Contig Data
morexGenes
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Map Locations of contig_60761 (3904 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_60761

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71949 1 740 bp MLOC_71949.1 Available Available None
MLOC_71950 4 1867 bp MLOC_71950.4 Available Available LOC_Os01g58194.1, FRAME:-2, EVALUE:0.0, 13101.m06178 protein protein disulfide isomerase, putative, expressed





CDS Structure of MLOC_71949






CDS Structure of MLOC_71950






Contig Sequence (3904 bp)

>contig_60761 3904 assembly3_WGSMorex_rbca.fasta
CTCTGTTAGCCTGCATGCGATATAGCGGTCGGTTGTTGCCTAGATTGTAGAGTAGTGGAG
ACTAGAGTAGTGCTTGTAGGTGGGCTAGTGGAGGCGAGTAGTGCTGCATGCATGATCGGC
TCCCTGGCTGTCTAACTGTATATAATACCCCAGCCTAGAACTTAATCAAATGTGTTGAAC
ATAATCTCCTTCTCTTTCGCTAAACAGCAGCCAGCCATCCGTAACCAAGCGACACTGCCC
CATTTCTCGTCTATTCTACTGTATGAATTATCATCAGACTTGCCACCTACACAATAGCAA
CATGACCTTCTTTTCCAGAGCACGCACACACAACATCCGTTCATTTTAATCTATATACAT
AATATACTCCAGTAATAATAGAGTCCCGTAATCGTCTACTGCTCAGCTCCCACGGCGCCG
CCGTCTTCCCCGTCTCGGCCGCACCGGAGGTGTATCTCGTAGCCGCAGGCGATGCACTGG
TACGCCCAGCCGAACCCCTGCTCGTCGCACTCGCAGCACACGTACGGCCCTCCGCCCGAC
TTCTCCGACACGACGCTCAGCTCGTGCCGGTGCCCGGCGTGGCGCAGCGACGGCGAGTAC
CCCTTGGCCCGCTCGTCCTCCAGCTCCTGCAGCCGCCGCACCTGCTCCTCGGTGAACGGG
AACGCCATGTCGAAGTAGAGGTTCACCAGGTTCCTGCCCTCCCTCGTCACCGTCTTGCCG
TCGGGCCCGATCACCACCAGCGTCGGGATCTCCCGCACGTCGAAGTACCTGGCGAGCTCC
CGCGACGGCGCGCCTTCGCCGCCGTCGTAGGGCAGCGCCGGCCACGGCATGTCGCCGCGC
GACCGCTCGTACCCGCCCTCCTCCTTGTCCATGGGGATGTACACCACCTCGAACTCCGCC
GACCTGCGTTTTAGATTGCCGTAGATGGCGGCCAGCCTCTCGGTGAACTTGACGCACGGC
TCGCACCCGTCCGCCGAGAAGTAGAGCCCCACCGTCTTCCCCACCAGGCTCGCGATGGGA
ACCTGCATGCAGCCCTTAGCCACGGTGAGGCCACCCGCTGGACGCATGGCACGATCAATG
GCGATGCATGCGAGCTAGCTCGTGATCGTTCGACACCATGCATGGATGCAAGCATGCACC
TCGCTCGCATTCTAGACTAGAGCAGAACAACGTACACTCGGTGGTGGTAGTACTGACACT
ACCTGTTGGTCGCCGCCGTTCTTGACGTGGCTGACGGAGAAGAGCTTGTCCAGAGTCTGG
GAAGCGAACTTGCTCCGCTCGGCGGCCTCCAGCTCCGCCACCCTGGCCGGGGTGAAGGGG
AACGCCGGGTCGCCGTAGCGGTGCACGAGCTCGACGGCGTCGGAGCAGACGACCTCGGCG
CCGTCCGGGGCGAGCACCACCAGGCGCGGGATGCCCTCGACCTGGAACATGTCGCTGAGG
CTCTTCTTGCAGGGGATGTCGCCGAAGGGCACGGCGGGCCACGGCATGGCGCGGTGGAAC
CGCTCGAAGGACGGCCGGTCCTCGTCGCACGACACGAAGACGACCTCGAAGCCGGCGCCG
CGGCCCCTGAGCTGCCGGTACGCGGCGGCCAGCGCCGGGGTGAAGGCCTCGCACTTGGGG
TACCAGTTGGCCGCGAAGTATAGGCCGATGGTCTTGCCCTCTAGCTCCGGGAGCTCCACC
