Map Locations of contig_60322 (9025 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_60322

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_71693 2 3010 bp MLOC_71693.1 Available Available LOC_Os04g32920.5, FRAME:-1, EVALUE:0.0, 13104.m03166 protein potassium transporter, putative, expressed
MLOC_71692 1 139 bp None Available Available None





CDS Structure of MLOC_71693






CDS Structure of MLOC_71692






Contig Sequence (9025 bp)

>contig_60322 9025 assembly3_WGSMorex_rbca.fasta
GATCCGAGCGGTGTCTTCAACATTGAACATTGGGTGATCGCCATTGGGTGATCGCAAATT
GATCGCAAATATTGAGGTCCAAAAACTGCCACCACTGCCCTACAGAATTTGTAGAAACAC
TCAATGGTGGTGGACTCGGCCATGCGTCCATAGTCTTCCAGAATATCACTCGGAGCTCCA
TACGCAAGCATCCTCATAGTTGTCGTGCACTTCTAGAGCGAGGTGAATCCAAGTGTGCTG
GTGCAATCCTTTTTGCACTTGAAGTAGCGGTCGAGCTCCTTGATGGAATTCACAATCCTG
ANNNAGAGCTTCCGGCTCATACGATAACGGCGCCGGAAAACTTTGTCGCCGTGCAGAGGA
GCATCTGCGAAGTGGTCGGCGTAGAGCACGCAATAGCCTCCCAGTCGATGCCTCTGCTTT
GCCTTCAGCCAGCCCGGCGCCGAGCCACCTCGCCGTGGCTCTGCATTGCTCGCGAACAGG
CCGGCCAGAGAGGTGAGGACTATGAGGTGCTCTTCATCCTGGGCGTCGGCAGCGTCGCAA
ACGTCTCCTCGTCGTCGGAGTCGATAGGCCAGGCAAATGGCTAAACACCTCGCGGACGTG
GTGGTCGCGTCGCCGCGGGCGTGCCTGGAGCACTGGGAAAAATCGCCTAGAAGTGGGGCC
GGGGGAGGGGCAAATCCGTGGCGAAGCCGACAGGGGAGATAGCCTTTGTAGTGGCGGTAG
GCAGATGGGGCGGCGCCGAAATCGACATGACGGCGGAAGGTGGGGTGTGAAAGGGGCGGT
TTCGGAGAAGATAATGTTGTTTTGTGCCTGACAGGGGGCCCGACGCGTCGTTTTTCCTTC
CGCCGGCGTCCCCGAACACCCCAACGCCTTGGGTTCGGGCTGGGACCGTCGGGGCCAATT
TCAGCCCAAGCGAGCGTAAAACGGCCTCCCGAGGGCGCGGCTGGGCCTTGTTTCCCCGTC
GGCGAAAAAAATAGCACGGGATGCTCTTACGATGGCAACTTAGGTGCCCCCATATGAACA
AAATTAAACCTTAGTTTACTCATTGCTGTATTTTTTAGTGAAAGCATTGCACACACATCT
TACTATGTAAGCTGGTATTGACATTTATTTTATTTATCTGATGTAAAGGTGAGGTACTTG
CTTAAGTCATCCACTATTCATCTCTTACTTTTGCGCGTGCAAGATAGATGCTCTTGGCAT
ATCTTAATAAAAATCCAGCTTACATCTCGATGCCTTGATAGATTAGAAATACTTATGTAC
GCCGACCAGGAGAGGCCAACCAGGGAACACAATGGCTTACTGTCTATGAACGAGGAAACG
ACATCCTGGCAACTGAAGGGCCTCTCTGATTCGAATCATTCCATGGATCCTGAAACCCGC
AGGATTCGCAAGAATGTGGCATTCTAATATCATGTCATCTTAAATCAATGTTCTACTCGT
