Contig Data
morexGenes
Links



Map Locations of contig_60692 (4050 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_60692

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71900 1 520 bp MLOC_71900.1 Available Available None
MLOC_71899 1 705 bp MLOC_71899.1 Available Available LOC_Os02g09980.1, FRAME:+2, EVALUE:2e-33, 13102.m01101 protein expressed protein





CDS Structure of MLOC_71900






CDS Structure of MLOC_71899






Contig Sequence (4050 bp)

>contig_60692 4050 assembly3_WGSMorex_rbca.fasta
TTGATTTCTCAACAAAATAGGATAGGACTGACTACATTAGTTAGGTAGCTTATTATTTTA
ATAATTATAAAAAATTAAAAATGTGTAGTATTTTTTTTCTACCGTTGCAACGCACGGACA
CTTTTGCTAGTTTGATAGTACAAAGGGAGTAATTCCGTTCTGTCTGACTGGCACCGCTAA
TCCCGTGCTTTGGGCTTCTCTCCCCCGGTACGGGCAGTGGTCTCCAGCGCGACCTAGCTA
GCTACGACGGCGCACGCGCGGCAAAAGCCTACCTCGACGTGTGAGCCGCACCGCATCCCT
TCCCGTCTACTGATCGCACACGTTTTAGAAAGCAAATGCGGCGCAGCAGTGGCGCATGCA
CGGCGGCCATCTCGTCACCAAACAGGAGAAACCGGCCTGAAAGTGGAAGGAAAACCCGTC
GGCCGTCGCGTCCCGCAGGCCGATACGTCTACCGATGCGCGCACCAGTGCCGGTGCCCCC
CGCAAAAAGCGCAAAGCGCGGTGGCACCTGAGCTGCGGCAGCAGATGCGTGCGGCGGAGG
CGACACCGAGGGAAGCCGCGGTTTCGTGCGTGACGGGCCCGCGTGCGAGTCACTAACTCG
TACTCTACCGAAACGTACGGTAACACATAAAAGTGGTGAAAATATCCGCAGAATCCAGAT
ACGTACGTAGAGCGTTCCAGGTCGTATGATAGCGTACACATCCAGAAAAACAAGGTGCGG
CGATGCGTTCGGCTCGCCGCCGCGTCAGCGCCCACGCGCCGACCCGGCCCGGCCTGACCC
TTGTTTTTTGTTTTTTTTTCAGTCACCGTCCGTCCGTCCTGGACTGCTCGGTTTCGTCCG
TGCAGACTTTGCGCCCCGGTCCCTGCAGAGATGCTAATTTACAGCAGAAAGAAAATCAGG
TGGCTTTCTTTCTTGGGGGAGGGGCTAGGCAAATTTATACTCGACGTGCTTTTAGTTTGT
TGATGATGGCTATAAAATTCACCAGGTTGACTTGAAAACAAAAATATATTTGCTGGTCAG
GCTGACTTTACTGGAATGATATTAAAACTAATGGTAGAGCTCCATGTGATATCTTTTATA
ATTTATTGTCTTGTTTGTTGCGGGGTGGAGACAGCTACAACGCATTGGGTTCGGCTCACC
GCACAACAAATCGCCTGTCATAATATACTTTGCCATATACTATATTTTGAAGAACAGAGG
TAGTCCAATATTTACACGCAGTCTATGAGCAGGTTTTTCACTGTCAAGATAACATTTATC
TTTTAGTGTAAAAAAATTGGGTGCAAGCACGCCATTTTTACTAAGTAAAAAAGGGTCATT
TGCCGGTTTTCGAACAACATACGATGTTCCCGATGGAGACATAGTATACACATCAGTTAA
GTGGCAGAAAAGAAGATTGCTTTGGCATAATAAAATATAAAAAAGAAAGCAGTCCTCCTC
CTCTCTCCGTCACCAACCGACGTACGTGAGAAATTCAGAATCGAGTACGCAGCAAGACCA
CAATAACACAAAACCCAAGGGAGCGACGTGCATAGACGGACGTTTTAGTTCGATTCCAGG
GTCAACCTTGTCCCTGTACTCGTACGTACTGTCCTACACGTTGGGCGCCTACGTGGTCTA
TATATATGCATCTTCTTCCCTCGTCCCGTCGTCACCAAACACAAAACCATTTCATCCCGT
ATTCAAGAAACTGTGGATGGGATCAGGTCTCTCTCACAACCACCGGAGCAGCGTCGCGCC
TCAGCAGCAGCCGTCGTCGGCCCGCGTCATCGCCGCCGACGGCTCGCTGACGGAGTTCGC
