| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_60296
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_71683 |
4 |
2246 bp |
MLOC_71683.2 |
Available |
Available |
LOC_Os06g21330.1, FRAME:-3, EVALUE:0.0, 13106.m02280 protein ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed |
CDS Structure of MLOC_71683
Contig Sequence (4566 bp)
>contig_60296 4566 assembly3_WGSMorex_rbca.fasta
GAAGGTTAAGTTCTTTCATTGGCTCGTCAACCAGGACCGCTGCTGGACTGCAGAGCGTCT
CGCCCGCCATGGCCTCCCACACCACCCTCGGTGCCTCTTTTGCGATCAAGAGCCGGAAAC
GATACGGCACCTGCTGCTCACATGATCCTTCGCGAGGCAGACCTGGCATGAGGTCATGTC
CTGGCTGCGCCTACCGGCTCCGGTGCCAGACCAAGATGCCACGCTCCATGCCACGCCACA
CCCGCTCCGCAAAGCGCTGGCTTCGGTAGCACTCCTGGTGTCGTGGATGATCTGGAAGCA
TAGAAATGCGTGTGTCTTTGACCATGTAACCCCATCGCTGGTTGAGCTCGCTGACAAGAT
CAAGGACGAATCCCGAAGTTGGGCTAAAGGGATTAGGATCACCCTGCCTCCTTCTTGGGA
CGTACATTGATCTATATGTAACACCGATGTACTAGCCTCTTAGGAGGATGTATCCCTCTC
CCTTTTTAATGCAATGAAACGCAAAGGCTTTTTTGCGTTTTCTCAAAGAAAAAAAACAAA
CAAAGCAACGCCGAATGATGGCCCGTACAGCCAGATGTTATCACCCTCAAGCAAAAATAG
CACTGTTTGTTTGTTTTAAACATCGGCCATTACGTCTGCTAAAACAATAAATCAGCTACC
ACCATTGAGATATTGTGCAACAAATCAGGAACATGCTAAATCTTCCAAAAAGTTCCATTC
CAGTGTAAGAAGTATCCATTGTAAAACAAAGGGGAGACATATAATACAGAAATTCTACAT
CAGCCCCTTACAGCGAAGACTACAAAAGGAAGAGCTACACAAGAAAGGTATGAAGTTCCA
GTTCTCAGTGGAGGGCAGTATTGTCATCATCACAGGCTTCCCGCTCCGCAACGAGCATAA
GCATCTCCAGTCGCCGGTCAAACAGCGCTGCACTCTGATCTCTCTTGTCTAGCTCAGCAG
CCTCTGCTTCCAACCATTTCTCACGCAAGTCATCGAGAATATTGCCTTGGTCAGTGTTCC
CCGCAGCCCCGGGCTGGCTGGGACGAGTCGTTCGTAGTGCGTCGTTTGCAGATGGCGGTG
GGAGTGTCAAGAGCAAAGCCCTGAACTCTCTTATGTCCGCAAACATCTCGAAATTGTAGG
CAATGATATCCAGGCAGTACTCCCTTATTTTCATAACCCCATAACTGCATTTGGAGAAAA
TATTGACCTCAGCTACAAATTAGATAATACAATGGCAGACCATCAAGCATGACAAGCACA
TACATGTCTGACAAGATCAACCAATGGCACAGCTCTGCAGGTGAAACATGTTCCAGATTT
GGTAACAGTAAATCAGCTACAGCACGCCTAAGGGGAAACAGCAAGTATCTCGATGCGACA
TCAAATAATTCTTCAGCCTGAGATAGGTTTACGTCAATTTAGTTTCGCAACAAACTGAAG
TGACTTTGTAAGAAGAGGTGACTGGTTTTGTACTCTATATCTTACCAGGGTTGGATCCAT
ATGCTCCAGATTGTCAGTATACCTAAAATTAAGACAAGCAGGGAATAAACCAGACAACAG
CAGTAACAATAACAATAATGGTCAAGCAAGAAAAGGTGTAAAGGGATCTTACATGTATTC
AAGCATCTTTTCAAATGCTTCAATACTCAGGTCATGCTCCTCAAGAAATGGTAGATCCAG
AGATTCATGCACTCGATTGTTACCTTCACGGAAGTCCACTGTTCGAGATAGTCTGGTCTT
AAAATACTCCGACCTTGAGGCTAAAATCACCTGATGGCAACGAAAGACTCTATCATCCAC
TTTTACAGCAAGATCAGCAAGATCATCATCCTTCCAGTTTCTGCACATCTCATTCGGTAC
AGTTTTCTTAAACTCTTCTTCTCTTGAATTGGCTAGACATTTCTGCAGAACACGCCACAA
TGCTGACGGAAGACGATCTTCCAGTGGCAATGACTGCCCGAGTAAAACAAACCGTCTCTG
ACTCTGTGAATTTTCCAAACCCAACTTATTTGTTGACTTATACAGTGCAAACCTCTGATG
TAGAATTTCTTTATCGATTGACTTATGCAACTCCTCACACTTGGAAACTTTGCAAGTGCG