ATAGCAGTATGATTTTAACATATTTTGCTAAGATATGATGCACCAAACGAAAACACTAGT
AAATGAGAACAAGGTAGTGGGAAAAAAGATATGAGCCTTGCTTATGCCTGGGAGGATACA
TTCAAACTTGAGTTGCAATATGGACCTTACATTTAACACATTTAGATGTACATACAGAGA
AAGTGGAAAATGCATTAAAACCTTGCAACCAAAAGAAAGAACACCCCTCCCTACCCAACC
TGCCTGCACCTGATCTGCATGTCTCCTTATTGAATCGACAATGGCACTTTGCCCTCCCAA
ATCAACGCCATGCACCAGAACCATCACATCACATGCATGCTTGGGGTGAACATGAACTCG
ATCGATCGATCGATATCGATGACTATATCTCGTATGTGATCCCGACTTTGAGCAGCTGAT
CTTTGGGAATGGCCAGCACCTTGTGCCCCTCCGTCAAGTTCTTCCTCAAGAACGTGTAGA
CATGGTTCACCACGATCTTCTTCAAGATGGAGGACTTGGCCTCCGCCGTCACATTGGCCT
CCCCCATCAGATACACCATCCCTCGCTCCACCTCTCTGTCAATCAGCTGCTTCTCCTCCT
CCACCGCCAGGCTCGTATGGAAGCTCATCCTCCCTGAGGCTGAGTGGCTGCTCACCCGCG
CTTGGCCTTGGACCGCCTCCTCGCTGTGCACCGTGGATCGCCTCGGCCTCGCCAGGGCGT
CCGAAACATCGCCGGCGCCGCCGCTCTCCTCTTGGTCCTGCACGAGCGCGAACGCGCTCT
CTTCTTGGATGAACATCTTGAGCCTGTCCACGAGGAAGGCCGCGAACTCCTTGGGCTCCT
CCAGCGTGTCGCTGTACCCGTACCGCGCCACGCACCGGAACATCCGGTGCTCCCTCGGCC
CGACCTGCCGGAAGATGAACCTCTCCGTGGGCACCACGCGCGAGATGGGCAGGTGCTTGA
TGGACATGAAGATGAAGATGGAGTGCACGGACGGTATCTTCTGGATCAGCCGGGGGAACA
CCGGCGGGATGCCCTGGACCAGCTCCGTGTACAGGAGGCCCACCCCGGGGATCCGCCGCA
CCTCGTTCTTCTCCAGCAGCATCGTCATCTCGCTGATGGGCACGATGTGGTCCAGCTCGT
ACCAGTACCTCTTCACCTGGACGTAGTGCCACGCCGCCATCAGGCTCATCACCACCAGCG
CGAAGCAGATGGGGAGGTACCCGCCTTCGATGAACTTGGACATTATGGACGAGAGGTAGA
TCAGCTCTATGGACCCGAACACCACGTAGAAGAGCATGATGAACATGACGTGCTTCTTCC
ATATCAGCAGCATGACGACGGTCATCAGGTGGGTGGTGATCGCAAACGTGGTCACCACGC
AGATCCCTGCGCATAACCAACATCAGGTCAGACCGTCAGATGAGTAAACATGTTCAGCAT
ATACAGCAGCAGCATCCCACTGAAAAGCCAGACACGAATTAGGCCTTATCCTTGGCTGGC
TACTTACCGTAAGCATGGCCGATGCTGGTGGTCGTCCGGAAGGCGACCGTGACGACGATG
CTCGCCAATCCCATGAGGAAGTTCACTTCAGGGATGTACACCTGCCCCTCGTACTTGTGC
GAGGTGTGGATCACTCGAACCCTTGGCATGCAACCGAGGGACAGGGCCTTGGAGAGGATG
GCAAACGCACCGGAGAGCATAGCTTGGCTTGCTATGATGGCAGCAAGAATGGCGACGATG
AAGGTTGGCCAGAACATTGGTGCTGCACAAGGAAGCGTAGACATGGAGAGTTGATCTTAC
TTGTGCTATATGCTCTTACCAAATGCATGCACATTCTACTCCCTAAAGCAGCAAAACAGC
