Contig Data
morexGenes
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Map Locations of contig_60861 (3964 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_60861

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_72002 1 1342 bp MLOC_72002.1 Available Available LOC_Os05g36900.1, FRAME:-3, EVALUE:2e-117, 13105.m03827 protein dof zinc finger domain containing protein, putative





CDS Structure of MLOC_72002






Contig Sequence (3964 bp)

>contig_60861 3964 assembly3_WGSMorex_rbca.fasta
GGCAACTTGCCACCGATAAGTGAAACTCGTACCGGTTCGTGCGATATGTCTCTCTCTCGC
TCGTACGATTTTTTTGCTCCATAATTTTTCTTGGGTCAGCTTATCTATACGAAAATCCCA
ATCAGCGATGGAAGCCAGAGTTTGGCTGCCGAACACGTTTGACTAATCGGGAAAGCTCAG
ACGGAGTGGGAATCAGCGAGTGGAGCGCGGATTTAAAGATTTGGGGGAGCTAGGCTATTG
CCGAACAGCTCTTAGAGCAAGTACAATAAGGTACAGTTAGTAGGCTGTAAGATTAAAATA
CTATATCTTTGCTGAGTTGGATTAGAGAGAAGAGGAGAGAGAAGGGAANNNNNCTCTTCG
TGAAGAGCCAGCTCTAGCACGTGCTCCTAGGTGCTTTGTGAGAATGAAAGGTGGGCCATA
TATAATAAAAGTAGTACTTTTATAGCTAACTATTGTACAAGTTAGCTATAAGATGGGCTA
TAAGACTTCGTATAGCCAGCAGTTGGCTATACTATTAACCATGCTCTTAGTTACACTTGC
ACCTAAAAGTTGATGAACATTTACTCAATATAAACATCTACCCCCCCTCTCTAAAGAAAT
ATAAAAATGTTTAGATACTTATCTAAAATGCTTTTATATTTCTTTACGGAGGGAGTATAA
CTTATTTGGTAGATTTGTATTCTGCGTAGGCGTTGTTAAGAAAATCTGCATTCTAACCAG
CCTGAAGTACGTGATTGCATATATAGTGTATATGTATGTATATGAAGTAACTGAGTTTAT
AAAATGCAGAATGGAGAAGCCGAATTTGAAACGATCAAAATTCATATTCTTACGTTTCAA
TTTTTTAGAGACATAACGTACAAGTGTGTGATTTTTCAGAACAAAATATATTAAAATGAG
TGCTACAAAAAAAAAACAATTCTGCGGCTTTTTAGTACATGCACTATTCATCTTCAAAGT
CCATGATTTTTTTTACAAAGCTCACATTTCAAGGAATTCCTTTCTACAGTTTTACACAAA
TACACGTCACATCCATGTACAATTTTTTCAGATTATTTTGAAACTGAGAAGTTTGAATTT
TCAAAAAAAATAAATATATCAAAATTCTTGACCTCTATGGTGGCCGAGCTCCAAATCGCC
CTACTCATGAATTTACCCCTTTTGTTGTTTAGAGGAGACAGACGTAACTGATCAAATTTT
GTACTCCCATTTCTAGATTGTGGGCCAATTAATTATGTGGATCAGATAAAAGCCCACCTG
CACTGGAGCCCTGGATTGCAAGATTGGGCAAATTATTGTCTGAATTGGATTGAAGCCCAT
GTCCATGTGAATGCAAAAAAAAAACATTGATCAATAGTCCTTTTTTTTAGAACATCATTA
GTCCTTTTTTAGGGAACATTGATCAATAGTCAATACAGTTACAAAATCAATTTTTCTGAC
GCCCTTTTTACTTGGTTTTCTTTCTTGCAGACACAGTCCGAACTCTGCTTCTATAGGGTG
ATCACAGGGCTTTACAGGGATCAGCCAGAGCTAGGGATGCAAATTGGGCGTACTGGCCGA
CGATAGAACAGCATAAATAAGGTGTAATTCTGAAGCATGTGCTGAATTGATTAAACGCTA
ATTTATAAGTTCCGCCAGAGCACCACTCCACAGTAATAATACGAACAATTCTGTTCTGGA
GTTCTTTTGGAGGGCGTATGTGCGTGCAGGGTGCGGCTGGTTTGTGATTTCCCTTGGTTG
