Map Locations of contig_60464 (10563 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_60464

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71779 4 2635 bp MLOC_71779.3 Available Available LOC_Os03g63590.1, FRAME:-2, EVALUE:0.0, 13103.m07052 protein metallo-beta-lactamase, putative, expressed





CDS Structure of MLOC_71779






Contig Sequence (10563 bp)

>contig_60464 10563 assembly3_WGSMorex_rbca.fasta
AAGAATGCCAGGCACACGCTTCGCGCGGAGAGAATTTCTCTGGCAGAGATGATTTTGGGT
AGCAAATGCGTTCGTCGCAACGCCCCAGACGGGCGCAATCCCCCCCCCCCCTCCCCTGGC
ATGATTTACAAGAAAGCGGGTGTCCGAACTGCTCGACGGGCCGATGAATTATCACATTGG
GTAGCAAAACGCGTCCGGACCAAGTCGGGTTAAGGGTCTGCATTGTAGATGTTCTAAATA
ATAGGGTGCACATGTTGTACCATTATGAGTTTATGTAGATCATTCCTTGGGATCGACAGT
AACCTGATCTGTTCTTCACATGACAAGTCTGCAAGTTGAGTCGTGCCTGTAGTGACAAAT
TACTCAAGAAAAGTATATTGGTGTGCATTACTGAAGAAAAGTGTATTGCTGAAATATAAA
TAAATAAATGGCATAACTATACACAGGTAGATTTGAACGGCCCTTGAGCTTAGTCGAGCT
AAGTGAGAAGTGGGAAATTCAATAATGACTAGGTAGCAGCATGCCAGCATCAGGCCCGCA
TTGCAATGTTTCCAGCGGCAATTGCAGGTTGGTCGTCACGACCGGTGTGGGTATAGCTAG
TCCTCAGCCTGACAGTGGCACCGATTCCATAGTAAAGGTTAATGACTAACTTTATCAGAG
CAAGTACAATGGTATAGTCAGATGCTGCTGCTATAAGTCATTCTTATGTCATTTATAGTC
TATCTTATAGCCAACATATACAATAGTTCATTGCAAAGGTGTATTATTTTTTTATTATAT
GGTCCATATTTCATACTCATAAAATGTTACGAGCACATGCTAGAGCTGGCTCTTAGCTAA
CAGCTTGCTTACATTCTCTCTCCTTTTCTCTTTTCTCTAACTAAACAAAAATATATTAGA
TTATTCCTTATAATCAACTCACTCAGTTCTATTGTACTTGCTCTCATAACTAAACTTAGG
TAAAATGTGGCTAGCAAAATGCTACCATAAGTTGGCGACATTTGGTAAATAAATAAATAA
AGAGTCTATGACTGACAGCGGCATTCCTTATAGCTAGTCCTCAGCCTGACAGCGGCATCG
ATTCCATAGTAAAGGCCTATTTGGTTAATGACTAACTTTATCATAACTAAATTTAGGTAA
AATGTGGCTAACAAAATGCTATCATAAGTTGACGACATTTGGTAAAAAAAAATGAGTCCA
TGACATGTGGACCATGTTACTAGAAAAGTGTGGTAAGCAACGAGTGTGAATATGAACCAA
ACACAATGTTCAGATGTTGTGGCACAACAAAGGTAGGTTAGGTGTGACAATCTTAGGCTG
TAAACCAAACATGCCGCAAGTCTCGGCCGCATCTTATAAAAAGTAGTCAATAACAGATTT
AAATCCGAGTTGATATTAGTTGCAGTTCCAAGTATTAAGTGAACAAGTCAATTCTGCTGC