AGTCTTATAATTAAATAAAAAAAAACTCTGTACCTGGGATGGATCTATAGAAGGTGTTTG
CAACATTGTCTGGGAATTTCCTCAGGTAAGCCGCCTGCCCAATATAACACAATGCCACCG
ATGGGAACAGGATGCCGTTGAAGCTGAGCTGCAAGTGTAAGCACAAAAACCATTGTAAGA
TGAGATCCTTCTGTTCTGAACTCTTGAGGGAGGCCTCAGGAAAATTTTATTACTTCTGAA
AGCTTATATCTAAAGTTAAAGTCGTTACCTGAACAGCCCTGATGTTGAAATGTCCTAGGT
CAGCAAACATACCTTCTGTGCCTGTTACATATGACAATCACTCAGTTAATTCAGATTACA
GTTCTGCAGGCTATAGTTTGCAACACAACCACTTGTCAGTTCAAAATTTTCAGTTAGAAA
TTAAGGTTACCTGTGACACACAAGATAATCCCACCAAGTGAGACCCATCCACTCTTCCCA
TTCCTTATGAAGTATTGCACTATATACATCGGATTGAAGGCCCGCAGGACACCGATGTCG
TGAACAACCAGGTTGTACATCCCGATGCCGGCAATTAGAAGGAACCACACTGAGATGACC
GGCGCGAAGGTGTACCCGACCTTGTCGGTCCCAAAACGCTGGACCGAGAAGAGCATGAAC
AGAATCGCCACCGAGATGAGGACCACTTGTGCTGCACAAAGAACAAGCGTTAGATGTGTT
GGACTGATCGGCAGAGGGTAGAAGAAACAATCAAAAGTTGTTACTAATCCTTTTTCACAT
ACTCTGAGTCAAGCTTGGCGCCTTTTCTCTGATCCCACTCACTGCAGACAGCACTGCAGC
ACATCCATGAATAAAACATTAGTACAGTACTGTGGAGTATATTTGTTGCAGACAGCACAA
GATGGAACTCTTGGCTCTTCATTTTACCAGAAATTGCTGGGGTCAAGGTTCCATCGCCTA
TCACCATTGATGTGCCGAGGATGGTGAGGGTGAAGAGCACAATCTTGGCTGCCTTGCTTG
ACTCAAGCTTCTGCTTCAACCATTGCGCCCTCTTGAGCTGCGAGTTTGGTGCCTCTATAT
GGTAATTGGACACCGCCGCATCCTCTGCCTGTTGATCAGGGATCAGCCTGATCTTTGCGT
ACCGAGATATCAGCGAGTAGAGCGCAAACGTGCCACCTACAACACCAGCACCAGAGTTTC
TTGTTACTTGGTACTCCTGTGCTTTACAAAAACTGGTACGACAGCAAGGCCCAGGTTTCA
GAGAATGAGCTTACCATCTCCATTGTCGTTGGCGTAGAGCACGATAAAGACGTACTTGAG
CATGGGTATGATGATGAGGGTGTAGAGGATGAGCGAGAGGACGCCCAGGAGGTCGTCCCT
GTTCCTGATGCCATCCGGGAAGGTACTGGAGTAGACGTAGAGCGGCGACGTCCCGATGTC
GCCGTAGATGATGCCAACGCTCTGGAAAGCCAAGCTCAGCGTCCGCATCCAGCTCACCTG
CACCCATCACCAGTAGCAAAGTAACCCAGAGTCAGTCAGTTTGCTCTGTCTATCTGTCTG
TCTGCCATAGATACAACATTGCTGCAACAAGCATGGTCGCCAACCAAGTCGCGTCTGCCA
GAGAAGGAACCTACCTGAGAGCCATGGTGCTTTGAGTCGGAGACCTTCTCCGCGTCGCCG
AACAGCGAGTCGTGGCGCTTGAGCGGCGCGGGCGTCTCTGCGCTCCGCGGGTCCTCGACT
TGCAGCGACATTTCTGGTCGGTCACCTGCTGCTGATGCTCAAGCTGGACGCCTCCGAATG
CCTTGGAGGCCTCCTTCAGCTCTCCTTATATGGCCTGCGTCAATGGCTCCAATACTTTGA
GATGGTAGTGGTGTGAAAACCAAGTAAGTATAACTTTTTTACATTTCCAAGAATTAAGAG
