Contig Data
morexGenes
Links



Map Locations of contig_60510 (5015 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_60510

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71795 1 391 bp AK358497 Available Available None
MLOC_71796 1 687 bp MLOC_71796.1 Available Available LOC_Os07g47450.1, FRAME:-3, EVALUE:9e-49, 13107.m05050 protein flowering promoting factor-like 1, putative, expressed





CDS Structure of MLOC_71795






CDS Structure of MLOC_71796






Contig Sequence (5015 bp)

>contig_60510 5015 assembly3_WGSMorex_rbca.fasta
AGCGCGGCGGCGTCGACCTCATCTCCCTTCCCCGGGACTTCTCCAGGCTCCGCTCCACCC
ACATGTACGATGTCGTCGTCAAGAACCGCGACCACTTCAAGGTTGTCGACCTCTAGACAT
GCATATGCGCGCCTAAGCTGCCCCAAATCAACTAGGTATACATCCATACATGCATAGAAC
ATGCATACATGCTACAAGTCCGGTTCAAATAAATGTGTTTTTTTTCTTGAACGATTTGAA
GATTGCTAACCACGCCTGTCGCGTGGTATATAAACGCAGTGTGTGATGTAACGGTGTACA
CGTACCTATGGTTCGTGGAGATATATACTATATGTCTATATGATTGCAAAAAGTATGATG
TATCTAGTTTCCTTTTCTGTGGAATAAAATGAATGGAACAATAGTAAAGCCGTGTGTGTG
TTGCTTGCGAGATCGATCGTTCTTCGTCTTATGTCGAGTGGACGTAGTGCGAGGGTATCG
ATCGATCGATCTGGTTCTGTTTGTTACTGTGGCTACAAGTCACTGCACGTGACCAGCCTG
AGTGCATACGTGCATACACTTGTGTATATTAGACTTATGGTTGGCCAAGGCAGATGCCTA
GAAAGGTCTTTGGTCTCTAGACTCTAGAGGTAAACAAACAACGCCATGTCACTCCTTATC
TGCCACAGATTCTCTACGGGGGCAGAAAAAGCTCAAATTAAGCCGTACTTGCCAATTGGA
TCATGGATGCAGTGTGACGTTGCCAGTTGGAACAATATTCTCCATAGAGGTATAGGGCTG
GGTTGGCCGTAAGGAATGTGTGTGGGTGTGTTTGTGCGGTTCTGACGAGAACATTGCTCA
TCTTTTTTTTGCATAGTTGCTGCAAAAGTTTCTTTGGGATGTGGTGGTGGGTTATTCCTT
TGCAATCAGAAGTATGATGCTCCACGCTAGGAGATACGTCCAGAATGTTATAAAGGGTAC
GTTGAGAGATTAGTTCATAAAGTGTGAGTCGGAGATGTGATATTCTTGATGGTAAGTGAG
CTATGAATGCCGATGTCATGAAAAGCCTTGCGTTGCGGGTATTCTAGATCTTTCAAAGAA
TGGTAAGCAACATATAGTCTCCAACTAGCGGCATCGAGAAGGAGGGATTGGGTTAGTAGA
GGATGATGTGGTTGCTCCTCTCACATATGATCACAGTGTGGGCGATGTGGTGGTGCAGCA
TGTTGGCTTTCCAGTTCATCTGTCCCAGTGTAGCGACCAATCAAATGTCTTGTTATTCCC
TTTTGAGAAACAAACAAGAGCTATTTCTATTCATTAAGAAGTAGAATTGGCCAGTTTACA
