATCGGCTCACTCCGGTCGAGCAACTCGAGCGCCGTCACCAGGGACTATGCTAC
AACTGCAACGAGCCCTACGTCCCGGGCCACGTTTGCCCGCGCCTCTTCTACCTGGAGGCT
GCGGACTACATCGAGGAGGACACCGTCGCCGCCGCGCTCGGTGACCTGGCCGTTCCTCCT
AGTGGGGAGGACGCTGCAGGGGGCGCTCATGCGAACACCTTCGTGGTCTCTCTCCATGCT
CTCACGTGTATCCGGACAAAGAAGACAATGTTGTTGTCAGTGACGAACAATGGTGAGCGC
CTCCTGACCCTACTGGATACGGGCTCCACCCATAAATTCCTGTCGGGGCCCATCATGCGC
TGCCTCGCGCTCCATCCGACTGGCGGCGAGCAACTTCGGATTACCGTGGCGAACAATGGC
GAGCGCCTCCTGGCCCTACTTGACACGGGCTCCACCCATAACTTCCTGCCAGGGCCCATC
ATGCGCTGCCTCGCGCTCCATCCGACTGACGGGGAGCAACTTCGGATTACCGTGGCGAAC
GGTGACCGCCTCCACTACCAGGGTGTTGCCCGACATGCCCCCCTCGTCGTCGGCGACGAG
CACTTCGCAATCACGCATCAGCATCAACTTGGGTTGTTTTGACGTCGCCCTTGCGTCGAT
TTTCTGCGGACACTGGGTCCCATTCTTTGGGATTTCGACGCTCTGACGATGATATTCTGG
CGCCTGGGTCGCCGTGTCCGCTGGGAGGGTGTGGGGGTGCTGCCCCAGCGAGCCCCCAAC
CCCAATTGACGGCGACCTTCCTCAACTCTGCGCAACCCCTGTTGGATCGCCTGTGCAGCA
GCACAGCGACCTCTTCGACGAGCCACATGGACTTCCAGCAGTTCGGGCCTACGACCACCG
CATTCACCTGTTGCCGGGCACACCACCAGTCGCCGTTCGACCGTACCGCTACCCATGTTG
CAGAAGGACGAGCTGGAGCGGCACTGCGCGGCCATGCTCGCCCAGGGCATCATCAGACCG
ACCTCGCCGTTCTCGGCGCTGGTGCTCCTCATCTGCAAGACCGATGGCATGTGGCGCTTT
TGCATTGACTACCATGCTCTCAACATCAAGACATCCAAGGACAAATTTCCTATTCCGGTT
GTTGAGGGACTCCTGGACGAGCTGCACGAGGCCTGCTTCTTCACCAAGCTCAACCTCCGC
TCCGGCTATCACCAGGTGCGGCTGCACCCGGACGACATAGCGAAGACGGCCTTTCGCACT
CATCATGGCCACTTCGAGTTCTTGGTCATGCCCTTCGGCCTTGCCAACGCCCCGACGACA
TTTCAGGCATTGATGAACAACGTCCTCCGCCCCTGCTTGTGGCGATTTGTGCTTGTCTTC
TTCGATAACATCCTGATCTACAGTTCGTCTTGGGCGGAGCACTTGCAGCACGTCGCCATC
GTCCTCAACGAGCTTCGGGCGCACCATCTGTACCTCAAGCGATCGAAGTGCTCGTTCGGC
ACACCGTCTGTTGCTTATCTTGGCCATGTCATCTCGACGAAGGGCGTTGCCATGGATGCG
GACAAGGTCGCGGCCGTCGCCACCTCGCCGACGCCGCAGTCGCCACGGGCTCTATGAGGG
TTCTTGGGACTCGCAGGCTACTACCGAAAGTTCATTCGGGAATTTGGGCTCATCGTGGCC
CCGCTCACGCGGCTGCTGCGTCGCGACGCTTTCGCCTGGGACACCGACTCGGTCGTCTCC
TTCCGGGTTTGGAGAAGGTGTTGAAGGCCCAGCTGAGCCGCGGTGTTTGGTGCCTCTTGA
TACAATGGCAAGGCCTTCCGGAGGAGGACACCACTTGGGAGTAGCTCGAGGAGTTCCGAC
AACATTTTCCAGACTTCCAGCTTGAGGACGAGCTGTTTGCGCAGGCGGGGCGCATTATAG
CCGGCGAAGGGCCACGGGCAGTTAGGCCCAATAGCAGTTAGGGGCTTGGCCCAACTTATC
ATTATTTTTATTAGCAGCTAGGAGATTATATAAACTCATGTAAAGACTCGGTTTTGGAGA
TTAAGAAGTAGCAATCATTATTGCTCGGCTTCTGCCGAGACCCTAACCCTAGCCGCCGCC
GCGGCCGTCTTCCTAGCGCGACCATGGCGCCGCAGCGCCGTCGCCCGCGCCCCAACCTCG
CCAGCCAGCCTCCCACCCCTATAACCTACGTCAGCGCCCTGGTAGGAGACCTGCTCCTAT
CAAGCGCGCTGTACAACGCTAATAGCAGACGCTATTTTGTATAGCGCGCTATTTATTTCC
TTGGTGCTAACTGTGTCAGATTAACGCCAGAAGGCATCATGACTCATGAACACTTAAAAG
TGAAGTACTATTGACCTATTTCTAATGTCTGAAGATGCGTCACTACACCACAGCTTTTTA
TGTTGAAATGGATGCGGAGTTGTTTTCATTACCAGAGTTCTTTATCCTTCTTGGTACTGC