GCTGGCTGGCTTAAAACCGGCGTGGGAGCATTGAAACTAACCAAAAGAATGATTCCTTTG
TTCCTAAGCAATATACTCAAGATCCATTGGGTAGCAAGTGCAGGCGACTAATAAACCACT
ACTACTCAAGATCCATTGGATAGTATTAGTACTATAAATGTAACGAGCGGTGCAATGCAT
GTTTCCATATTCTAGTCAAAATTGTTGCTGTCAATTTTTAGTAAGTCTGCCTTGTGATCG
TGTACTGGAGTAGTACCATTAATATAATCTATACGAGATCAAAATTACTCTCTAGTTGTT
GGATCAGCCTACCAGTGGGGAGCAGGCTCAGATTTATGATATGATATCATGTGCATGTGA
ACATTTCCTTTGAAGATTTTTTCATGAATTGCACTGATAAACAATCAGCAAGCTTCTCAT
GTCAGTCACATGGTACTACCTTTTTCAAAAAACATCCATATAATTGAAGCACAAGTGACC
TTAGCTCTGTTTTTATACAATAATAATAGTTGAAGCAAATTACTTTGTAGTACTGAAGAA
GAATTGATGTACGCTAATTAGTAATTACCACTCTGTTCCGGTCCCCAAATTGTTTTCAAG
AATATCTATGGCTGTCATCTATGCATGATTATGCTGCTGAAGAAGGGTATAATAACAGAG
GGATACTCATAACTCGTATAAATAGTTTACTCATTTATATTCTTTAAAAAAAATCATTTA
TATTCCTGTACAAAAACTAATATATTTTCTAAAGAAACTGTGTTGATTTATGACCTTCAA
ACCAGAGATACACCAACCCTGGTTTGAACCCATGCACGAAGATTAGCAGTATACAATACT
AGTACTAGCGTGGCATGATGCGAGGTACTCCAGTTTTCTACAATTTTCCGCAGATCTTCT
TGGGTCATGCACACCGCCCTCACTCACTTCCAAAAAAATAACAAACCCCATTAGTTTAAG
TGGTAATCAGATCACAAATCAAGCTCATTGGCCACACCCTTGACCTTCCGAGCCCCCACC
GTCCACACCTGATCTACTACCGGCAAGTGTTACTCTTGGAACGAATCTTGAGTACTACGT
GCTGCTGACATGTGTGCCCAGCTAAGTTAAAATGAATTAACACCACGTACTCTGTATCAG
CAAACCTCTGTTAAGAGTAGATGCTACTATAACCCTCAAGAAGAAAACAAGGAAGCAGTA
GACGCATGGTTGGAAAACCAAAACAGGAAACAGGAGACGAAGCTCTCCCTTCTTTGTTGG
AAAAAGAAGCAGATGATGCGTGCTCCTTGCGCAAGAGAAACAGGCCATGGGAGGATGGGA
TGGCGAAGGGGGTGAGTGGCCGAGCACCTACCTAGCTAGGCGACGCAGGGCCGGCCGGCG
GAAGAGGACCGGCCGGACAAAAGCTGAGGTGGAAGTACCAAACAAAGGTCTGCTGCCGCT
CGCACTGCGCTGTGGCAGAAGGGGCTGGGATGGAGTCAGAGAGAAGGCGAGGAGGCCCTG
GTTTAAATAGAGGGATCGGCTGGGGCATGCAGCGCATTGCAGTGGGGGCCAAAACGAGGA
GGAGCGGCTCGGATTTTGGAGTCCAGGATTCCGCGGAAACCATAAAAGAATTGTGAATTA
TGTGCAGTGCGCTGTGGATTATTGGGCAGCTTATTTTGAACAGAGGGAGAAGAGAGCGGA
GAATGGGAGACCGCGGGCAGAAATGCATCCTCGCCAGCCAAGCCGGTCTTCGGCCGCCAA
AGACTTTCCGTTTCCCTTCTCTGGGATCTACCAGCTGCTTCGCCCCGTGCAATAATTGAT
GCCGAATCCCATTGTTTTGGTGCCGTTCCTCTCTTTTGTTTTCTTCTTCTTTTTCTACAG
CCCTATGCTAAAGGGTAACTTGGCAGCTTATTTTGACGTCGCTATACATACATAGATTTA