AATAAACCCAACCATGAACGGAGCAAAGACTTATATAACACGGCAACATGACCTAGCTCA
ATTAGGTCTGCAGCACCATCAAAGTACACAAGAACATCAACACTGAGCAAAATAGCCATC
GAAACCACGACCCTAGAAAGAGAAAACAAAACCAAAGAGGAGCGGGTATGAACCTTTTGA
GCTTCGTTGAGTACAATAAGCCGCATCAACCCAAAATATTGGAACTCGCTCACTGGCCAC
GGTCAAAGACATCGACCCAATATGCAATACATGTGCCATCTCATCTGCCACTTGAGGAAC
CAAGTCTTCAAAGATGGTGCCTCCAAGGAGGGGACAACGGCGAAGACGCCACCATCACCT
ACCTCTGTACTTAATGTCTATCATCATGATTCCCAAATGGGCTATTAAGGCTATTACTTC
ACATATGTCGCATTTCTTTAGGGGAATTTGGGCAATATCCATAAACATCACCTGTCAACT
TGTGGGCCTGTGCCCCAGAAAAATGCCTTTTGAGTATTAGGGATTCCCAATTTAAGAAAA
TTCAACATGCATGTCTCTGTTAGCATCTTGGGCCAAAAGATATTTTGCTGGGGGTGATAA
AAACTGGTTGATCCTTGTGGATCATTAATATAACACTTGTAGAGTGTAGACCTAATGTTT
TATGGTTAAAAAATAAATGAATGTTGGGTCCCTTAACTAGAAAGGGGTGACTTGGGCTTT
TGTTGGTGTTAGACCATTTTATAAATCAATGCTGAGGGATACTAAGAATATTAGTTTCTG
GCATGATAATTGCTCCTTGAAAACTCAATTTTGGGATATGTATGATATTTGTGAACAACA
CAATTACTCTATTTCTCAAGTTTTGGATGGTCAACTGCTCAAACTTCCTTTTAGAATATG
CGTGGAGCGGCTGGAGCCTAGTTTTTCTGTGGAAAACGGAATGAACCTTTGGACATTCTA
TCCTCATTTATTCCCAATTCCATGGTTGATAGACCTGTTTGGAAATTAGAAGACTCTGGA
ATCTAATGCAGTCGTTTTTTTGGATTAATTTTCAATGCGTCTCTACTCCTTTTTAGGAGA
TGTTTTGGAGAATTACAGTCACTCCTAGGTTTCTAGTTTTTGGGTGGCTGGCCTTAAACA
ACAAAATCTTGAATAGAGATAATCTAGTGAAAGAAAAGCATGTTGATGACTTAACTTGTC
TCTTTTGTGGTGAACTGGAATCAGTGCATCATTTGTTCTTCCATTGTGTTATTGCAAACG
AACTTTGGAAGTGTATCACAGAAATCTTCAAGTTCGATGTGCCTCATGATATGACTGAAA
TATATACTTTTGTTGTACAAAAATAGTAAGAACTCTGGAGTTAATATGGTCTGCATTGCT
ACCTTGTGGAGCTTGTGGACAATGCATAACGATGTTTGTTTTCCGGCCTTGGCTTCGAAC
AGGGCACTCATGGGAAGAGTAAGCATGATGCTTCATCAATGGAAGATCATGTGCGCTGAT
TCCCAGTGTTGATGAGTGCTTGCTGCTTCTAGATCGAAGAAGAGGAGAGCTGCTGAGAAT
TATGTGGAGTTAATCGGCCTTGTGGACCAGGTGAATAAGCAGCGTGGAGCCTACCGGAGA
GCTGATTCCAGCTGATCGTTGGCTGATGATTTGTAATAGGTTAGACCTGCCCGTTTTTTC
TCTTTGTCCATCTGATGATACTGTTTGCTTCTATCTGTTGTCGTAGAAGTAGACCTTTGC
TTGTTCTTTTTCTGGCTCAGCTACTGTGATATGGTGTGCTTTTGCTTGCCTCATTCATAA
AATGAAGCAGGGGAACCCTTCGATATTTTTTACACTCTCCGTCCCAAAATAAGTGTCGCA