TTACTCTTGTTTCTTCTTGTCCTTAGATAGAAATAACCGTGGCCACGTTGGTAATTTGTT
GAAGAGGATGAATAAAATTCTTCACCCCCGCAAAATAAATAAATGTTGAAGAGGATGGTG
AACGCTTGAGCTCGAGCCGGCAATGATGGGATCCATACAGCACCCTCCCACCGCCCTAGC
CGCGAAATGGATCTCGGAGCTGCCTGTCCTGTTGTAGCAACAATAATTGAGGCGTGCAGG
CATGGTAAATCCTCTATAACTAGCTAGGGCCAAATGTCACCTTTCAAGCGACTAGTGGAA
GCTGTTTCATATTGTTAGCTACGTCCACGCCGCACCACAGGGCATGTCGTTGGAATCCCA
GTGCACCATTCATTCACCAGCATGGCATGGCACCATCAGCATCAGCATGTGTACATCGTC
CACACCCAGCTCAGGGCTCAGGCAGTGCATACAAGAACAAGGGGAAGAACATTGATTTTT
TTTTTTTTTTTTTTTTGCGAATCTGGAAGAACATTGATTGATCGTACTAGGAAGGAGTGA
GCATGTAGCTCAGAAAAGGAAAACCCAGCTGTTAATAGTAAGTATATTGCCAATAATAAT
ATCAACATTATTAATATTACATTACATCCTTTTTTTTTTTATCCAACTTGTATATATATA
TACTCCTTGACCGTGAAGAACACATCATATAAGTTACTTCTGAACAAGGGTAAAATAAGG
GGGAGGAAATTCGAAAGAAGAGACGTGGAATCAATCACAAGAGCGGCATGCATGCAGCGG
CGATGGAACAAGCTGGAAAATGAGCTCAACATCGATCAAAGCCTGCAGAGAGAGCAGCTT
CCAGCCCTTGGCAGCCCATCACCTTGCTCCACACATCGTAGCCGCCGGCGACGCCTTCGT
GGAGGCTCATGGCGTCCTCCTCGGGAAGCGAATTGAACGGCTCGTACTTGGCCTCCTGGC
CCCACGCCGACGGGAGCATCAGATCGCCGCCGTCCGCTGGCAACCCCAGCGAGTCGTAGC
AGCTCTGGTCTACGCCGAAGTTCAACTCGCCAAGCGCCTGCGCGCGCGCGTCGCCGCACT
CGAGCATGGTCGTTTCGCCGGGCTCCGTGCTGCTCGGCGCCCCGCAAATTTCGCCGAAAC
CGTGTTGGCCCGGGCTGGATAGGGCCGGCGGGCTCATCTCCGTGCTTGACCCACTCGAGG
GGTCGGCCGATTCCGGCCCGACGGCGCGCTGCTCGGCGTGCGACTGATGGCTCAAGAACT
TGGAGTAGAGCACTGCCAGATCGATCGTCGAGCCCTCGGCGGCTTCGGTGGGCTTGTCGG
CCGACGCCGGCTGGCCGAGCTCGGCCGGGTTGCCGACCATGCCTTCTAGGAGCAGGTCGG
GCCGGACCGGGCCGTGGAACTGGTGAGAGAACGCTGCTGCGCCGTGGTTCTCGGAGGCCG
TGTCGGCCAAGGGCCGCACCGGCTTGCCCCGCCGGTTCTTGCGGCAGCCGCCGCCGACGG
GCACGTTCCGGAGGGATCCGCCCTTGGTCCAATACCGGCGGCAACCCTTGCAGAAGTAGC
GCGGCTGGCTGAGGCTGTAGTTGTTGTAGTAGCAGAACTTGGTGTTGGGCGAGTCGCAGC
GAGGGCAGTTGGGCGCCACCTCGACGTTCGGCCGGTACCGCCGGGGGTCGACCAGCATGG
CGCGCCGTCCGGCGGCGGCGGCGGCGTAAGCCAGCATGCTCTCGCAGTGGGAAGACAGCA
TGGCGACGATGGATATGGATCGCAGATCGAGGAGGAGATCCGCAAGCAGGAGAGCTGGGG
GAATGTAGGAATGCGGTGATGTGAGAGGATTTGGAAGCTTGCAGATGCGAGAGGAGGGGG
GTGGAGGGAGGCGTATTATATATACGTGGGAGAGCGGCCGAAGCCAGGACGAGATTTTTT
CTTCGGTTGGTAGGCCATGGTGCATGTGCATGTGATTGTGAGTTTGCGCTGGTAATTAGA
GGGTGTTTGTTTTCATGGATTATTTGTTTAGACACTTAAAAAAGTCTTAATAAATTCCAT
CTAAACCAAACAGGAGGGACTTATAAGGACTTTGATCATTTGAGACTTATCAAAAAAGAT
TCTCAGGAGAAACTTATTGGGACTTATCGATCGGCCCGCACCTACCCCGCATCGCCCCGC
ACCTACCNNGCCTCGCTCGTTCCCCGCCTCCTCGCCTTGCTCCTTCCCCGCCTCGCTCCA
ATCG