Contig Data
morexGenes
Links



Map Locations of contig_6090 (5338 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_6090

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72018 3 1935 bp AK369212 Available Available None





CDS Structure of MLOC_72018






Contig Sequence (5338 bp)

>contig_6090 5338 assembly3_WGSMorex_rbca.fasta
GGCGTGGGTAGGCGGTGGGGAGGTACAGGAGGAGGCGACGGAACTGGGTGGTGCCGACGA
CGGGGTTGGAAGGGAGGCGAGGGCTAGCTGTCGACACTGTTAGTAGGGGTGGAGGACAAA
CAATATGCCATCGATTGACGGACCAGGGATGGAGAAAGCGGACGTCGTCCGTGTCCTTTC
CGATCCAAATCAGGCTTAGAATTATATTGAGAATGGGTCAGCAGGCGGACGAAAAGCGGA
CGCGCGTCCATTTGGGTTGACGCGTTGGGTCGTCTTTTCTGTTCGCATGGACCCAAACGG
ACAACGACGAATGAAATGGGTCGTTCATTAAAGTTGCTCTCAAAGTTCAAAACGCGGAGG
ATTTTCCATGGGGTGACTCGGGTCGATTTTCGCGAGGGAAGCAGCCTTTTATCACTCACA
AACAAAAAAGGCAATTGATGTTTTTTTGGGCGCACGTAGGTGCAGTCCTTCAGATGCATT
GATGGAGAACCAAGGCGCATCACATGACGCGACGCCATCACGCCCGGAGCGAGATAGAGA
GAGAGAGCGGCAGTAGGGGCCGGCCATGGAGCAGCAAAAGAAGCAGGCGCGATGGTGCCA
CACTGGTGCATCTGCCGTCTGGAGAGGTCGATCGTCTCCTTGGAGTCCGTCGCCGTGCCA
TCTGCCATGCACCTTTCGTTTCGATTGGGGCGCACACCCAAACATTGCTTCACAGAGCCT
ATCAGCAGCAGCTAGCAATGAATTGAAGCGAAGCGGATTTGAAAAGTCAGAACCCGGCGA
GCTTGCTATTAATTAAATGGAAGGAAGGAGGGCGCATAAATGGGCTCACATATCTCCGGA
CACGAAAGCCTGAGCTCCCCATGCATCCTCTGTCTCTCTCAGTGTTTCATCGCCTGCCCT
CCTGCCCGCCAGCAGTGGCGCACTGGTACTGTCTTCAGAAGCCCTGTTCTTGTTCGTGCA
GGTTTGCAGCTGCAGCGCGGCCGGCCAGGACGCAGTGCACCTCCCTTCCTGCTTGATCAT
TTATGCTTACCGCAGTGCACACAGCCTGGCCTGCCACATTACTCATTTATAGCCTCCACT
GACGTAAGGCCCAAAACAAGCCGGAAACATGGGGTGCATTTGATCCAGGACGCCTGTCTC
TGCCTCCCATGTTTCCTTCTTCTTTCAGTTAAAAAAAAATGTTCTCTTCTTCTTCAGCTC
ACCCCACTCATGCATGCCATGCCAGTACGAGGCTAGAAGCAGGTTGGATGAAGTAATCAT
GCCATGTTTGCTTCATCTCAAACATAGCACAAGTAACCCCAACAGGTTGAGTGACATTTA
TCGATTTTTGTTCCTGCCAATGCGGTTCAATTATTTCGCAACTCAGGCAGTTATACATGT
TACATACAGTATCTCCTTATTTGGTTCTGTCCCCTTCTCGCACATTATCTCATCATCTCG
CGATCCGAAAGCTTGAGCTTGCCTTCCCAATCGGCGGCTGTTGCTTTCACGGATCACGCC
GGCGCGAGCAATGAGGACAGTCTACTTGGAACCCGATCCCTGGACGTCTACCAGCTGATA
