| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_60418
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_71748 |
1 |
4332 bp |
MLOC_71748.1 |
Available |
Available |
LOC_Os08g13980.1, FRAME:+1, EVALUE:7e-107, 13108.m01499 protein glycosyl hydrolases family 16, putative, expressed |
| MLOC_71749 |
3 |
3033 bp |
MLOC_71749.1 |
Available |
Available |
LOC_Os04g51520.1, FRAME:-3, EVALUE:4e-111, 13104.m05258 protein glycosyl hydrolases family 16, putative, expressed |
CDS Structure of MLOC_71748
CDS Structure of MLOC_71749
Contig Sequence (6310 bp)
>contig_60418 6310 assembly3_WGSMorex_rbca.fasta
TTACCTTCTCTCTCCTCTTTTTTTTTCTCTAACTAAATAAAAATATATTAGTTTATTCCT
TATAGGCAGCTGACTCAGCTCTATTGTACTTGCTCTAAACGGGTTTCTCTAAGTCGTGAC
TGCACGCTCCCCGATGCGGGGCAATGCCCAATTGGAAATTAACTTGGTGTGGGCCGTGTG
GCGTGCCAGCCGTCCAAATCTGTCTCTCGATGACAGCTCCTCCATACACCATGGAAAGTC
AAACAGTTCCAGATCGTATGCCGCTCGCGGCCTGAGGCTTCCGAGACTAAACAATGAGCA
GTACACTTAATTCGTTTGACACGTAGCGAATCTGAGTCGAGGTGCATTAGTGTGGATGCA
TGATTGAGGTCAGGTCAGCGCGCCTCTGCTGAAAGATATGAGCTCACTTAGATCTAGCCA
GCCTCGCTAACCTACGGCGCGCATTACAAATCTTGCACACGAGACCCCATCGTGCATTGC
ATGTGCACGGCGTCCGCCGGGAGAGACGGCCGGACAGTGTTCCCAAAACGCTTATATATC
GCTTAGCAACCCAGCAAGCTTGTCTTCCCAAACCAGCAGCAGGTTCTCCCTCCCTGCGGC
AACGCTGGCATTCGCTCTCCTCAGCAAATTCCTCCATCTGTCGCCCATTTCCTCACCACC
TTCGTCTCCAATATATATACAGGAGCGAGCCGCTGACCTCTCCCTCTCTCTCGGCGTTGA
AAGCAGTACGACAGAGGCTAGCTAGCTAGTGTACTGTCCCGGCACTGCACATAGCAGCAG
CAGGGACAGGCGGAGAGCTAGCTAGCCAGCCAGCCATGGCGCCGGCATTGCCTTGTAGCA
GGCCAAAGCTGCTGCTCCTGTGCGTGGCCCTGGCCTTCCTCCTGGCCGTGGACGTGGGCA
GGGCGGACATCTACAAGGACATCCAGATCATATGGAGCGCGGACCACACCTACTACTTCA
TGGACGGCGACAGCGAGGCGCTGGCGCTCTCGCTCGACTTCAACCGCGGCTCCGCCTTCA
AGTCCAACGACATGTACCTCTACGCCCGCATCGACATCGACATCAAGCTCGTCGAGGGCA
ACTCCGCCGGCACCGTCTGCACCGTCTACGTAAGATCTCGATCTAGTAATCAGTTTGCAT
CAGTGCAGCTTAGCTTGCCAGTGTCACAGTGTGTGTGTGTGCGTCCGTCGAGTTGACTTT
TGACATGGGCGGTGTACGCATACAGACCATCTCGGAGGGGCCGTGGGACATCCACGACGA
GATCGACCTGGAGTTCCTGGGCAACTCCACCGGCGAGCCCTACACCCTCCACACCAACAT
ATTCGCCTACGGCGTCGGCGGCCGGGAGCAGCAGTTCAAGCTCTGGTTCGACCCAAGCGC
CGAGTACCACACCTACTCCATCGTCTGGAACCCCAGGCGCATCACGTAATGAACCTATTT
TCTTGCGTGATACTCCGTATATGTTATATGTACGTACGTGGAGCATGTAGGTCGAGGTCG
ATCGTGCCGATCTTCAGAGAGCACATAGACTGACTGACGTGAACTGGACTTTTAATTGCA
GGATCGAGGTGGACGGCGTGACGATCCGTTCCTACGACAACAACGAGGAGCACGGCGTGC
CGTTCCCGGCGTGGCAGCAGCAGCGGGTGTACGGGAGCCTGTGGAACGCCGACGACTGGG