TATTCTGTTATGCTTTGAATCCAGAGTTTAGCTTCTTCATCCCATTGGATCTCAAACTTG
CATTCCTGAATCCTCCCCCTTTTGCTGAGCACGAAGTGCGAGCAGTACAATCAACCACTT
AGCATCCGACGCAACTGATACTACTCCCTCCGTAAACTAATATAAAAACGTTTAGATCTA
GTGATCTAAAGGCTCTTATATTAATTTACAGAGGGAGTACATGACACTCTAGGGCAGGGC
CATAGCCGCCAGAGCCAAGGACAAGTCCAAATGACAGTCAAGTTTCAAAAAGAAAGCTGT
GATTGCCGCCGTAAGTGAGATTCACTATGCCTCCTAACTTGGGACTTAGCTTGGGAGAGA
AGAAGACACCCTTTTTATGAAACAATAAAGTTCACCCTTTACGAAATATCTAACTTAACA
TTTCACCTAACAAGACTTGACATGATGCATAGATAAAAAAACACCAACAGCAACTCAAAC
TGATGATCAACACACACGCGCGCGCAAGGAAAAGACAAACACAGCAGCTCCATCGGCTCA
GATGCACTGCAACTTCACCTCAAATTTACTACTGCAACTGACAGGATTGTTCACATAACT
TCTACAAATTGTCCACAATGTTATGTTACAACTCATGTTCCAGAGGCAGCAAAACAGGCC
TACCTGGTCATCTAGCAGAGCACAGCAGCTCGAATTTAGCGCATGTGAGAGGATTGTTCA
GATAACTTCCAGTGTCTACTACTCATCATCCAGTAAAGCACAACAGGCAGTAGAATTACA
TTTCGCTCAACAACAAAATGTCCGCATAACGCGCCTAACACAAACTCCTACTTTGCTTAA
TCGCGAGCCCTAGGGAAAGTTAAAGGCACTCTCATGGCTTCAGCTCAGGAGGCCGAGAGC
GGGATTGGTCTCACCGCACCCTGTATGCGACGAAACGCGGTCTTGATCCTTTCTTTCAGC
CCGGCGCTCGCGCACTCGACATCACCGCTCCTCCCATCCAAGTGTGCGGCGTCTCCATCC
ACAGTTATGATGAGCTTCCCTTCCTCTGCAACTTTAACGTCGCCGAAGAGCGACACCATG
AGGGCATACACGACCTTCCGCCCCACCCTCTCCGTTTCTTCTTCCGTCTTCACCGCTTCT
TCGATTGGAACAACCTTTGGACCCTCACGCCCAATGTTCAAGATCATGGCCACCACCGAG
TCGGACACCATGTCGCTTATGGGATCAGAGGACCACTGCAGTGTCACGTAGCTCTCTGAA
TCCAGGCGGATGGCCACTCTCTCGTGAACAGTGAGTGTTGGAACATCTTCTTCGGTTGAT
GATTCCACGCTCTCGTATATTTGCTTCAGCCTGTACTTGATCACCTCAAAAGAACCAGAA
TATGGGACAGCAATCCGCTGAGTTATGTTGGCAGTAGAAAGTTGTGTGTACACCCGGAGA
TCTTCAGGGGCCATGATCTGGTAAGTGAAGCCCTTCTTCACGAGCAAGCCACTGACTGAG
TCGCCCACTTCCGGTACCTTCTCGGCCAGTCTGCCAATTGTCTTGGCCATTTTCTCAGAA
CTAAAATACATCTCCACTGATTGGCAGTTCTTCGGAGACACGATTTTTGTGTTTGTCCCA
TCAAACTGAGTGATAAGTTTCTGCTTAAGCCTACCCATCTCATTTGCTTCCCCGTGTACA
AGAATAATGTTGGGTGGACAAAGCTCACCCAAGAAGCCGCTCGTCTGTGGGAAATCAGCG
TGAGCTGAGAAGGAGATGTAGAAGATCTGCATGTTAAGAGGAGCAGTGAGCCCGTTTGCT