TGTGAGTGAAGATTTTTCAGAGGACACGTGTTCGCTGGCCTTCGTCAGGCGAGTCGTGGT
CACCGTTCACGGAAAAGGAAACAAAATGATGGCAGGAGAGAGAGGAAAGGAATAGTGCAC
CGGAAAAGAAGGCCGTGTAAATGTGAGGCGATTTTTTTTTTGGATAGACACGTGTCGACA
GGTACCATAAGTATTCTGATTCTCGACGTATTTTTTTTGACGGGTCATTCTCGACGCATG
TGGTAATGTAGAAAAAATTAATAGGGAATAGTTTTTTAGGGAAAAAATATTTTATCAAAA
GTAAAAATAATAAAAAGGAATCAGAGAAAACTGCATGAGTTTCTGTGTAGAAGTTTAATT
TTGTAGGCTAAAATATTATTTTCTACTCCCTTTCTAAATATAAATCTTGGTTTCGTTAGG
AGACTATATATTATGTATATAAACGAGTGCGGACGTTTGGAGCTCGGCCTTCGTGGATAC
TGAATTTTTTGAATAATTCAAAATTCAAACTTTTTGATTTTAAATTTTTTTGAAAAAAAT
ATGAAAGTAAAGAAAGATGTTATGCGTATGTGTGCAAAAATTCAGGATGAAATACCTTGA
AATACGATCNNNNNAAAAAAGACAAATTCATGACTTGAAATGATGAATAGTGTCATGTGT
AAAAAAATCTTAGATTTGTCTGTTTTGCACAGCCCTCATTTCAATGTATTTTTTCTGAAA
ATTTATCCACATGTGTGTTACGCCTTCACTTATCCCTGTATTGTTTTTCATAATTTTTTG
AAATGTAAAAATATGAATTTTCATGAAATTTGAATTTTAAATTTAAAGGCCTCCATGAAG
CTCGGTCACCAAAAGCAATTTCCGGTATATAAACATAATTTAAAGTGTAGATTCATTCAT
TTTGCTTCCAAAACTATCCTCCAGAGATCGCTGAGGCAATTTGTGTTGATTGTACTCTTA
CACGAGTTTAATTTAATCTCTTTTTCCCCGCAAAACAAAAAGATAAAGCTTGAAAGGCTT
GCACTTTTTTTTCCTTAATCATGTATAGAAGCACAGACAAAGCTTCTTCACTTTCTTGGC
TATGCCTTGTTTGAGAGAGGTTCATCGTGAAACGCATGGTTTAAGGGAAAAAGCTTAAGT
TTTGGATCGTTTAAGCTGACCTCCCTCCTAAAGCCCTTGGCGTGAAGTGTTCCAACTTCA
ACTGGTGCTAAACTGAATCTCGGCTACTAGTTAAAATCTGAGCTTTTGTCCGACTGAATT
TAACACGAAATTTATTTAGAAGTTCCCTGTCCTGCGTGATGAAACCAATAGAAGAGATCT
CATATCAAACCCGGATAGTAGATAGAAACAATCATTCTGCTCTAACCGACGAGGAGGAGC
AAAAAAGAAACTTGCAGCCGAAGACGAAGAGCGAAGCAAAGAAGATCAAGAGCCAAAGAA
AAAGCAGCAGATCCATGGAGCTGGAGAAGCACCTCGTTCCCGGAAGGAGAGATGAGCGAG
CCGAGGGGGAGCGCGGAGCGGATGCCTCCACCGCTCTCCTGTGCCTCCTCCATCCCCGGA
TCTCCGACGATGTTCGGTGTCCTGGTGGTGACCAGGCACTTTCGATGTGCCGCCTGATCC
ACGGCACCGCGTGCCGGATAGGAGCAGCAACAGAGACTGGGAAGGTGGTGTGGAGCAGCC
TGCGGTGGCTTCGTGCTCTCAGAACGGCAGCAGTGACTGCGAGTCGAGTCTAGCGGCTAC
GCCGACCCTCGCCACACCGGCCAGCCACCGCGGCAATGAATAATGTAGGTATAAAAACGG
GGGACGCCGCATCTTGCAGACGGCGAACCCTTTTTCTCGGAGGCGTTCCACGCGCGTCCG
TCCGTCGCAGCGGTTCCTTTCAGATCAGGAGGCGCAGTGGCGGGCTGGCGTTGGAGCAGC
TGTCGAACAGAGGCGACGATGCGGAGCCGGTCTTGTTGGCGTGTGGGGTACTGTACCTGT
ACGCGGGGCTAGGTGGCCGGACACGGTGGGGTGGGAAAGGGAGCGACGCGACGCCCAGTA
GTGCGCCTCGTGTCCAGTCGGGGGTCTGGGAATCGCTCGCAGCCAACAACGTGTTCCGCT
CCATGCCGCCTAGGGTCGCGCTCGCCGTGGACTCTCTCTCTCTCTCTGTCTCTACCTCGG
CGTCTCTCTCTATCTCTCCCTCTCTCTGCCCCTCTCTCTCTCCCTCTCTCTCCCTCTTCT
GTTC