TGACAAAATTTCCATGTCATCCACTGGAGCCTCGAGTCTATCGGCATAGAAGAAATGGAT
AAGGTTGTACAAGGTACCAAAAGATAATTTTTTATTACAAAATCTCACTTCCTTCCTGTG
TTTCCAGTCTGTCTCGAATTTCTTTTCAAAGAAGGGCGATCGGGCACAAAGGATGACCCG
ATGAGCTTCAATAGGTTTTCCATCCACGTAGAATGTAATATCCGGGGGGAACAGACTGCC
AGTTGATGCATCATCTGTTGGCCCAAATCCTGCACAAAAGGTGTTGACATAATACTTATT
AGTTGTATACTCTTCCACAAAATAAGCGAAAAATATAAAGCTGCTATTTTCGCATAACCA
CTTTCACAAAATGAGAAAGTTTTATACTACAGAAAAGAGAATCAAAGGAGTATGGTATCT
CAACAATATCTTACATATGCACTGAACCGCTGTTGTTCTTGAGAATAACAGTGCACATTG
TGCCAGCTCAAATAATTCAAGCAGATATATAATTTTCGTAATGGAATTGGTAAAGCACTA
GTTGAATCGGTTACCCACGGTGCACTTTAATGTGCAATCTTTCCGGTGACATACAATATA
TGCAATAGTGGTGTGAATGGTACACAAATTAGATGATTTGAGGATTGGCATCCACAAGAT
CCAGTTGCATTTGCAATCCAGGCGACAAGCAAGCCAAGACGCTGCTGACCTTCGGCTTCA
GCGAGGGCAGCGGCTTCGGCGGTGGCGCCGTCCTGGAGCAACATCTCGAGGTAGGCGGCG
CGGTTGGCGGGACAGGCGAGGAAGGTGGTCCGCAGCGCGGCGGGCAGCGGCGCGAGCGGG
GGCGGGCGCGCCTCGAAGGACGTGAGGAGCCTGCGGAGGTCGAGGTTGAGCGCGGCGTAG
TGGCAGCGGTCGCCGTCGAAGGTGCGCTCGGCGCAGACGGCCCCGGCCTCGAGCAGCATC
CGCGCGGCATCGGCGTGGCCGGCGAGGCAGGCGTAGTAGAGCGCGACCGAGTCCCAGCGG
TCGCGCGCGTTGACGTTGGCGCCGGCCTCGAGGAGGAGCGCCAGGCGGTCGCAGTCGCCG
GCGCGCGCCGCCTCGAAGAGGTCCCCCGCGGGGACCTTCTTCAGGGGCACCGTCGGGTGG
AGGTCCTCCGGGTCCAGGTCGAGGTCGATCTCCAGGCCCATGCCGTCGGGCGGCGGCGCG
TACACCATCTCTTCCGGGGGGACTTTTGTTTCCTTTTGGTCTCGCGGCGGTCGGCGGGCG
GCGGCCGGCCGTGAATCGCGTCGCTCCACGGAACGTGGGAAATGGACTTGTCCGGACGGA
ATTCCTCCACCTGCTCGACCGGTTCCTTCAGGCACGTTCTCTGCCTGTGGTCCGGGAGGC
CGTTGATCTTGATTCTGTGGACGGTCAATATTGCTCCCACCTCCTCGTTCCTAGATCCGC
GGGAAATAGCTACAGGAAACGGCAGCTCCGGACGTCCATCCCTCTCCAGTGACAACCTAG
CAGCGGCCATATCCAGGGCGCCCTGCACGAATTGCCGGGAGCTCCTACTCGACGCATTCA
GCGTCGCTTACCCCTCCTGGCGCTCGCGCGCGCCATCTACTGGACCGGCCCAGTAGCTAT
TTCGACGTCAAAAGAAAAACTATTCTTGAACACTATACATAAGAGTTGGGATTCGAATCC
ACATGTTAATTGTGGTAGTCTCAGCACAACAACCACTGCGACAACACGACTACGTGATAC
AGAATCTGCGGTCACCTACTTCCTTTTCCCTCTAGCTAGGGGTTTATCCTCTCGGGGCGA
CTGCGATCGTCGTCGTGTTCCACCGCTTTCTCTTTGTGATCGTGGGCGTTGCGGCGCTCG
CTGATGTGAGGGGGGGGGGAGGGGGATGCCGAAGGAGGATGACTTAAGGTTCCTTGCAAA
ACCCGCTCTGTTTTTGATCGGGTAAGGTTTTGAAGTTTTCATGACGACGGCCGGATCGCA
AGGGTCGGACTTTGGTCCCCCGGACATGGACGATGTGGCAACGCGGATGAGGGAGCTTGG
ACTCCGGAAGGAGGACCTAGATAACGTGTTTTTTGACAAAGATGTTGCTCCGTCGGAAGA
GGCTCGCTGGATTGCGCTTGCAGGAGTTCACTCGATCAAGACCTATAGCCAATTTTGGTT
TTCAGGAACATGAGATCAGCATGGAATCTAGCCTAGGAAGTCCAATTCAAACATTTGGAG
GAAAATCTATATACCATGCAATTTTCTTGTTTGGGAGATTGAGAGAGGGTCACACACGAT
GGTCATTGGCACTTTCGTGGGGACGCGGTAATCCTTAAAATCTTTAACCCGAAAGAGAAG
AGAGAATAGAACCCAGAGTATAGAAAAGGAGTAAAAGATAATAATACCACCAAAATGAGA
TGCGGGCCTGTAAGCCACAACATCAAAATTAGTAAGTTTCTCAAGTACTAGACTCAACTT
CGGCCA