AGTGTCACTTCTCTTGGCTCATTGATGATTGTCTTTGCAAGCGAGCCTTCGACAGCATAA
CCTGGAATAACACATGTGTTCTTCTTATCTGTGCACCACTTGTCAAAGAGCTGTCTGGAG
AGGCCACTTTGGAGGCTACCTGGACTTGCCATCACCACTGACGGACCCACATCATGGAAG
TTGTCTATGCTATTCAAAGGGTCAATATGCTTGAAATGGAAGGGATTGGACTGCGCAAAC
TGGTTTCGGATTCTTTCATTCATGGAGTTTATGTATGTCTGGTACACAGCCATGCACTTC
TTGGCAAGAGGGGAGGCATAATAGATTGGAATCTTGTGAAGCTCTGGGTGGTTAGACCAA
TACTCATCCAGGATAAGCAACAGCTCCTGTGCTCTACCAAGAGCAAACGCTGGGATAAGA
ACACGACCCCCTTGAGAAACAGTGTTGTGAATGGCATCAGTGAAGCGCTTCTCTCTGACA
TGGCGGGGTTGGTGTTGCTGCACACCATAAGTTGATTCGATGATGCAAATATCAGGGGAG
AACTGGGGTATCTCAGCAGCTTTAAGGTGTCGGTCTTCTTCACGGGAGTAGTCACCAGTG
TAAAGAATGCGAACACCAGCAATATCCACCATGAACATGGCAGCACCAAGCACATGGCCA
GCAGTATAGCACCAGAAGCGTATGCCATTAACTTCCAATGTCTGGTGGAAGTCTATGACC
TGCATGACAAATATATGTTAACACAATGTCAATTCTCACTTTGGCAAATTATAAGACTTT
CAGTCGGAATCACGCATTAGCTGTAAAGAAAAAAAATCCTGGTATCTGGAAAGCAATGCC
CAGATATTATAGGGTTCTTAATCTTAACCAACAGGCCAGTGACATTTAAGATTTTTACTA
TTCTGAACTGTAAGCATTCCAAGAGCTGCAAGCAGGAGCTCTCAAGATGGGGAAACTGAA
ACTAAGTTCACTTCAAAATATGAACCAGACATATGTAGGCAACAACTCCAGCTTCTTAAA
GAACACAGTAGTATGTTTCTTTGTTGAGATCATATCGGTCTTCTTCTTTTTTCCTCTACA
AACCTTCCAATTTAATTATTAACCACTCATTATTCATCATCATCTTACTAGCAAGGTAGG
CGTGTGCTTAGGCAAGACAGGGGCTAGGCAGAGTTAAACACTAGGAATTTACGCCTAATG
CTTTTTGGAACCTTCTCCAGAACTGTACCAACACATAAGCATTCCAAAGGCGGCAAGCAG
GAGCTAGCGAGATGGGGTAACTGAAACCAATTTCACTTCAAAATATCAACAAGAGATATA
TAGGCAACAACTCTGGCTTCTGAAAGAACACACTAGTATGTATCTTTGTTGAGATCATAT
TGGTATTCTTCTTCTTTCCTCTATATATAAACCTTCCAATTTATTTATCATCTTACTAGC
AAGGTAGGCGTGTGCTTAGGCAAGATAGGCGCTAGGCAAAGACAAAAACTAGGAATTTAC
GCCTAACGCTTTTTGGAACCTCGTTTAGAACTGTACCAACACATAAGCATTCCAAAGGCG
GAAGCAGGAGCTAGCGAGCTGGGTGAAACTGAAACCAATTTCACTTCAAAATAGCAACCA
GAGATATATATATATAGGCAGCAACTCCGGCTTCTAAAAGAAAACAGTAGTATGTATCTT
TGTTGAGATCATATTGGTATTCTTCTTTTTTCCTCTATATAAACCTTCCAATTTATTTAC
CGACCACTCATTATTCATCATCATCTTACTAGCAAGGTTGGCGTGTGCTTAGGCAAGATA
GGCGCTAGGCAAAGGCAAAAACTAGGAATTTAGGCCTAACGCTTTTTGGAACCTTGTTCA
