morexGenes - Barley RNA-seq Database

Contig contig_60594

Source Contig contig_60594

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_60594 (2335 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_60594

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_71846	1	263 bp	AK251633.1	Available	Available	None

CDS Structure of MLOC_71846

Contig Sequence (2335 bp)

>contig_60594 2335 assembly3_WGSMorex_rbca.fasta
AGACGGGGGCGCCGGAGCCGACGCGCTGGGCGTAGCGGCCCTTCTTGAGGTAGCGCCCGA
TGCGGCCGACGGGGAACTGGAGCCCGGCCTTCACGGACCTGGTCACCGCCTTCTTCCTGT
CGCCACCCTTCCTTCCGGCCATCTTCTTGCTTGCTGCTTCTCCGGCGACGAGGTGTGGTG
TAGGCGGCGGTGGTTCTGGATCGGGATGCTCTGAGTTTGTGCGATGGAACGGCAGCGTGG
GCGCGGATTTTATTGGGAAGCGGGTGGGTGGAGCGATCCGCGTGACATGCAGCGCCCGCC
GTTGGATATTCGTGCAGTGGACGGTTGGGATTGGATTGGGGGACGCGATCCGTGGGATGA
TCTGATCGGCCAATCAGAGGACAGAGATTTCGTTTTGACACTTCATTCTCTTTTGGAATA
ATACATAATATATTTTTTTGTACTATTATATGCTGGATCGATTTACTTTTCACCTAAGAC
CATGTACGCTGCGTTTAGGGCCTTCGTTGTTCGCCTTTATAAATTTCACACATGGTGGTT
TTAGAAAATCATTCGTTCACTATTTTTTTCTGTTGAGTTTCTATCTTTATTACTTTGTTT
TTTTACTTTTTATTCTTTTTTTCGTTTGCCCTTTTTTATTTTAAAATTCACAAACGTGCT
TCACATTTGAGAATATTTCACAAATTCGTGATTTTTTATTTCATTAACGTTTTTGAAATT
TCTTTCTAAGTTCCTGAATATTCTTTGAACCGACAATATTTTTTTGTAATCGTCAACACT
TTTTTAGATACACAGACATATTTAAAAATTCATAAATATTATCCAAATCCACAACCAGTT
TTGAATTTATGTTTTCTAATTCGCTAACATTTGCTTTATCCACTAACTTTCTTCAATTTG
TGAACTTCTTCAAACCGACAAACATTTTAATATGTGAACTTTTCTGAAATTCACAAACGT
ATTTTGAATCCATGAATAGTTTTCAATCCACAAAAAGTGTCCACATGCACAAACTTTTCC
AAATTTGTAAAAAAATACGCATATTTTTAAAAAATTCACAAATCTTTTTTATTGAGGAAG
AGTTTTAGAATTCATGAAACTTTTTTTTAGTTGTCATCAACATTACATAAATTATCGGGA
TGTTGCTTTCAAAATGTTACATGTTGTTATATCATAATAAAACACCCCAAAATATTTTAA
AAAAAACTATTGCCCGTGGTATCATTGTGAGGCTTGTTCCCTCGACAATTGACGCCCACC
TTGGTGGTGGTTCACTCGGACAACGGTCCTACGACACCAGGCGGACGTACGACGACGACC
ACAAGCGAAGCCCCGACCGGCGTAGGGGCTATGTAAAGGACGACCTCCGCCCCTCCCTCG
CTCAACGCTAGATTTATCATCGCTCAAGTTATGGTCGACACAGCCCGAGTCGGCAGGGAG
CGTCCGAGTGGTCGAGGTGTCTCATGCCTCGAGTGCTTCGGGAGGCACATCCGTGAAACT
GAGAGTCCCTCCAACTATAGTTTCACAATGGGGATCGACAAGGTCAACGGTGAGTCAAAG
CTGGAGACTCGGCTCGAAGATTACCGAGTGACCGTCCACATCGGCGGGGGTGACGACTTT
GTCGTGATGAAGCACCTACCTCTCATGCTCGAGGATTTGTTATTTGTGTAGAGGTACCGC
TAATACGTCCATTTTGCATCATNNNNNNNTATCATTATTTATTGCATTATGGGCTGTTAT
TACACATTATGGTATAATACTTATACCTTTCTCTCTTATTTTACAAGATTTACATGGAGA
GGGAGATTGCCGGCAGCTGGAATTCTGATATGAAAAGGAGCAAATCTGAGAGACCTATTC
AGCACAACTTGAAAAGTCCTGAAATGTCATGGAGAATTGTTTTGGAATATATAAAAAATA
ATGGGCAAAAGAAGTACCGGAGGGACCCACGAGGAAGCCACAAGCCCAGGGGGCGCGACC
TACCCCCCTTGTCGCGCCCTGCAAGCTTGTGGCCCCCGTGGCAGGCCTCCGGCGCCCATT
TTCTCCGATATGAAGTGTTTTGACCTGGAAAAAATCATATCAGACCTTTTGGGACGCGAC
GCCGCTGTCTCGAGGCGAAACTTCGATATAAGCAATCTAAAGCTGTGACGAAGCTATTCT
GGTGGGGAAAGTTCCCTCCTCGAGGGGGGAAATCGAAGCCATCGTCNNCACCAACGATCC
TCTCATTGAGAGGAGGTCAATATCCATCAACGTCTTCATCAACACCATCTCCTCTCCAGA
CCCTAATTCATCTCTTGTATCCGATCTTCGTCTCCAAACCTCAGATTGGTACGTG