CGACGCAGGGCGGGCGCGTCAAGACGGACTGGAAGCTGGCGCCCTTCGTCTCCTACTACC
GCAACTACAACATCACCTACTGCCGGCCGTCGCCGGGTGTGTCGTGGTGCGGCGCCGAGC
CCGCCGGCTCCCCGGTCTTCAACCTCGCCCCCAAGGCGCGCGCCGACATGCAGTGGGTGC
GCGACATGGGCTACGTCATCTACGACTACTGCACCGACAGGAGCAACCGGTATAACGACA
CCACCCGGCCCAAGGAGTGCTCGCTCCCGCCACGGCCATGAAGATCCTTTCGTTTTTTTG
GCTGAGCTAGCCAGGGGGTTGAGGTTGAGCGATCGATCGATTCATTGTTTGGGTTCGATA
CACACAGTATCGTCCACTGATTGTTTTTGTACATCTGAAGAAACAGGTACGTGCGGTGCA
GCGGGCTTGATTCTTTCATTGGATTTCTGATTCCGGCCTCCCCTTTTTCCTCCACCTGTA
TCAACATTTATATGACTGAAAGACACAGAGCAATTTTTTTTGGCCAATTTGCTCTTCGTC
CAGGCTCAAGATGTTCACAAATGAGTTAATCTTACCCACTGTATGGTTGTATTATCTGAG
CATATATATATGGAAGGTTTCTGCAGGAATCATCCTTGGTATGATCCGTACACCTATATA
CTACCATTGCTACGCCTACACGTCACATCTGAGTACGTGAGACGACCTAGCAGGCTAGGC
TAGGCTAGAACTAGAAGCACGAACACAAACACCCCACGTCTGTCTGTCTGCCTAATACAC
GACGACACGTGTGTGGAAGCGGTATGGCCGACGGAACAAAACAATCAGACGGCCGAGGCG
AGCCGGTCCATGTCGCACTCGGCGGGGCGGCCCAGGTTCCAGGGGTCGTCGCAGTAGTCC
ATCACCATGTACTTGTCCCGCGCCCACGCCACCGCGCGCTCGCCGTCGGGCCCCAGCCGC
CGGGCCATCCACGACGCGGCGTCGCCCGGGCAGCAGAAGGCCGACGGGACGTCCTCATCG
CCGTCGCCGTCGCCGGCCGCCGAGACGCAGGCGCTGGAGGCGTAGGTCCCGTAGGAGGCG
ACGAAGGGCGCGTGCGCCCAGTCGATCTTGACCCGGCCGCCGCGCGTGGCCCAGGTGTCG
CCGTCCCAGATGGTGGCGTGCACCTTCATCGCCCGCCTGGTCAGGTACGGCACGCCGTTC
GCCTCCTGGTTCCGGAACACGCGCACCGGCACGCCGTCCACCGAGAAGCTGGCAACACAG
CATCAATCAAAGTAAAAATTGTTAGTACTCTAAGCAGGGGATCTCATGCATGCATTTAAT
TCGATCGATCGATCACTCGGCGCAGTGCTGCAGACCTGCAGCGATGAGAAGATGCCTGGA
TGCATATGCATGGACGGGCCAACTGGCTTTGGGTAGTATTGAATTTGCCGAGATTTGATT
CAGATGTCGAGGAAGCAATTTTTGTTTTGTTTTCGCAGGATCTGCTAGTAGCATTTGACT
CCGCGTACTGGCCGGTAGTATTATTGCACCGTTAGCTGCTTTGTTTAGGGGCTAAGTTGA
CGTGCATGTTACCTACGCAGGCATCATCTCATGTGCCTCTTCACGTTTTCCTCGGCCCCT
ACTTCGTTTAAAAGGGCAATCGGCTGGGACAGGTGGTGTTCTCGTGCTTCCAAATATGCC
GACGCGGCTAAATTAAGCTGCCGTCCCCCCAGATGGCTAGAGTAGCAAGTTGATGTTCAA
GTCTTTCTGGTACTCCAAACCGACAGTGGAGGGTTCATATAAAATGGTTGTTTAATTTGG
ACAGATTTTTTGAATCTTACGTACTAGCTTTCTTATCTTCTGACCAAAACGAAATTTACT
TGGAAGGTTTCCATTTTTTCTATACTTTTATTTAAGAGAAATCGTCGCTTTATCTGTTTG
AGAGAAGGTGGTTTGTTGTTCCAAAAAAAAAACAATTGTGAGAGGTCAGAAAAAACATCG
CTTGCTTGCTTTAGAGACGTGCGCAAAGGGGAAAAGAATGCGGGTTTTTTTTTCAAAAAA
AACTGGAAAAAACCTTGTTTTTTTAGGGGTTGAAAAAAATCTTGTTAGTTAACGGGCCTA
GTACAAACATGGGAAGAAAGGCCAACTATGAGGAGGAAAAGCATGGTGAGTGTAAGCCCA
TGCGTATAATGATACTTTGGGCCGCCAAGTTTAGTTAAACCGTCATATTTTTCATGCGTG
AACATGCGTTCAAAGAGTCGTCCAAACACAATTTTGTCTTCTCGTGTGTGGTCTTCATGT
GCTTATCGCCGGCTCACGCCTGCTTAATTTTCAGCGACTGCCTTGTCTGGCACAACCGAA