GATTTAATACTGTGTTAGTATAATTTTTATACTACCTCCGTCACAGTTTAGAAGGCACGC
ACGTGTAGTTAGATCGTCAATTTGATTTATATAAAATATATTATTTAATATAAAAATAAT
ATCATCAAAAAATAGAACATCTAAAGTTTTGAATAATATATTTTTTGTAATATATGTTTA
TCATTGGTCAAATTAACAACCTAGGTACACGCGTCGGAATTATAAAGTGAGCTGGAGGGA
GTACTAGGTCATCGACACTTATTTTAGGACAGAGGGAGTATTTATTTCGGCAGGGTCCAA
GTTTCGGAATCAGAGATTGTAAACCCCGGTACTCGCATACGTATATTTTTATTTCCAGCA
CACAGGTTACATGTTCCTACAAAGGCACACGGGTATATACTAAGTCACATATGGACAGTA
CAACACATGCATAATCGCACACGTAGGTGCTTATTCGTATATGACGTCTATACATATATT
TGTGGTGCAGAGCCACGAATTTATCCGCCCAGAATATGAAGAATATTACCGATGAAGATG
GCTAACTAGAAGTCGACAACCTTGAAGTGGTCGCGGTTCTTGACGACGACGTCGTACATG
TGGGTGGAGCGGAGCCTGGAGAAGTCCCGGGGAACGGAGATGAGGTCGACGCCGCCGCGC
TTGTGGAGCTGCACGATGGCGCGGTCCTCGTAGTAGCGCTCCCACCCCAGCGACCCGAGC
CGCCGCTCCAACGCCTCCAGCGACTGCATCCTCTCGTTCGCCGGCACGTACATCAGCGCC
TTCCGGCTCGTCGCCTCCTGCTCCAGCTCCATCACCCCGTTCTTGAACACCCACACGCCC
CCCGCCGCCATGTTTCTTCTTCCTCTTACTCTCCTTATTGCTAGCAGCTAGCTGCTCGAT
CGGTCGGTCTTTGCTAGTGTTGTACTAGTTGCTGCAGGCTGGTTATCTTCTGCTGGTGAT
GGTGTGCGGGTGATGTGTTTATATAGGCGGATGGGAGCCAACTCTGGCGATCACTGCTTG
TTCAAGATGCACTGAGAGGATGCGATGAAAAGCGACGCATAGACCGATAGAGACTTGTTT
CTTATGTTTTGGTGTAATTCCTTCATGTTTCGATATTCGACGACAGCAACATACATTCGT
CTATACATCTGCTCAGAAGTGTGTGCTTAGTATTATTCTCCCCAACTCTTCTTAGATTAC
ACGTAATTAACCGAGTAATTCCTCCATCTGGCTTTACTAGTATACTCACCAAAATCTTGA
GCTTATAATTGGCCAGAAGTTTAAATAATATTATCTGAGTAATAAGCTAACAAGAAAGTC
TATTAGTGTTAGATTCAACAGAAGATTTCCATAAAATTGTTAAACTTTGTTGTTGAGACA
ATTAAAATTTGTGTTTAATTGATCTGAAATCCTTTATCTTTGATTTGTGGAATCCTCGGG
TTTAGACATACGTTTTATGCTTGTTTGATTAATAGCAAGAAAATCGCCGAAATCATGGTA
AGAATATATAGATTGGATTTTGAGAAGAAGATAGCATTTGTTTGAGGAAATAAGAATTCA
CATAGCTGAAGCTGAAGCATATATTTTCAAAGTAACATAGGAGTTACCTTTTTCTCTGCA
ACAAGATGCTTAGTTTGTTGTTGGACTTCCTCACGACATTCTTCATTAATTAATTTATAT
GAGTCATTTATCTCACTTTTGTGGTCTCTATATATTCTCTATGCCTCGTATTATACATTA
CAGGCCGTCGTACATATACAATGTATATGTACGACGACATGTAATATACAATACGAGGTG
GGTATGCGTTTCTGCTTCTACGTTTTGTGAAGTGA