Contig Data
morexGenes
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Map Locations of contig_6045 (3605 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_6045

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71771 1 776 bp MLOC_71771.1 Available Available None
MLOC_71770 4 1908 bp AK359600 Available Available None





CDS Structure of MLOC_71771






CDS Structure of MLOC_71770






Contig Sequence (3605 bp)

>contig_6045 3605 assembly3_WGSMorex_rbca.fasta
GCCCGTCCCCTACTCCTGCGCCGTCTGCGGCCGCCGCTTCCCCACCCGCCCCGACCTCGC
CCGCCACTTCCGCCAGCTCCACGAGCGCGAGCGCAACAAGAAGCTCGGCCGCCTCCGCTC
CCTCAAGGGCAAGAAGCGCCAGAAGTTCCGCGAGCGCTACATCTCCGGCAACACCAAGTA
CCAGGACGCCGCGCGAGAGCTCCTCACCCCCAAGGTCGGCTACGGGCTCGATTCCGAGCT
CCGGCGAGCCGGCGTCCATGTCCGCACCGTCCCGGACAAGCCGCAGGCTGCCGACCAGGC
GCTGAAACGTCAGGTGAAGCACGCCATTGCCTGCGGCGTCGACTGGGTCGTGCTCGTCTC
CGATGACTCCGACTTCACTGACACGGTGCGCAATGCACGCGCTGCCGCCCTGAGGATGGT
CGTGGTTGGGGACGGGTGCCGCGCGCTCGGGAAGGTTGCTGATATTTGGCTGCCTTGGGA
CAGCGTGCAAAATGGGGAGGTTGATGAGGAGATGATGCGGAGTGGGAAGGTTCCACAGTT
TAGATATGAAGAGCACGATGAGCAAGATGATGATGATGAGTTCATAGTGGATTGGGATAC
GAATGAACTGGATGATGTTGTTGATGACATTGTTACAAGCAGGACCAAGGTGTTTGGTGC
TACAACAATGTCTGCATTTGCTGAAGAGGACATTGTTGATGGTGTATTGGGGCTTCGACA
GAAGGAGGATGACATGCTTTGGAGTAGAGACGACGAGGATGAGGATGGTTATTTGTGAGA
TTTGCACAGATTGGCAGGTAACAATTGGATATGTGTGCATGTTTCTTTTGCTTTTGATGC
ATATACAATGACCAGTCGGTCCTCTAGAAAACTAATGTAGGGTTAGTAACAAGATACTGA
GCGGTGTGTGCATTTTGCTGATCTATGCATGTGTGTGCCTTGATCTTTGCAGATATATTT
GATAATTGAGTTGAGCAAATATATCTTGTTTTGTTTTTTAGACTTTGAGACCCGAACTGT
CTGTGTTGTCAGTAGAGTATTCTTATTAACATACATTGGTTATACAGGTTCATGACAATA
TTCTTCTCATTGTTAGGACCAACATATATGACCAAGTAGTCGAGTCATCATCATCGGTTC
AGCACTGATCAATTTCGCCAACTTGGTGACACCGCAATTATCAGACTTGCTAGGCGGCAG
GTTTTGTGAGGCGTTAGGAGGGAAGTCTCCAGACTGTAATGGTCAACTGATCAACGAGCC
AATACCACTGGCTTGCGTTCTTGAATTCTTGTCATTTCTACAAGCACAGTCTGACTCCTG
AACTAACTTTAGGACTGGAAGCTTGATTGCTTTCCTCAGTGCCACTGCCACTCTGCACAC
AAGTAGCCAGTAATTTCAGTATCTCTTGTTTCTGCACTTCAGAGCCACTTCTGCTTTTTC
TGTTTGGTCTTGGATAATCATCCGTCCACCTTAATAAAGATGACATCATCATCCAATCAT
TCGTCCACTCTGACAATTAAACTGTACCTTTCACTTAACCCCTCACTACCCTTCTGACAT
