Contig Data
morexGenes
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Map Locations of contig_60679 (4010 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_60679

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71895 4 2465 bp MLOC_71895.4 Available Available LOC_Os01g37910.1, FRAME:-2, EVALUE:0.0, 13101.m03865 protein vacuolar-processing enzyme precursor, putative, expressed





CDS Structure of MLOC_71895






Contig Sequence (4010 bp)

>contig_60679 4010 assembly3_WGSMorex_rbca.fasta
GTTTCTTAACGCTTCTGCTGTGTGGAATCTTTTATTTTTAATACTGCGTTGGCAGGGTCT
TGAACTCAAGACCTCTTGGCTCTAATACCATATTGAATTCATGCTCCAGCCAGTTGCTTC
AAAAGTCCGAACTGATGGACAACGACGGGCAATATATTTCAACATCCCCCTCCCGGATCC
AAACCATCCGTCAAACTATTGCCTAAGTGGATGAGGTGGTGTCATTTCCATCAAACATTA
TTTCTGATATACCACACTTACGTCTTGTGTGCATCATGTAAGGCGCGTCACAAGGTTGGA
GTCCTTTAAGATGAGGCCTCATGCATAGACAATGGGTGCAAGGCAACCACACAATCATGG
AAACTACGCTTTGGTAACGAGAGGCGCGCAGCCACACCAACGGTCCATTCGAGTGGATGA
AGACCGCTGGATTGCAAAGAGCTCAAAATAGCTTCTTTATTTTACGGGGTGTTGTAACGA
ACATGCACTATAATATTGTTATATGACGGTGGATCTATTGCCTTTTTTGAAGAAAAAAAG
TGCCTAGTATATGAAATGTAAAAGCAAGATAACTCTTATTTTTTGAGATGGAGACATTTT
GTCTCATTTATATCAATTAAGGAAAAGAAAATTGTCCCATTAATCAATAACAAAGCAGAG
TAAACCGTTACAAACTGTAAAGCGGCATACTCATAATATCTCACACACGTCTCAATGAAG
AGGGCCTCGTCAAGATACACTCTAGCGTCATCATCGTCACTTTCCCCAAACATGCATTAT
AATCACTTTTAAACTCTGAATAAGCGATCCTAACTTTACCGCAGATGAACATTAAGGGCA
AGTCTATGGTAGCATCACTATACGGTGACCTCGGTACTTCTAGCAAGGAAATAGACGATG
AGACAGTTGCTCTTGTCCAACGCAAGCAACTCATATGGACCACCATCAACTTTTTTTCTT
AAAAGTTTTTCTTTTTGTACTCCCTCGACACGATTCCCGTCCTTTTACCAGTTTCTCATG
CTTTTGTCAGTGAAGAGGACGCGTCTTCTGCAGGAGGTCGTTCTGGCCTGCAAGCATCAG
GTTTGACTTAGCTGGATCGAGCAGGTCGACGTGGACAGCTCGGGCATCTGTCCATCGTGG
AGGGATGGTCATGTCCTAAACAAGCCACCGTAGAGACCGTGCGAAAACACAAGAAGACCC
GAGCTAGAACGAGCCACCTGCACCGGAAGGAGCGCTGCTCCGACTATGCTGGAGCTATTT
TCTTTATATAGCAATAAAAGCATATATTTACAGCAATTACATACTTGCTGTGCAGCATGT
ACTGTAGTATTTACAGCAATCACGACCGTATATATCGACCACACCATATTTTGGATGACT
GATGTGACATGGATCGATCACACAGTCTGATCAGATGATCAAGGATGAAGGACTAGCAGC
GCACGCCTGAGACGCAGCCTTGTCCATGACCTCCTCCCGGACGCCGGCGTTGCAGATGTT
GGCTAGCGACCGCATGTGCTTCATCCCGTACTGCGTCAGCGGGCCGCACCGCTCCTCGAA
CCTCCGCACCACAGACTTGAGGCAGCCCCAGTCATCCACCACAGGCTGCCCTGCCGGCCG
CACGGTGCCGAGAACCTTGGCACCTTCCTCCGAGCCGAACAGGAGGCCGCCGATCAGCTC
CACGCTGCTGTCCACGCGAGACCGCCGCGCCATCGTCTCCACCAGCCGCCTCCGTGCCTC