GAAGTCAGAAGTGTACCAACACATAAGCATCCCAAAGGCGGCAAGCTGAAGCTAGCAAGA
TTGGGGGAACTGAAACCAAGTTCCCTCAAAATATCAACCAGACATATACAGGCAACAACT
CCAGCTTCTTAAAGAACTCGGTAGTATCTTTCTTTGTTGGCATCATATCGATCATCTTCC
TTTTTTCCTGTACAAACATTCCAATTTATATATCGACCACTCATTAACTATCATCATCTT
ACTAGCAACGTAGGTGTGTGCTTAGGCAGAGGCAAAACTAGGAATTTACGCCAAACGCCT
TTCGTTTCTGGAATCTTGTTCACAATTGTACGAACACATAAGCATTCCAAAGACAGCAAG
CAGGACATTGTGAGATGGAGGGAATTGAATCCAAGTTCAGTTTAAATATCAATCAGGCAT
ATAGGCAACAACTCCAGATTCTTAAATGATACAGTACTGTCGTTCTCTGTTTCTGATTGG
ATCACTCTTCTTCCTTGTTTTTTTCCCTAAATAATGTACTACCAATTTCTCTACGGGCCA
GTAAATGTTTATCATCATCTAATTAGCAACAAATACATCGTATCAAACAACATGGATTAA
GCGATTCGCATTCATTCGATTCACATCTGCTAGAAGCAAAGAGATGAGCAAAAAGAAGAT
ACCTCGATTTTGTCCATTGAACGGATGATGTCCTGCTCGTCAAACAGCATGTCCTCGACG
GAAACCTTGCTCACTTTGACGTAATCCGACAGCAGCAACCTGTAAATAGCCTTGGTGGCG
TGGGTCATGAACACGCGGCCCTTAAACGTTGTCTGCAAAACAGGGCAGAGCAGAGCAGAC
CAAATTCAGAGACCGAACAGCATAACATCAACCTGCAATTAGCGAAAAGCCTAACATTTG
CTTACCTTCTCCAGGAAGTAGGGCAGCGAGGCGGCGTGGTCCAGGTGGAAGCTGCAGCAG
AAAGTCAAGTCAGAATGTTAATGAGGATGAACTCCGGGAGAAGGTGGCGGGGTGAAGCTA
GAGAGGGCGAGCAGATGGTTAGATAGTTACTGGGTGACGAGGAGGACGTCGATGGCGGAG
GGGTCGATCTCGTCGAAATAGGGCAGCGCCGCCATGCCGGAGTAGGCCGGGTGGATGCCG
CAGTCGAACTGGAGCAACAACGAGCAGTCAGATCCCCCGAAGAGAGCAGGCGCGGGCTAA
TCGGAGAAGGGGAGGAAGGTTAGGGTTTGGGGAAGGGGAGGAGGGGGGTGCTTACGAGGA
CGGTGCGGCCCTTGAAGGTCATGTGGACGCAGGAGCGGCCGACCTCGCTGCCGGCGCCGA
GCGGCGTGACCACCATCTGGTCGCCCTCCCGGCCGCCCGTCGCCGGCCGCTTCCCCGCCG
GCGGCGCCGTCGCGGCGGATGCCATTGTTAGAGAAAGAGAGCGTCGAACTGGATGGACCG
AGGGGAGGGGAGGAGCGGGTTAGGGTTTCTTTTGGTGGCACCGTCGCGGCCCAACACCGA
GTCGGCCTGGGTGGGTGGGCCTGCAAGGTTCATTTCGGATTGGCCAAATAGATCTGGCTT
CTCTGCAGGCGGACCCAACAATATATTTTATCTTGTTCTTAGAAAAAACAATCTCTTTCG
GTGCTTCAACTTCAATCTATATTGACAGTGTTTGGCATCGACGATCGTATCGTGTTAAGG
GTGATATCACTCGCCTCCTTCGATAGGGAAACCGCAGGCGTGACACTAAACAATCTAATT
TCTTTTTTCATGTGGAGCATGTAGCGAAGAGTATCCAGCCTACACAAGGTTATTTATCAC