GAGCATCATACCTTCAGCTGTCCTTTTTGTCAGTTCCATATAGTCACCTCCATAAGCAAC
ATAGCCTGTTCACCACATTTTATAGAAACCCCTCCTCTATAATCATCAGCGTTGCTCAGC
CTTTTGCTAGTTTTCTGCAGTTGGTATCCTTGATTTCTTTAATTATTTTCCCAAATCTCT
GCAGCATGAGCAGCATCTTCAGTTATTAATACCAACCGAAATTGGGGGCACCGAACTCCT
ATTAAATTTCCTGCATAAAATTAATTTCCCACAAGGCTACCTCATGAGAAAATGTAGCGG
GATGGCACTATAAGTCAACAAGGGATGGTAACTCGTATTACAATTAGTGGTGGCTTCAAG
ATTTTTGTAGGCTTCACAAGTCATTCAGTCTTATAGCTCTTCATTATCTGCATGCAGTCC
TTTTCTCCTCAGGTGCTCTTTTGCTGGGCCTTCAGTTTATTGTTTTATTTAGCAGCCGTT
ATTATTGGCAAGCACCCATGGAATCTATGTTTGGGCTCATAACAGATTAAAAGTTGCTCC
AGCTACTCAGCTAGAGCCTTGAGCACTATACAAGGATGTGTTGTAGAAGTAATCCATTAC
CTTCTGGGTGGAATTGCCACAACATGGGCATCCTTGCTGATTTTTTGGAACACATGCTTA
TTATCGTTTGGGGAAGTGTTGTACTGGAAAACAGGTTGGCAATATGTGTTCTATTTGTGT
GTTGGGGAAAATGGCTAACTTGAGGTGCAAATTTTGCAGCATACTGAACTTGGGAGCCCA
TGGATTGTTCAGGGATCTTTGGTTCAAGAAGTATCAAATTCAATTTGAGAAACAGTAGGT
TCCCCAAATCATTTATTTTCATGAAGTTTCAACTGCTATTTGAGAGATGGGAAACAGTAA
GGCAGTGCCAAAACACCTATTTTAGAACTGTAACTCTGTCAAACCCGGAAACATGGTTAA
TAGAATTGTACTACCTCCGTAAACTAATATAAGAGCGTTTTGATCACTAATATAAGAGCG
TTTGGATCACTTCTTTAGTGAAATCCAAACGCTCTTATATTAGTTTACAGAGGAGTACTA
TCATATCTGCTCAAGTCTTGTCCTATTTGCGTGGTGATTGTTTGGCTTGGATTGAATGTA
AGTTTATAACCAAATGGCCCTCATGTACAGATGCGTTTAACCAGTCTTTGTCTCCCTACC
AAACTCTTCTTGGTAATATAAGTACTCCAGCAACGAACCAGACACGGTGACATTCTGTCA
TGTGTGTCTTGTGGTGGTACTGATTTTTGTTCAGCAAAAATGTTCTACTAGGCCATAAGA
TCCCGTTAAAATCTTTCAGTCACTCGCTTATTTTGTTTTTCAGGATCATTGTTTCTCAAA
GACCACCGAATTCAAATCTGAGGCATAACATCCATCGCCTGTGCATAACAAACACCCTGC
TAGAGCAGTAGCTGGAACCGAAAGAAAGAACCGCATAACTGGATAGCCTTAACCAGGACA
CAAGTGCACCCTCGATGCAGTCTGGAGGAACAGAAAACAGCGTATATACGGATGGTGGGC
AGGCGCTCCGTTGCAACACACACACACACACACACACACTTGAAGAGTGTCTGAAGGCTT
GCAATGGGTAATGGCATGTCCTGCAAAGGGTGGGTGGCAATTTGGCATAGTGTGATGAGA
GCATTGCTAAAAATGTAGATGCACTGTCATGAATGTGTGCGTTGAAGATTAGCCTGGAAT
TGTTAATGCAGTGAGTCAATGAATGTGTGCTGTTTACAGACATGATCTATGTTCTACAGA
TGGACTTTTGCTCTCTCTGTTCTTTCTGTATTATACTGTTATATATGTGCTGTGAGTTTC
TGAGGAAAGATGTATTTGCAGTTTCTTTTTCCAGGGGGTACATGCAGTTTGCTTGACTGA
AATGGCTGGTGCCCAATGGCTGTGCTCATAAGAACTGACCGGATTTAGGCAGCCTGAAAC
AGTACGACTAAGAAAAAGGAAAATCATCAATCTTTTAGGGGGTTGATTGATAGGGTCTTT
GGGGG