CGTTAGAAACAACACATATTTCACCCGCAAAAAAAAAAGAAAAAAAAAAGAGAAACAACA
CATATTTTTAAGATCCGAATGATGATTTAATATGAATGAATGATTAGATGCCTTGCATGG
GGGACACGTTGATATCAACACGTACATGATGTTTAGAGGGTTCCAGAGGATGGTGTAGTT
GTGGAAGTCCTCTGTCGGGTCGAACCACAGGTAGGATCGCTGCTCCCTGCCCCCGACCCC
CTGCGCGAACACGTTGGTCTGCATCAGGTACGGCTCCCCGCTCACGTTGCCCAGGAACTC
GAAGTCGATCTCGTCGTGCCCGTCCCCGACCGCCGTCGGGTCCTTGGATGTCAACTGCAT
CATCAACACCATGCATGCACAATCAAAACACGCACCCCAAAATACATACGTGCGTACGTC
AAACTCGAAGGAAGTATTCGTGCATGCACACGCATGATCGATATAGATGTCAGGGCGGGG
AGAAGTATGCATGAAAAGTATTGGCGGACTTACGTAGAAGGTGGTGACCGTGCCGGCGGA
GTCGCCCGGCACGAGCTTCATCTCCATGGTGAACTCGCCGAAGAGGAAGGCGTCCCGGGA
CTGGAACCCGGAGCCGGAGACGTTGTTGAGGGTGAGCGTCACCAGCCGCCCGCCGTCGAC
GATCTCCACCCGCCGGTCAGGGTCCGGGTCCGTGCCCCACTTCACCTCGAAGTTCTCGTA
GAAGCCACCAGCGCTCGCGCCGGCGCCGACCGGACACGCCGCGAAACAGCAGGCCACGAC
GACGATCGCCGCCGCGGCCATTACAACAAGTAGAGGCCTCGACATGTTTTCTACACGTTC
GAGTGCTATGTTATAGCACGATCGAGTTGGAACTGTACGAGCATTGTGTGCCCGCTTTAT
AGTGTTCAGGCCGTCGAGTTGGGCACGCCACCCGTGCATGTCGACTGACGAGTCACGCAT
GGTAACGTAGCATACGTGCACAGCTCTGCTTGGGTTGGCGCATCACAACGCGCAACTGGC
CGGCCCGAGCTCGACCTTGTCAAGCCCCGTGGAGCTCCTTTTTCCATTTGAGCCCATCTA
GTCGTTCCGTGGCCGTCTGTAGAACTTACGTGCATGCGATGTAATCATTGTGTTAGGTTT
AACCAGCGGATGCTTAATTAGCGCAGGGGTCGCTGTCATGCCTTACATTTGTAAGGATAG
GGCAGGAAGACTTTGAGAAGTTTCCGGCATCACGCCTAATGGCTAGCTACGTAGGCAGTA
CTTTTTAATTGTGACTTTGGGACGGTACGTACATTTTATTACTCCATCTCTTGGTAAGTA
AATATATGTGTCACTTTGGAACATGAACGCAGTCTTGAACGTCTAACTTTGACAGCTTGT
ACTTTGTAGAATACGAATATGTTAGTGACAAACCGTGAGATGATCATGAGAAATATCTCG
TGAGATATGTGCTGACACTAGTTTTCCTGCTAATATATTAGCTAATGATTTTATATTACC
CGGCCCGTACAAACTAGAGATTTGTGGATGCACATATTCTAGAGAAAATCTTCAACTATT
TGGCCAAATACAATTTTCGACGAGGTTCTTCAAACTAACGGCTACTTTTCACCTGTGCAA
GTTCACACCGTGTCTCTCATAGTAATGCCTAGGTCTGACTTGCTTCGATCCAGTTAGATC
TTGCAGTTGTACTTTTGTGGCGCTCTATGTGACTGACACATCAACTCCACTCGTTACCAC
GTCGCAAAAACGCGCGTAATAACTCGACAAAAAGGTGTAAGAATAAAGAGGCTCGTGTGT
TATATCTTTCCGTATATATCGATGTATGCTAAATGGGGAGTACGTCGACATCCAGATGGG
GCTATATTGCTTGTCATGGTTCACACGGAAGTATGCTCACGGCCGGTCACCGGCCGGATT
CTTCCTTCCTGTTCCTGGTTGTCAAGTTGAATTCTAAAACCGGCCAGTCGGCCGGCCGTG
ACCTTACTCGACGAGTTGGAGGTGTTAGATGATGAAGCGTTCCTACTTTCTCGAGGGGAG
CCGTGTTGGTTTATATTGATAGGTCGCCTTGTTGTGCAAGGGATAAATACAAGAGTTTGA
ATACAATAGGAGATAGAGGATATAGAGAAGGAGGTTGAGATTACAACAATATCTTTATAT
TCTAACACCCTCCCTTAATCTCAACCACCTAAATTAAGATTACTCTTGAACTCATCAAAT
GGTCGTGTTGGTAGTGCCTTGGTGAAACCATCCGCCACTTGATCTTTGGAGGGAATAAAC
CGTATCTCAA