CATGGATTTTAGAGGCATGTGTATTTTAATTAGAGATTAAGGAGGATGAGGACCTCACCC
CCTTGAAAATTAGAGGAAATAGTTAGTTAGAAAGAAAGAATCATAATCAACGTGTAACTT
CGTGTAAGTCTTTGTACGTTTAGCATTTTTGGTAGTGCCGTATCCCTGGTTTGCTACTCC
CCATTGTTTGATTACATATTTGACTAGAAAAATGTTAATGCATTTCGTCAAAAGTTATCT
TGTTGAATTCATATTTGAATGTGGTTTCTAATGATATTATTTTTGTTACATATAATATGT
GGTCCTTATTCATTTCTGTGAAAACCAGGGAGCCTTTGGTTATTGGGTGTGTCCGATATG
AGATGGTAGCTCAGGTTATCTTCAACCGATATGGATGGCGGCATGCTAATAGGATTGGAC
CATAGTACTGTTTACTGATGGATTTAGTCGGTATTGGTGTATGATCGCCGTGTAACTCTT
TTTCTTAGTTTTTTTCCTTTGGTTTCTCGAACTACTTTGTATTTCATTCAGACTACTTCA
TTATTAATAAAATGGCTGCATGCATCACTCGATGCAGAGGCCGGGACGATGCCTCCTTTT
CGAAGAAAAAAAATGATCAAAATATGGCCACGAATACAAGAGTGACTAGTAAACCATGAT
CATTCTCTAGTCTAGAAATAAGGATTTGTTTTTTCTGGGTGTGAGCCAGATGTCGCGCCT
GAATTGGTTCGTTGAGTAAAAGTTTCTCATCAGCTCCAAGTAGCCATAGCTCCGCTGCTT
ATCACCATCGGACACTTCATCGTGATCCTCTCTAGTCTTGTGTAAAGAAAAAGGTTCTAG
TGTTTCCGTCCCCTGCACCCAGCAAGCCCTGGAGTGCAATCTGTCAACAAAAAAGATTAC
CGCGAGAAAAGACACCAACCACTGAGTCTGACTTGAGGATAGCTGCGAAGCTGAACGCTA
CTCCTCAATTCGCAGTAACTAATCGCCAGGAATTCATTTACTTTTTCCAGCAAGTGGAGC
GACAAACTGTCTTGCAGCTTACTAGCGAATGACCTCCACTTCATGTTTCTTGTCGTTTTT
CTCCAAACGAAATCAAGGGAGATCCTATCAAGCATTGTCCAAACTCCAAACTAAGGGTCT
TTTGGGGCTTATACATTACAGTCTCACCCTGCTTGTCATAAAGTGATGAAACGGACTAAA
TCATTCAATTGATGTTTTTTGCAAAAAATAATAATAATACCAGAAACACGGTGTCTTTTG
CAAACAAAAAGAAAAGAATTAGGCATTTTTCTGCAAATCTAACCTTAAATGTGGTGGTTT
TCTACAATTAACTGTCTTTTATGATGCATTTTTTTGCCGCTTTGCATCTATCACTAAGTT
GGGTCTGACTAAGTAAATACAAGGCAAAATCGTGCTCAACATGAAGTTTGGTAGGTTGAA
TATTTTTTGATAAGGAGGAGGATGGCGACGCCAAGTTGTAGGGCGTCGACAAGATTCAAA
TCCTCTCATTGTGGGAGGCCGAGGTCGAGTATCGTCAGACCATGGTGGAGAAGGTCGAGC
ACCATGGCGCCAAGGCACAACTCGACGCCGAGCGCACGGACGCCGCCGTCTCTACCATCC
TCGCCAACCCTAAGACGGAGCCCAAGCACCATACCATCGAGGAATCGGTGGCGGATGAGT
GCGAGGACGCCGTCAACCACTTCATATTATCAATTTTCAAGCTCGAAGACACTAACAACG
ACAATGATGAGTCGATGGCGTAGTGTTGGAAATATGTCCTAGAGGCAATAATAAATTGAT
TATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCATGTTAGAATTGTATTGAT
TGAAAACTCAAATACACGTGTGGAT