CACCTCCGCCTCCTCCTCCTCCCCCGTCAGCGTCTCCGACGTCCTCGCCGCAGGCAATGC
GGGCGGTTCGTTCTTCCTGTGCAATTCCGACGCGCTCTACTTCGACGAGGACGTGCCGGC
GCTCGGCGGCGGCGAGCTGCTCCGTCCCGGCCAGATATACTTCGTGCTCCCCCAGGCGAT
GCTCGGCCGGCCGCTCTCGAGCGCCGACATGGCGGCCATGGCGGTGCGCGCGAGCGAGGC
GCTGGCGACGAGAGCGCGGCCGCGTGGGCGCGGCGCCGGCATCAGGAAGGTGCGCGTCAC
GCCGGTGCACGCCGAGAGCGGGCGCGGCGACGTGGACGCCCAGGTCAACGCGAAGCTGAA
CGAGAGGACCCTCGGGGAGTACTCTGCGACGGCTTCGGGTGGTCCGGCGAGGACTGGCAA
GAAGTCTGCCGTGGCCGCGTTTCCGCCGGCGAAGAAGGCGCTCAAGCCGCTCAGCACCAT
CCAAGAGGATGCGGAGTGACGAAATGCTCATAAGAACATCGCCAAATGGAAGGAAATCAC
ACAAAAAAAAATGTGACAGGATTAATTTTTCTGTACATGTTTTTTCGTATTAACCATTTT
TTTTTGGAACAGTGGTGTTGGTGAGGAAAATTCAAAAAAAAAAAGTAGATAAGAATGTCG
TTTGCTTGATTTGGCACCGTACGTGTTTTTGGTAACGAAGGGAAATGAAATGTGGTCCCA
GACATGATTTGTTCATACTTGTACTTTTTCTTAATCGTGTTGGGCTAATGGTCAAAGGCG
TCGGCTTTAGATCATGTGATAATGTTCGGTTGACTATTGCGCATGTCTTCTTTTTTGTCA
CCGTTGTGATGGTCTAAGATTTTGTATGAGGGGGGTGAGAGAGGCTTTAGAAAGGGGAAA
AGGTTGAAGCATTGAGCATCTCTCGCGGCAAAAATTCTGGTGAGTACGGATTAGCCATGT
CAAAAACATCTTGTGGACTCGCAACTGACGGAGAAGGTCACTGGTCAGCCAAACGCCGGT
GCTCATCGTCGGTGCACCAGGATGTGCACATGTTGTTATAACGATGAATATGGTTTGTAC
GCAACTCATCCACAAAGTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTG
GTCCGAAAGGGCGTGGGTTCAAATCCCACTCTTGACATGCCTTTTTCGTTAATTCATATT
TTTTGCTTCACCTTTTGTTTCTTTTGAATGTATGTATATCCTTTTGTTAGACTAAATTGG
TCTGTGCCGTCTGTTGCCGACCAGATAATACGACTTCCCGCTGAGAAAATGTAGTGCTAG
GCTGAGCGGGCACGAGCATCTCACCGACAGCGTACTAAAGACATCCAAGCATACAACTGG
CGTCTCAAAAAGAAAAACGCATCCAACTGGGAAGACTGAGCTGTGAAAATGTCTCCGTGG
TCGCAAAGTCGCAGTGCCAGTGGCAACAGCTCCTGGTCTCCCACAGCATGCTACATGCCT
GATTCCTTTGGAGAAAACTGGACATGGATAACTGTAGCTTCTAGTTGCAGGTTACTCGTT
GTCCGTTTCTCCGCTGAATTTCACTTTCAGTGCCCGCTAGTCCCATTTACCACCTTTCCT
CGTGCTGGCGGGAGGGAAGGAGGGAGACTTGGTCGTAGCGCGCGCACACACACACACAGG
ATGCACGGCGGAACCCATTTGACCCGACCGGATCAGTGGGTGCGCGACGAAAGCGCGCCG
CGGTGAGTAGTGGGCACGGGACAATGCGGGCGTACGGTACGGCCTGCGTCCCCGCATGCA
CGGCGCCACGCGGACGCGAACGCTGCGCAGACCGTGGACCTAATCAAAGTCAGCGAGACC
TGCCCGCCCGGCAAGTATATGGCGGTGAATGGCGACGTACTCAGCTGGATGCGGCGGCAT
CAGGTAATAGCGTTCATGTGAGCAACAGGATCAACTACGTGCATAACAACCTACCGCTTG
TGTCGCCTCTCCTCGACAACCCGAGCTTTTGAATGAAATCTCTTCTAATCAACTTCATCT
GCACTCGGCCTATTACACCCTCCGTCTCATAATTCTTGTCTTACATTGAATGTATTTAGT
CTTCAAATTCTTGTCTTACATTGAATGTGTTTAGTCATGTTTTGGTATTTGAATACATCA
ATTTCTAAACAAACCTAAGACAAGAATATCGAGAGAGAGGAAGTAGTTCAGACTTTTTTT
TAGAAGCACCTAGAACTCAGCTAGCTAAGA