AAGATCTCCACGTCGTTGGTGTCGCAGAGGAAGGAATTGCCTGAGAATAAAAGGATACTG
GTAAGTGATGAGATCAAGCTGAGAATAATCAGCTGCGTGGAAAAGCACGAGATTAGTTCT
GCTTACCGCCTCTGCTCAATCAATGAATAGTCAATCTCTGCTATTATAGTTGCTTCATCA
TGCTCGGTTGTGGCGATCACCTCGCCAAACTAGAAACAAAATGCCAACAGTTAAGCGTGA
GATATAACCATACACAACTGAAATAGAGCTTGCAGAATGTGGAGTGTATGGAACACCATG
GGTCAAGGCAAAATCACTATAACATAGTAACATACTATTCCTTGTGTTTGTGCTGAGTTT
AACTTCCAAGTCTGGACTCCGGAGCACAAAAGATCTGGAGGCTCCTGGCAAACTACAGGG
GAATTGGGATCTTAAAATCTGTAATCAACTCACCGGTCCAACAAGAGTGGAATGTCCCCA
AGCAACATAACTTGAACCGGTATCTCGAGCTGGAGCACAGGTTGCAACAAAAAGCTGACA
GAATAATGTTTGTTACTATTTGAAAGCGAAAACTGAAAGTGGAAATGGCGACTTCCTGTA
CAGAAAAATGGAGGGCAGCACACCAGTGTTGCTCATACCTGGTTGTCAGCAGCCCTGGCA
TCATAAAGATATATTCAGAACAGAAGCAGAGATGATGTAATGCAAAGTAAATAGGAAAGA
TGCTTCAAATGGTACTTATAGAGAAAATTTGACACAAGTGTTGATCTTTTGACTACATCT
AAGCTTAATTTAGAAGTACATTATCATCAATACAAGTACACGATATTTAACCTCATTATG
TATCTCCTGCATATCATCTCTAAGTTCAAATGCTTCAGACGATGCATACCTTGCCCGTTG
AAGCAATTCCCAGTGCAATGGCCCAGTAGTCATGTTGAAAGCACCAGGATAGCATAGCAA
ATGAGCACCTGCAGTCAACAAATGAGCATTATAATATTTGTATGATCAACAGTGAAGTTG
CATGTTTTATGGTATTAGCAACTAAAAATCTAGAAGTGGCGCTCTCCCAGCGGCAAGCAA
CATGAGTACTACAGGGTCTGCAGTGCATGAAAAGTACATACAGTTATTACTAGCAAGTTT
CAACTCATTTAGTTGAAAGGTATCTATTGGGCTGCTATGTCATAAACTCGTAATATTTGG
ACCAAAGATATTTCGACCTGATTTTTACTAGAAAGGCAAACAAAGTACACATATCTCATA
ACTTGATAGTCAATCATACTAGTTGCATAGGTTTAAGATTCCTCTTTTAGACACGTTTCT
TGGTTGTCAAACCATTCATCTATATAAGCACGTGATTGTATCTGTTATTTACGAAAGAAA
AATAAATAAACAAACTATCTGTCAACTTCCCTTTTCAACCAGGCTTTCAGAGCCTTGCCA
AACATAGTGTAGAAAGACCCTCCTACCAGCAGATCCTTGATTAACCAGGCCGATAATACA
AGTAAATACCACAAATTAAATCATATTTCGCTATGAGTTCTGAGACCAAAAAAATGTGAT
CCATTACGCACATACATAGTAAGTTAGCAGCTGCTACGAACCACATGAAGTGGCAAATGG
CATAGCATTAAAGCGATCCAATTAGAAGTATTCTGTGATGATAACACTACAAACATACTC
CCTCCGTTCCTAAATATAAGACCTTGTAGAGATTTCACTATAGACTACATACGGATGTAT
ATATACATAGTCCATAGTGCAATCTCTACAAGGTCTTATATTTAGGAACGGAGGGAGTAT
AAACCATGTGTAAACTGTAAAGATAGGAAGTGAGAAATTTAGACCTCTTGCAGCATACAA