CTGGCATGCCCAAATACAAAAAATGTCCCAAATAACATGGTGCATGATTCTATATATACC
TACGCGAGACAGAGATACGTCGTTAATCTCGATGATGTAGGCTATTGATTAGCATACATG
GTTCACATTCTTAATACTAGCCTATCGCTTTGAATCAAACACAAGAACAACTGCCGGAAT
ATCACAACATTACACATGATTCAAAGTTTCAGACTAATCATATTGCAAAGGACGGCGGCA
TCAGCCCGCGACAGATGGCAGAAGCAATACCACAGCAGCACGTCTTCGTGTCGTGTCATC
GCGAAGCTGGCACCGGTTGCTCAGCCCCGTGGTAGACCATAAACCACTGCCTCGTGTTTT
GTGTCTTTCTCATGTTTTTTTTCTTTTGTTTATACTTCCAAATATTAAGTAAATATATTA
CAAGAAAACAAGTGGCATAACTTTTTTTAGAAAAATGTTAAACAAGCAATTTAGGAATGC
TAAATGTACATAGAGAAAGTGTTTCTCATGTAAATGAAAAATGTATACAGAAAATATATA
ATCTGTGTAAAACAGTTTATCATATATTTAAACATGTTAATTAAACCTTCTACCAAAATA
AAATTGTAATTTCAAAAATCATCAAGCATTTAAAAAATGTGAAATGTGTATAGCAAAAAT
GTTGGCCATATATATTCAAAAAATGTTAAACTTGGATTTGAAAAATGTTAATCAAGCATT
TAAAAAATATTAAATGGGTACAGAAAAAACTGTTGACCACGTATTCAAAAAATATTAAAC
TTGTATCTGGAAATTGCTAACCAAGTATTTGGAAAAATGTTAATGTGTATTAAAAAATGT
TAACCATGTATTAAAAAATGTAAATATATTATTCGAAAACTGTTAATCAAGAATTTGGAA
AAATGTCAAATGCGTATAGAAAAATAGTTGACCATGTATTATAAAACTTTGAAAATTTAA
TCTCAAAACTGTTAATCAAGGATATTTACAAATTCTATAACGTGTATAGAAAATTGTTGA
TTATGTATTCAAAAAATATTAATTGCTTTTTTGTAAAATGTTAACCAAGCATTTGAAAAA
TATGAAATGTCTATGGAAAAATGTTTACCATATATTAAATAAATATTAATCTTCAAATTT
AAAAATATTAAATGTGTATTAGTAAGATGTATTATATAAATGCCAAAATATGTATAAAAC
ACTCAATACCCATGAGAAAACAAAAAAAGAAAAATCAATGAAAACGATGGAAAACAAACA
AAACCAAAAAAAAACAAAGAAATAAGAAAGAAAATAAAAGGCTAGTGGAAACAAAAAAAT
CAACCAAAGAAAAAAAGAAAATAAAAAACACTCACAACATAGAAATAAATGACAAAAAGT
CAGTGAGGAAACCATAAGAACCAAAAACAAAAAAAACACGGAAAACCAGTGAAAACCCGT
CTCTTTTTCTTTAACAAGGTCACGACCTTCTAATTTAACACGAACTAGCATGGCCTAGTG
GCTAGCAGTGCTACGCTACAACCAGGAGATCCTCGAATTGATTCTCGCACACCCCTTTTA
CTCTAGTGTATTTTCGTTAAGTATTCGCCGAGCTCCGCACATGCTCCTCTTCGAGGGTTC
GCCACATCTTCCTTTTTTATATCATTTATAGTTATCAACATGATGTTAATGACGCGCTTG
AAAACTAAGAAATGACACAAAATTATTCTAGAAATGACCTTCAGAATATTTGTGCTAGGA
GAGATTTTCACTCGCACCATACACTTGCTAATGGGGAGGGAAATCTGATGGGTTGTTGTT
AGGTGTCAAATACACTACTATAGATGTGATATCCCAAGAAGATAGAGATTACTTTATCAA