GACTTTCTCGGCCGACCCTTCCGCCGACCTCCGGTACTTGTGCCAGAAGTGGACGAGGTC
GGCGTCCCGCTGGTTCACTCTGGCGCCCGGCAGCTGCCTCGAGGAGGAGGAGCTCTGGAC
GAAGGTGGCGTTGTCGTTGGCAGGATTGGTGCCGATGTATTGGAAGAGGCTCTGGTCGTT
GAGGCCCAGGTCGCCGTACTGCATGACGTGGGAGCCGAGGCTGTACGTCCCGTCCGCCGA
CGTCCGGTTCCTGACCCGCTCGTACTGCTGCTTGAGGGACTCGGCGTTGAGGTTGTGCGC
GTCGCTGTCCTCCATCCAGGCGACGCTGTAGAGGTCGCCGAGGCATGTGTCGTACTCCGG
CGGAGGCGCGCCCTCGTCGTCGCCGGGGCAGTAGGTGCCCCAGCTGCTCTCCTCCGCGTT
GGCCGCCGTGGTCGCGTACACGCTGATGTTGCCCGGGAGGAGGCCCTCGAAGATGCTCCC
GGACTCGCAGGCCTCCAGGTAGAAGACCAGGCTCTTGTACCCGGCCCCGCCGGCGTGCTT
CTTCTCCAGCGTCCGCACCAGGTCGTTCGCGTACAGGTACTCCTCGTCCTCCGGCATCCC
TGGTCGACCCACCAACGTCACTCCATGTCACGATCAATCACGAAGCAAGGAAAGAAAACA
CATACACACTGAAGCAAAGATTGATGGGGATGGAATGGTATTTTACCAAGGATCCCTGGG
CCGCCGTGATCGGCGTAGTAGACGAAGATGTGGTCGTCCGGGCCGCTGCTGACGACCTTG
CCGCTGCCGCTGCCGGTGAGCTTGGACTTGTCGCCGAGCAGGGCGGCGAGGAAGTTGTTG
GTGTTCACGTCCGCCCCCGTGTAGTCCTTGGGGACTCCGGCGTAGACGTCGCCGCCTTTG
GGGTGGTTGATGATGACCCCGGGCCTGGGGTTGTCGCGGTTGTTAGCGATGTCGTCGTAC
ATGAAGACGATGATGTTCTCATCCTTCAACCCGCCCTTCTTCATGATCTGGTACGCGTGG
CACACGTCCGCCTGTACGTACGCGAATTTGTTGATTACTTAAGCAAGCAATAGGATCAGA
ACATTCTCCACGAGTATAATCAGTTAGTTAACCGATTACAAGGAATTAGTTAAGGAGGAG
TATTAGTTGGGAACTTGTTGCCTGCCTGGTGACGGTAGTTGTAGTAGCCGTTGGAGCCGG
CGATGAGGACGGCCCATCTCGTCCCGACGACGTCCTTCTCGGACGGCAGGCGGAGGAACT
CGCCGGCGACGAGCAGGGCGAGCTGCGACGACAAGACGAGGAGGAGGAGGAGGGGTGAGC
AGGGAAGGCGAGCCATACTGAACTGCTTCTCTCTGCTTCAATCAGCTGACCGGGTCGAGA
TGAAGAGGATGATCCATCCTGTCCCTCTTTATATGACACCATGAGGGTAACTCGCTTAGT
CGCTTAGAGCACGTACTAATGTGATCGGCGGATGGATGCTTAAGTAATTGATTATTATCT
ATCACTAATGTTCCGGCCCGGCCTGTGTTGGGTGGAGATGGATTTGATATACAGCAACCA
TGGAATCAGCTCGATCGGCGATACGATCGACGTGCCAGCGACCATGTCACCATGTGCTTC
GTTTTGTTTTTTGTTTTACGTGGCGTACCTGCGTACATACAAACATTATTATTGTTGCCT
GGCGTGTAATCTATCTTCATTCGTTAACAGTGCCGTAACCGCTCCCGGACGAAAACAACA
TTTGTGCATGCGTAGACGCAACAAACAGCGACACTTAATTGGTCACTTGATTGATGGTAA
CGACGGCTATGAAATGCGTTTGCGTGTGTACTGTGTTTCAAAAACTATGGCTATGAAATA
TGGCTACTGCAACTACCGTCACCTGCTCATCGCAGTATAGATATCGTGTGATTTGCACTT
GCATTTTTTTTTTGCGTGTGTATGTATACGGTTCGTGTAATACTCATCGTTCAAACAGCA
AACAACAACTTGAAGATTAATCGTCTCTCTCGACACATCAAAACAAATACTCCCTCCGTT
CCTANNNNNAAGTCTTTCTAGAGGTTTTACTAATGGACTACATATGAGTGTATATAGACA
TCCTTTAGAGTATTGATTCATTCATTTTGCTCCGTATGTAGACGTCTAATGGAATTTCTT
AAAAGACTTATATTTAGAGCATCTCCAACAGCCACGCTGTACAAGCGCCGCGTCATAAAA
AAGGCTGTATTTAACGCGCGCGATGCGGCGGCAGCTCCAGCGGGCGCGCA