CATTGCCAATTCCTGGAAACGAATGTCATAGCAAATGCCTATACCAATTCGGCCCACATC
TGAAAAGAATCAACAATATATTAGATTTTATATGTGACAAAAATAAAAATACTTGTGTCG
CATCAAGAAAAGAAAGCAGAACAAAGATGATGAAATTCAATTAGCTACAGCAATTGCAGA
AGAAATCTAGAGTAGAAGTAAACGAACAATCAGCATCGAAATCTTAAATAACATATCCAT
AGGAGATTATGAAAGCAAAGAAACATGAGCAGACCATATGGAGGTCTTTAACAATATCAA
CATCAGTCATAAACATGTTCCGTGTGTAAACCTTAATTCGATGACCCAGATTTTGTGGTT
TCAGAACGAAGATCTTGTGTTTTGAGAGCTACCTAATCCTAGTGTGCTTTATTACAACAG
AGTAATAAGACAAACCTGTGTCAACAACAGTAAGATCTTGCCCAGCAGTAAGAGTTTTTG
ATTCCTGAAATGTAATCTTTCCTGGAATATCAATGTCGAAAAGATGGACCTGCATTCATG
AAAAGTTCCATTGCTGTGACATATAAAACATCAAGGAACAGCCTTAGGAATAATATTGTT
CAGTGTGGAAGAAAAAAATGCCACAAGGCAAAAGTTAACTAATCAAATGTTTTAAATAAG
TAATTTAACTATTTTTCTTGTCTAAATCGGCAAATTGATAAAATATGTGTTCTTGTGACT
TCACAAGAATATTATGTTTTACATTCGACGGAAGAGAATCACTGTACTGTGTGGACACAG
CATGATTGATGTACTAGGCGTTCTGAGCATGTTGGTAGTACTGTACAAAATAAACTGCAC
TTCTGAAAATACCATGGCTTTTCAAACATAGTTCATCCAGTTGGCATTGTTGTCTGTCAC
TATGACATACTCTGTCTCTTCATTCTTCAGGTACTATATAAACAAACTACTTAACAGAAA
TAAGTTTGCACACTTACCTTTCTATGTTTACCCTTAAGCTTGCCATCTGAACCAAAGACG
CAGCATGTATTGTACAAGCTGTTACCAGAACGTTCTGATATGGATCCACCAACAAGAGTA
ATTTGCAAGCTGCGAGCAACATCAGACATCATTGAAAATGACGGAGCTGCATCGCCACCA
GCCTCAATGTCCTCAGCATACTCTGGAAAGCTGTCATTTGAATATGGACCATTCCATATC
TCCTACACACATAAAAATAGGAAACTGCAACAGGTGAAAGGTAATAAAAAGGCAAAAGTG
AATTGTCAAAACAAAGGTAAATCATGTAGTACAAGATGTGGAAAAATGATACAATGGTTC
AAAAGTCAAAAGCTGTTTGCGAAGAAAAGTAAGAAACTGAACTATGTTTATGCAGCTAGT
GATACTTATCCTAATTAACTTATAATTGGCCGGGAAAAAGCGTGTTGGGCAACCTACACT
GAAGTGGGTGGTGCCAAAACCTATTAATGCTGCATTATCTTTTGGCAATTTGATATTGAA
AATAACAGCAGTATACCACAAATTTCTAATTTGGCTCGTGACCGAATGGATGGTAAATGC
CTAGGCCTCAACAGTCAATACAACAGTGTTGGTAACTGCTAGAATACTAACACAACACAG
TGTGAATTAGTGAGCCTGCATCCTTGTAATGTAACTTTTAGAGCACATGACAGCTAGTTA
TATTGAAGTATCAGAGATAAAAATGCACATGATATAATCCTCTCCCCTTGGCGCATAGCA
ATGCTACTCACGCTTGAATCTTATAGAATCGCCAGTCAATCATCAAGGAAAACGAGGCTA
CGCTAATATGCTTCTGCCGATAGGTTTCCTCTGAATCACGACGTTGTCACTCTATACAGT
CAGCAGTGAGTCCTCGACGGCCCTCCCATCCGAGAGGAAATTGCTACCGACAGAGCTG