ATCACATAATTCAAATATAATTAATATAGGAGAAGATTTAACAAATATAAAGATATGATG
GAAAGTCGTGGGGAACATGAAAATAGGTTGCAACTATTTCGTGTCATTATATCTTCAAAA
AAATGGCAATGAGAAACTTGTACTTGGCTACTAGCTAAATTATGTCCCTTGTTTTCTCGT
AGACGGTGGCACTGCAATTTCAATTTTCAAGCATGGATTACCAGTTGGTGATCGCATAAG
TTAACATATTATCATATACAATGATACTACTTATATATATACTAACCTCAGGGCCGTAAA
TATAGAGAACAGCATAACTTCCAGTGATACTAGTCCGGGCACTGAATAGAAGGACGGTTG
CTAAACCTTCTTCTAGAGGTGCAGCAAGTGGAGCGATGGAAACAAGGCACAGAAAAGCAA
ACGCTCCCATTGACAGTTTGCGACCAACCTTGTCAACCAATAGAGCCGCCAAAATCAGAC
CAGGAAATTCTGTCATGGAATAAACCAAAGCTTTAGCTATTTAATTAATAAATCTCATTG
ATTTAGGAAATGGTATTGTTCCAGTAATCCTGAAACCAGTTTTTAATCCAAACATTCAGA
AATTAAACAGGTATAGGACGAAGACATTTCCAAATCAAGAACAATACTCTGTCTCCCAGC
CCCCTTACAAAATCTACCGTTTTATAGATGACTCTTTGATACTGATTGTATACATTTGTC
TGTGCATGCAAATGAGAAGCACCGGCAAGATCTATGATCACATTTGTTAACCAAACTCGA
TGAATAATTGTAGAAATAGATAGATAAACAAATGGATAGAAGATCGAAGATAATAATTGG
CTATTTGTCAGAAGCTTTTTACGCACTTACCCGCAATACTTGTCACCAGGACATCTCTGT
AGAGTCTGGCATCATTTTGCTGCCAGAAATGCATACCAACAGGTCCACATCTCCTTGCAC
CATTGCTTAGTTCCGATGTTAGCAATACTATGCCATAGTAAGCAAAACAAAATGCAAAGT
AGACAAACCAAAGAAGAAGTGTAGATCTAATCAGGCTTCGCGACACAAGTGTGCACAATG
CATTAATAGATCTGGATATAGAGGAGCTCATGCACACGTTAGTTGCAGCACTATCTTGTG
AAAGAATTAGCGGTACTATTGTCTCCAGATCAACAACATCATCAGACCTTCTTTGTGGGA
CAACTATTAAGATGCCAGAGGGCAGAGCCATGTTGTTCATTATTGCTATTCTCTCCAAAA
TAAATTGAGCATCAGCTGTTCTACCTCTTGAGCAGAGGTACCGTGGTGATTCAGGTGTTA
TACAGTAGAAAATAAGCAGAATGAAACACGGTGTTGAAGACATCGCTATCAACCACCTCC
ATCCAAGTACTGGCATGATAGCCTGCAATGATCATAGATGTCATGAGTAGTTCCAGTTAC
CAACCATATTTGTGTCTCCTCTGGCTAAAGTACTGATTCTTAATGATGGGAAATCAAATA
ACTTTTTACTAACAGAACAAAGACATGGAAAACATTCTGAAGTGTATTATATGGCACATT
AAACATTACTGTTAAGACCCAGGAGACTAGGACTACAATTAAAGAAGTCACCTTTTAGGT
TAGTCATCCTTTTTTCCTTTTAAATAGCTATTCTCTAGGATACTTTCCTGCTTTTAATAT
TAAAAGAAGAAAACCTAGAATAACACTAATAAGTAATGTAGACTAACAAATAGAGTATGT
GAAATTGTAAATTGACAGTGCAGACTGATAATTGGGCTCTAAAGGGCAGGGAAATTTAGA
AAATTACCCATGCAATAAGAGCCTGAAGGATTGTTCCGAAAGTCCAAGTACAATGGAAGA
CAACCACCCAAGTACCCCTATTTGCAGCAGGAACAAACTCTAGGAACCAAGTACCAAGAA
CATGACCAGAACCCAATCCCATACCGACAATAAAGCGGAGGGATAATAGGCATATGTAGT
TAGGTGATAAAGCACTAAGAAAACCAAATATGCCAGTGACAACAGCAGTGAATAGAAAAC
CAGCCCTGACGATGGAAAACAAAATTAAAACAATCTGTTAGACTAGTTTTGGGGAATCAA
ATACAGACATTATGAGGTGCAACATGAATCTTCAGTTCCCTTTTCCCCTCAATAATTCAA
AGATGAATTTCAGTATCATTTGTGCTTAGCTACACTTCTTCAAGAAAGCAGCTTGCTTTG
CTTCACAGAACAAATTCACCATGATATTCCCCTAAAGTTTACTTCATATAGATGAAACAG
AACCCTATATGCACTGTTTTTAGGAAAACGTTTAGAATCAACCGGCTGATTTCTCTGCAA
ATCAGCCGGGTCTTCCGCACGCCACGCGTCGTGGTCCACGCACCACGCGAGACACCCACA
TGCTGCCTCTCCTGTTTCTTTTTT