ATGACTGTATAAGATATGAAAACTAAATTCATTTTGGATTTAGTTGTGATGTATGAAGTT
GCAATTTCACTAGGGGGCTTCAATAGGCTGAAGCATATCCTCCAAAATTCCTATTTCAGC
TACATATACTACTTTACGACTATACCGAGATGCTTAACATGTAAATTGAATGCATTTGCT
AAATAGGCTTACTTGATGTTTTGAGCCTACCATTCAGTTCCATGCTAGATTCGCCACTGG
ATGTATGGTGATGTTGAACCTGAAAGAAAAGCAAATTTTATTGTTGAACTTTCTAGAGTT
CTTCATGATATAATTGGCGGGGATTTTAATATAGTTTGAAAATCCTGAGAGAAAAATGAA
CCTCACTGTCCTAGACATTAGAGCTCCCTTTTAAATTCAATATGAAAGCAAGCTGGGTTG
GGAGAGTTGGAGATGCAAGGAATAAATTTCGATTGGGCGAATAATTTACCAAATCCATGT
GTTTGAAAATCTTGATAGAATTCTATGTTGTATTGATTGGGAATAAAGCTATCCACTCAC
CAAAGTTATTGCATTAGTTAGGGATAAATCTTATCATACTCTTTTGTTTATCGATATTTG
AGATGCGCCCAAATCACACCCCCTTGTAGATTTAGAAATTCATTTTTTTAAATGGTCTAG
AATAAATAGTTATATCTACTTGGAGTGATCCCAATATTGATGGAACAAATATAGAAAATG
ACAAACGTAATTTAGAATTTTGAGTTCTAAACTGAATGTTTGAATAGAAACATGAATATT
TGGTATAGAGAGCTCAAAAAAGACATTCCGGGTGAATTGGACACTATTAACAATAATGTG
AATTATTTAGTATGACAGCAGAGGGTCCACTACATCTCCATTTTTAACATCATTTATAGT
TATCAACATGATGTTAATGATGCGCTTGAAAACTAAGAAATGAGACAATGTTATTCTACA
AATAACCTTGAGAATATTTGTGCTGGGAGGGATTTTCACTCGCACCATACACCTACTAGT
GGGATGGGAAATCTGATGGGTTGTTGTTAGGTGTCAAATACACTACTATGGATGTGATAT
CCCAAGAATACGGAGATTACTTTATCAAATGACTTTATAAGATATGAAAACTAAATTTAT
TTCGGATTTAGTTCTCATGTATGGTGATGTTGAACCTGAAAGAAAAGAAAATTTTACTTT
TGAACTTTCTAGAGTTCTTCATGATATAACTGGTGGAGATTTTAATATAATTAGAAAAAA
CTCAGAGAAAAATGAACGTGACAGTCCTAGACATTGGAGCTCCCTTTTAAATGCAATTTT
GGAACAAGTTGGGTTGGGAGAGTTGGAGCTGCAGGGAATAAATTTCAATTGGGGGAATAA
TTTACCAAATCCCAGTTTTAAAAAACTTGATAGAATTTTATGTTGTATTGATTGGGAAGA
AAGCTATTCACTAACCAAAGTTATTGCATTAGTCAGGGATAAATCTGCCATACTCCTTTG
TTTATCGATACTTGAGATGTGCCCAATCTGACGCCCTTTTTAGATTTACAAATTCATTTT
TTGAGAGATGGTCTAGAATAAATAGTTAGAACAACTTAGAGTGATCCCAATATTACTGGA
ACTAATATAGAAAATGGCAAAAGAAAATTAGAATTTCGAGTTCTAAATTGAATGTTTGAA
TACAAACATGAATGTTTGGTATAGAGAGCTCAATAAAGACATTCCGACTGAATTGGAGAC
TATTGATAAAAATGTGAATTATTAGGTATGAGAGCATAGGGTTGCTACTTCTCAAACAAC
AGC